| United
States
Patent Application | 20070092549
|
| Kind
Code
| A1
|
| Tuszynski;
Jack A.
; et al.
| April
26, 2007
|
Water-soluble
compound
Abstract
A water-soluble magnetic anti-mitotic compound with a
water-solubility of at least 100 micrograms per milliliter, a molecular
weight of at least 150 grams per mole, a mitotic index factor of at
least 10 percent, a positive magnetic susceptibility of at least
1,000.times.10.sup.-6 cgs, and a magnetic moment of at least 0.5 bohr
magnetrons, wherein said compound is comprised of at least 7 carbon
atoms and at least one inorganic atom with a positive magnetic
susceptibility of at least 200.times.10.sup.-6 cgs.
| Inventors: |
Tuszynski;
Jack A.; (Edmonton, CA)
; Greenwald; Howard J.; (East Rochester,
NY)
; Curry; Stephen H.; (Rochester, NY)
; Goss; Kendrick; (Brighton, MA)
|
| Correspondence
Name and
Address: | BUCHANAN, INGERSOLL & ROONEY PC
POST OFFICE BOX 1404
ALEXANDRIA
VA
22313-1404
US
|
| Serial
No.:
| 063441 |
| Series
Code: | 11
|
| Filed: | February 23, 2005 |
| U.S.
Current Class: | 424/423;
427/2.24; 514/449 |
| U.S. Class at
Publication: | 424/423;
514/449; 427/002.24 |
| Intern'l
Class: | A61F 2/20
20060101 A61F002/20; A61K 31/337
20060101 A61K031/337 |
Claims
1. A process for treating a stent
comprising the steps of a. applying a magnetic field to a patient such
that said magnetic field acts upon a stent wherein i. said stent is
disposed within a lumen of said patient, said stent having a first
magnetic moment, said stent being further comprised of means to change
said first magnetic moment to a second magnetic moment, ii. said stent
is comprised of a substrate wherein said substrate is comprised of a
biologically active substrate and a magnetic moiety wherein: 1. said
biologically active substrate is an anti-mitotic agent, 2. said
magnetic moiety is covalently bound to said biologically active
substrate, said magnetic moiety having a third magnetic moment, iii.
said third magnetic moment and said first magnetic moment are such that
there is an attractive force between said stent and said substrate, iv.
said second magnetic moment and said first magnetic moment are such
that there is a repulsive force between said stent and said substrate,
b. in response to said magnetic field, said first magnetic moment of
said stent changes to said second magnetic moment, thereby causing said
substrate to be repelled by said stent.
2. The process for treating a stent as recited in
claim 1, wherein said stent is further comprised of plaque.
3. The process for treating a stent as recited in
claim 2, wherein said biologically active substrate reduces the amount
of said plaque.
4. The process for treating a stent as recited in
claim 3, wherein said biologically active substrate is a taxane.
5. The process for treating a stent as recited in
claim 4, wherein said taxane is a paclitaxel.
6. The process for treating a stent as recited in
claim 5, said magnetic moiety is comprised of a iron atom with a
positive magnetic susceptibility of at least 2.times.10.sup.4 cgs,
7. A process for treating a stent comprising the
steps of a. applying a magnetic field to a patient such that said
magnetic field acts upon a stent wherein i. said stent is disposed
within a lumen of said patient, said stent having a first magnetic
moment, said stent being further comprised of means to change said
first magnetic moment to a second magnetic moment, ii. said stent is
comprised of a substrate wherein said substrate is comprised of a
biologically active substrate and a magnetic moiety wherein: 1. said
biologically active substrate is an antimitotic agent, 2. said magnetic
moiety is covalently bound to said biologically active substrate, said
magnetic moiety having a third magnetic moment iii. said third magnetic
moment and said first magnetic moment are such that there Is a
repulsive force between said stent and said substrate, iv. said second
magnetic and said first magnetic moment are such that there is an
attractive force between said stent and said substrate, b. in response
to said magnetic field, said first magnetic moment of said stent
changes to said second magnetic moment, thereby causing said substrate
to be attracted to said stent.
8. The process for treating a stent as recited In
claim 7, further comprising the step of administering a replenishment
substrate to said lumen, wherein said replenishment substrate is
comprised of a biologically active substrate and a magnetic moiety
wherein; a. said biologically active substrate is an anti-mitotic
agent, b. said magnetic moiety is covalently bound to said biologically
active substrate, said magnetic moiety having a fourth magnetic moment,
c. said second magnetic and said fourth magnetic moment are such that
there is an attractive force between said stent and said replenishment
substrate.
9. The process for treating a stent as recited in
claim 8, wherein, in response to said magnetic field, said first
magnetic moment of said stent changes to said second magnetic moment,
thereby causing said replenishment substrate to be attracted to said
stent.
10. The process for treating a stent as recited in
claim 9, wherein said stent is further comprised of a drug eluting
polymer wherein said substrate is disposed within said drug eluting
polymer.
11. The process for treating a stent as recited in
claim 10, wherein said replenishment substrate becomes disposed within
said drug eluting polymer by the action of said magnetic field.
12. The process for treating a stent as recited in
claim 11, wherein said replenishment substrate and said substrate have
the same molecular structure.
13. The process for treating a stent as recited in
claim 12, wherein said lumen of said patient is a blood vessel.
14. A process for treating a stent comprising the
steps of a. applying a magnetic field to a patient such that said
magnetic field acts upon a stent wherein i. said stent is disposed
within a lumen of said patient, said stent having a first magnetic
moment, said stent being further comprised of means to change said
first magnetic moment to a second magnetic moment, ii. said stent is
comprised of a substrate wherein said substrate is comprised of a
biologically active substrate and a magnetic moiety wherein: 1. said
biologically active substrate is a taxane, 2. said magnetic moiety is
covalently bound to said biologically active substrate, said magnetic
moiety having a third magnetic moment, iii. said third magnetic moment
and said first magnetic moment are such that there is an attractive
force between said stent and said substrate, iv. said second magnetic
and said first magnetic moment are such that there is a repulsive force
between said stent and said substrate, b. in response to said magnetic
field, said first magnetic moment of said stent changes to said second
magnetic moment, thereby causing said substrate to be repelled by said
stent.
15. The process for treating a stent as recited in
claim 14, wherein a. said magnetic moiety is comprised of a iron atom
with a positive magnetic susceptibility of at least 2.times.10.sup.-4
cgs, and b. said substrate has a positive magnetic susceptibility of at
least 1.times.10.sup.-3 cgs.
16. The process for treating a stent as recited in
claim 15, wherein said magnetic moiety is further comprised of a
hydroxamic acid.
17. The process for treating a stent as recited in
claim 16, wherein said hydroxamic acid is a ferrichrome.
18. The process for treating a stent as recited in
claim 16, wherein said hydroxamic acid is a ferrioxamine.
19. The process for treating a stent as recited in
claim 15, wherein said magnetic moiety is a siderophore.
20. The process for treating a stent as recited in
claim 19, wherein said siderophore is a catecholate.
Description
CROSS-REFERENCE TO RELATED PATENT
APPLICATIONS
[0001] This application is a continuation of
applicants' co-pending patent application U.S. Ser. No. 10/923,615,
filed on Aug. 20, 2004 which claims priority from United States
provisional patent application U.S. Ser. No. 60/516,134, filed on Oct.
31, 2003. The entire disclosure of each of these patent applications is
hereby incorporated by reference into this specification.
[0002] This application is a continuation-in-part
of applicants' U.S. patent application Ser. No. 10/808,618 (filed on
Mar. 24, 2004), of applicants' U.S. patent application Ser. No.
10/867,517 (filed on Jun. 14, 2004), and of applicants' U.S. patent
application Ser. No. 10/878,905(filed on Jun. 28, 2004). The entire
disclosure of each of these patent applications is hereby incorporated
by reference into this specification.
INCORPORATION BY REFERENCE OF MATERIAL SUBMITTED ON
A COMPACT DISC
[0003] Reference is hereby made to a Sequence
Listing, a Table, and/or a Computer Program Listing appendix that was
submitted on compact disc. The entire content of this compact disc is
hereby incorporated by reference into this specification.
FIELD OF THE INVENTION
[0004] A water-soluble magnetic anti-mitotic
compound with a water-solubility of at least 100 micrograms per
milliliter, a molecular weight of at least 150 grams per mole, a
mitotic index factor of at least 10 percent, a positive magnetic
susceptibility of at least 1,000.times.10.sup.-6 cgs, and a magnetic
moment of at least 0.5 bohr magnetrons, wherein said compound is
comprised of at least 7 carbon atoms and at least one inorganic atom
with a positive magnetic susceptibility of at least 200.times.10.sup.-6
cgs.
BACKGROUND OF THE INVENTION
[0005] Paclitaxel is a complex diterpenoid that is
widely used as an anti-mitotic agent; it consists of a bulky, fused
ring system and an extended side chain that is required for its
activity. See, e.g., page 112 of Gunda I. Georg's "Taxane Anticancer
Aents: Basic Science and Current Status," ACS Symposium Series 583
(American Chemical Society, Washington, D.C., 1995).
[0006] The aqueous solubility of paclitaxel is
relatively low. Thus, as is disclosed at page 112 of such Georg text,
estimates of paclitaxel solubility vary widely, ranging from about 30
micrograms per milliliter and about 7 micrograms per milliliter to less
than 0.7 micrograms per milliter.
[0007] The molecular weight of paclitaxel is in
excess of 700; this relatively high molecular weight is one factor
that, according to the well-known "rule of 5," contributes to
paclitaxel's poor water solubility.
[0008] The "rule of 5" was set forth by Christopher
A. Lipinski et al. in an article entitled "Experimental and
computational approaches to estimate solubility and permeability in
drug discovery and development settings," Adv. Drug Delivery Rev.,
1997, 23(1-3), 3-25. In this article, it was disclosed that: "In the
USAN set we found that the sum of Ns and Os in the molecular formula
was greater than 10 in 12% of the compounds. Eleven percent of
compounds had a MWT of over 500 . . . . The `rule of 5` states that:
poor absorption of permeation is more likely where: A. There are more
than 5 H-bond donors (expressed as the sum of OHs and NHs); B. The MWT
is over 500; C. The LogP is over 500 . . . ; D. There are more than 10
H-bond acceptors (expressed as the sum of Ns and Os)."
[0009] The Lipinksi "rule of 5" has also
erroneously been referred to as the "Pfizer rule of 5," as is
illustrated by U.S. Pat. No. 6,675,136, the entire disclosure of which
is hereby incorporated by reference into this specification. As is
disclosed in such patent, "To further illustrate the versatility of the
present technique, we also introduce the concept of `anchor` objects.
Anchor objects are molecules situated at the corners of a region of the
drug space that is defined by Pfizer's `rule of 5`. This rule has been
empirically derived by a computer analysis of known drugs, as described
by Christopher A. Pfizer and co-workers in Adv. Drug Delivery Rev.,
vol. 23, pp. 3-25 (1997). The `rule of 5" is focused on drug
permeability and oral absorption . . . . According to Pfizer's "rule of
5", LIPO and HBDON are between 0 and 5, HBACC is between 0 and 10, and
M.W. has a maximum of 500."
[0010] The problems that high molecular weight
compounds have with poor water solubility are discussed in U.S. Pat.
No. 6,667,048 of Karel J. Lambert et al., which discloses an "emulsion
vehicle for a poorly soluble drug." In the "background of the
invention" section of this patent, it is disclosed that: "Hundreds of
medically useful compounds are discovered every year, but clinical use
of these drugs is possible only if a drug delivery vehicle is developed
to transport them to their therapeutic target in the human body. This
problem is prticularly critical for drugs requiring intraveneous
injection in order to reach their therapeutic target or dosage but
which are water insoluble or poorly water insoluble. For such
hydrophobic compounds, direct injection may be impossible or highly
dangerous, and can result in hemolysis, phlebitis, hypersensitivity,
organ failure and/or death. Such compounds are termed by pharmacists
`lipophilic,` `hydrophobic,` or in their most difficult form,
`aamphiphobic` . . . . A few examples of therapeutic substances in
these categories are ibuprofen, diazepam, grisefulvin, cyclosporin,
cortisone, proleukin,cortisone, proleukin, etoposide and paclitaxel . .
. ."
[0011] As is also disclosed in U.S. Pat. No.
6,667,048, "Administration of chemotherapuetic or anti-cancer agents is
particularly problematic. Low solubility anti-cancer agents are
difficult to solubulize and supply at therapeutically useful levels. On
the other hand, water-soluble anti-cancer agents are generally taken up
by both cancer and non-cancer cells thereby exhibiting non-specificity
. . . . Efforts to improve water-solubility and comfort of
administration of such agents have not solved, and may have worsened,
the two fundamental problems of cancer chemotherapy: 1) non-specific
toxicity, and 2)rapid clearance from the bloodstream by non-specific
mechanisms. In the case of cytotoxins, which form the majority of
currently available chemotherapies, these two problems are clearly
related. Whenever the therapeutic is taken up by noncancerous cells, a
diminished amount of thedrug remains available to treat the cancer, and
more importantly, the normal cell ingesting the drug is killed."
[0012] As is also disclosed in U.S. Pat. No.
6,667,048, "The chemotherapeutic must be present throughout the
affected tissue(s) at high concentration for a sustained period of time
so that it may be taken up by the cancer cells, but not at so high a
concentration that normal cells are injured beyond repair. Obviously,
water-soluble molecules can be admistered in this way, but only by
slow, continuous infusion and monitoring, aspects which entail great
difficulty, expense and inconvenience."
[0013] It does not appear that the prior art has
provided a water-soluble anti-mitotic agent that is capable of solving
the problems discussed in U.S. Pat. No. 6,667,048. It is an object of
this invention to provide such an agent. In particular, and in one
embodiment, it is an object of this invention to provide a magentic
anti-mitotic composition that can be directed to be more toxic to
cancer cells than normal cells. Furthermore, and in another embodiment,
it is another object of this invention to provide a delivery system
that will provide a chemotherapeutic agent at a high concentration for
a sustained period of time but not at such a high concentration that a
substantial number of normal cells are injured beyond repair.
SUMMARY OF THE INVENTION
[0014] In accordance with one embodiment of this
invention, there is provided a water-soluble magnetic anti-mitotic
compound with a water-solubility of at least 100 micrograms per
milliliter, a molecular weight of at least 150 grams per mole, a
mitotic index factor of at least 10 percent, a positive magnetic
susceptibility of at least 1,000.times.10.sup.-6 cgs, and a magnetic
moment of at least 0.5 bohr magnetrons, wherein said compound is
comprised of at least 7 carbon atoms and at least one inorganic atom
with a positive magnetic susceptibility of at least 200.times.10.sup.-6
cgs.
[0015] In accordance with yet another embodiment of
this invention, there is provided a compound with molecular weight of
at least about 550, a wter solubility of at least about 10 micrograms
per milliliter, a pKa dissociation constant of from about 1 to about
15, and a partition coefficient of from about 1.0 to about 50.
BRIEF DESCRIPTION OF THE DRAWINGS
[0016] The invention will be described with
referene to the specification and the enclosed drawings, in which like
numerals refer to like elements, and wherein:
[0017] FIG. 1 is a schematic illustration of one
preferred implantable assembly of the invention;
[0018] FIG. 2 is a schematic illustration of a flow
meter that may be used in conjunction with the implantable assembly of
claim 1;
[0019] FIG. 3 is a flow diagram of one preferred
process of the invention;
[0020] FIG. 4 is a flow diagram of another
preferred process of the invention; and
[0021] FIG. 5 is a flow diagram of yet another
preferred process of the invention.
DESCRIPTION OF THE PREFERRED EMBODIMENTS
[0022] The magnetic anti-mitotic compound of this
invention is particularly well-adapted to bind either to tubulin
isotypes and/or microtubules comprised of such isotypes and/or various
proteins that are involved in microtubule dynamics. In the first part
of this specification, applicants will discuss the preparation of a
database of tubulin isotopes. In the second part of this specification,
applicants will discuss certain preferred, magnetic compounds that, in
one embodiment, target such tubulin isotypes and/or the microtubules
they make up.
A Process for Preparing a Tubulin Isotype Database
[0023] Tubulin is a component of microtubules. At
the molecular level tubulin's roles are highly complex. For example,
microtubules undergo cycles of rapid growth and disassembly in a
process known as "dynamic instability" that appears to be critical for
microtubule function. In one embodiment, the magnetic anti-mitotic
compounds of this invention are capable of disrupting and/or modifying
such process of "dynamic instability," either by interacting with one
or more tubulin isotypes, and/or one or more proteins involved in the
dynamics of microtubule assembly and/or disassembly, and/or the
microtubules themselves.
[0024] Both the alpha and the beta forms of tubulin
consist of a series of isotypes, differing in amino acid sequence, each
one encoded by a different gene. See, e.g., an article by Richard F.
Luduena on "The multiple forms of tublin: different gene products and
covalent modifications," Int. Rev. Cytol. 178-107-275 (1998). Reference
also may be had, e.g., to U.S. Pat. No. 6,306,615 (detection method for
monitoring beta-tubulin isotype specific modification); the entire
disclosure of this United States patent is hereby incorporated by
reference into this specification.
[0025] An interesting discussion of tubulin
isotypes is also presented in published United States patent
application 2004/0121351, the entire disclosure of which is hereby
incorporated by reference into this specification. As is disclosed in
this published patent application, "Microtubules are essential to the
eucaryotic cell due as they are involved in many processes and
functions such as, e.g., being components of the cytoskeleton, of the
centrioles and ciliums and in the formation of spindle fibres during
mitosis. The constituents of microtubules are heterodimers consisting
of one .alpha.-tubulin molecule and one .beta.-tubulin molecule. These
two related self-associating 50 kDa proteins are encoded by a multigen
family. The various members of this multigen family are dispersed all
over the human genome. Both .alpha.-tubulin and .beta.-tubulin are most
likely to originate from a common ancestor as their amino acid sequence
shows a homology of up to 50%. In man there are at least 15 genes or
pseudogenes for .beta.-tubulin."
[0026] As is also disclosed in published United
States patent application 2004/0121351, "The conservation of structure
and regulatory functions among the .beta.-tubulin genes in three
vertebrate species (chicken, mouse and human) allowed the
identification of and categorization into six major classes of
beta-tubulin polypeptide isotypes on the basis of their variable
carboxyterminal ends. The specific, highly variable 15 carboxyterminal
amino acids are very conserved among the various species. Beta-tubulins
of categories I, II, and IV are closely related differing only 2-4% in
contrast to categories III, V and VI which differ in 8-16% of amino
acid positions [Sullivan K. F., 1988, Ann. Rev. Cell Biol. 4: 687-716]
. . . the expression pattern is very similar between the various
species as can be taken from the following table [Sullivan K. F., 1988,
Ann. Rev. Cell Biol. 4: 687-716] which comprises the respective human
members of each class: 1 isotype member expression pattern class I HM
40 ubiquitous class II H .beta. 9 mostly in the brain class III H
.beta. 4 exclusively in the brain class IVa H .beta. 5 exclusively in
the brain class IVb H .beta. 2 ubiquitous . . . ." The C terminal end
of the beta-tubulins starting from amino acid 430 is regarded as highly
variable between the various classes. Additionally, the members of the
same class seem to be very conserved between the various species. As
tubulin molecules are involved in many processes and form part of many
structures in the eucaryotic cell, they are possible targets for
pharmaceutically active compounds. As tubulin is more particularly the
main structural component of the microtubules it may act as point of
attack for anticancer drugs such as vinblastin, colchicin, estramustin
and taxol which interfere with microtubule function. The mode of action
is such that cytostatic agents such as the ones mentioned above, bind
to the carboxyterminal end the .beta.-tubulin which upon such binding
undergoes a conformational change. For example, Kavallaris et al.
[Kavallaris et al. 1997, J. Clin. Invest. 100: 1282-1293] reported a
change in the expression of of specific .beta.-tubulin isotypes (class
I, II, III, and IVa) in taxol resistant epithelial ovarian tumor. It
was concluded that these tubulins are involved in the formation of the
taxol resistence. Also a high expression of class III .beta.-tubulins
was found in some forms of lung cancer suggesting that this isotype may
be used as a diagnostic marker."
[0027] The function of certain tubulins in Taxol
resistance was also discussed in U.S. Pat. No. 6,362,321, the entire
disclosure of which is hereby incorporated by reference into this
specification. As is disclosed in this patent, "Taxol is a natural
product derived from the bark of Taxus brevafolio (Pacific yew). Taxol
inhibits microtubule depolymerization during mitosis and results in
subsequent cell death. Taxol displays a broad spectrum of tumorcidal
activity including against breast, ovary and lung cancer (McGuire et
al., 1996, N. Engld. J. Med. 334:1-6; and Johnson et al., 1996, J.
Clin. Ocol. 14:2054-2060). While taxol is often effective in treatment
of these malignancies, it is usually not curative because of eventual
development of taxol resistance. Cellular resistance to taxol may
include mechanisms such as enhanced expression of P-glycoprotein and
alterations in tubulin structure through gene mutations in the .beta.
chain or changes in the ratio of tubulin isomers within the polymerized
microtubule (Wahl et al., 1996, Nature Medicine 2:72-79; Horwitz et
al., 1993, Natl. Cancer Inst. 15:55-61; Haber et al., 1995, J. Biol.
Chem. 270:31269-31275; and Giannakakou et al., 1997, J. Biol. Chem.
272:17118-17125) . . . ." In one embodiment of this invention, the
magnetetic anti-mitotic compound of this invention is used in
conjunction with paclitaxel to provide an improved anti-cancer
composition. Without wishing to be bound to any particular theory,
applicants believe that their anti-mitotic compound targets a tubulin
isotype that is responsible for the drug resistance to paclitaxel.
[0028] The increased presence of certain tubulin
isotypes associated with certain types of cancers was noted in an
article by Tien Yeh et al., "The B.sub.II Isotype of Tubulin is Present
in the Cell Nuclei of a Variety of Cancers," Cell Motility and the
Cytoskeleton 57:96-106 (2004). Constructs of these B.sub.II isotypes
and applicants' magnetic anti-mitotic compound comprise one embodiment
of the present invention.
[0029] The Yeh et al. article discloses that both
alpha-tubulin and beta-tubulin consist of a series of isotypes
differieng in amino acid sequence, each one encoded by a different
gene; and it refers to a 1998 article by Richard F. Luduena entitled
"The multiple forms of tubulin: different gene products and covalent
modifications," Int. Rev. Cytol 178:207-275. The Yeh et al. article
also disclosed that the B.sub.II isotype of tubulin is present in the
nuclei of many tumors, stating that "Three quarters (75%) of the tumors
we examined contained nuclear the B.sub.II (Table I)." The authors of
the Yeh et al. article suggest that (at page 104) " . . . it would be
interesting to expore the possibility of using nuclear B.sub.II as a
chemotherapeutic target."
[0030] It thus appears that many isotypes of
tubulin might be "chemotherapeutic targets" such as, e.g., the "nuclear
B.sub.II" disclosed in the Yeh et al. article, or the " . . . specific
.beta.-tubulin isotypes (class I, II, III, and IVa) . . ." described in
the Kavallaris et al. article (Kavallaris et al. 1997, J. Clin. Invest.
100: 1282-1293) and discussed in published United States patent
application 2004/0121351. It also appears that many isotypes of tubulin
are " . . . targets for pharmaceutically active compounds . . . ." The
process of this invention may be used to identify these tubulin isotype
targets, to model such targets, and to determine what therapeutic
agents interact with such targets; and it may also be used to assist in
the construction of anti-mitotic agents bound to such isotypes.
[0031] As is discussed in published United States
patent application US2002/0106705 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
therapeutic agent that interacts with the tubulin isotype target may
be, e.g., a ".beta.-tubulin modifying agent." One such agent is
described in US2002/0106705 as being " . . . an agent that has the
ability to specifically react with an amino acid residue of
.beta.-tubulin, preferably a cysteine, more preferably the cysteine
residue at position 239 of a .beta.-tubulin isotype such as .beta.1-
.beta.2- or .beta.4-tubulin and antigenic fragments thereof comprising
the residue, preferably cysteine 239. The .beta.-tubulin modifying
agent of the invention can be, e.g., any sulfhydryl or disulfide
modifying agent known to those of skill in the art that has the ability
to react with the sulfur group on a cysteine residue, preferably
cysteine residue 239 of a .beta.-tubulin isotype. Preferably, the
.beta.-tubulin modifying agents are substituted benzene compounds,
pentafluorobenzenesulfonamides, arylsulfonanilide phosphates, and
derivatives, analogs, and substituted compounds thereof (see, e.g.,
U.S. Pat. No. 5,880,151; PCT 97/02926; PCT 97/12720; PCT 98/16781; PCT
99/13759; and PCT 99/16032, herein incorporated by reference; see also
Pierce Catalogue, 1999/2000, and Means, Chemical Modification of
Proteins). In one embodiment, the agent is
2-fluoro-1-methoxy-4-pentafluorophenylsulfonamidobenzene (compound 1;
FIG. 1C). Modification of a .beta.-tubulin isotype at an amino acid
residue, e.g., cysteine 239, by an agent can be tested by treating a
.beta.-tubulin peptide, described herein, with the putative agent,
followed by, e.g., elemental analysis for a halogen, e.g., fluorine,
reverse phase HPLC, NMR, or sequencing and HPLC mass spectrometry.
Optionally compound 1 described herein can be used as a positive
control. Similarly, an .alpha.-tubulin modifying agent refers to an
agent having the ability to specifically modify an amino acid residue
of an .alpha.-tubulin." In one embodiment of this invention, prior art
beta-tubulin targeting agents are modified by making them water-soluble
and/or magnetic in accordance with the process of this invention.
Identification of the Tubulin Isotype Targets
[0032] The tubulin isotypes that are potential
chemotherapeutic targets are preferably those isotypes that are present
in a higher concentration in diseased biological organisms than in
normal biological organisms. They may be identified by, e.g., standard
analytical techniques.
[0033] By way of illustration, and not limitation,
an analysis may be done regarding the extent to which, if any, a
beta-tubulin isotype, e.g., is present in tumors. As is described in
the Yeh et al. paper cited elsewhere in this specification, one may
study a variety of tumors by "standard immunohistochemical techniques"
to determine the extent to which one or more tubulin isotypes if
present in the tumors. Yeh et al. state that: "Tumors were randomly
selected from the San Antonio Cancer Institute Tumor Bank to represent
a variety of tumor types, grades, and stages. Benign tissues adjacent
to the tumor were examined when possible. In addition to malignant
tumors, selected benign lesions, such as meningiomas, and tumors of low
malignant potential, such as giant cell tumors of bone, were also
examined. All tissues were formalin-fixed and paraffin-embedded . . . .
Standard immunohistochemical techniques were utilized [Hsu et al.,
1981]. The monoclonal antibody to the (BII isotype of tubulin (JDR.3B8)
was at an initial concentration of 2 mg/mL and diluted 1:2,000, for a
final concentration of 1 .mu.g/mL. No antigen retrieval step was used
because the antigen was easily accessible for immunohistochemical
staining. Slides were incubated at room temperature with the primary
antibody for 1 h. The sections were then exposed to a secondary
biotinylated rabbit anti-mouse antibody (DAKO, cat no. E354, 1:100),
then Streptavidin horseradish peroxidase was applied, followed by
diaminobenzidine and OsO.sub.4. Slides were counter-stained with methyl
green. A positive skin control and negative controls (minus antibody)
were run with each batch of tumors . . . . Slides were visualized using
an Olympus BX-40 microscope, equipped with PlanFluorite objectives. The
pattern and location of cells staining with the antibody to B11-tubulin
were recorded. Intensity and proportion of cells stained were recorded
in a semi-quantitative manner, as previously described [Allred et al.,
1998]. . . ."
Preparation of a Database of Tubulin Isotypes
[0034] In one embodiment of the process of this
invention, a database of tubulin isotypes is prepared. In this section
of the specification, excerpts from a paper that was prepared by one of
the applicants is presented. The paper in question is entitled
"Homology Modeling of Tubulin Isotypes and its Consequences for the
Biophysical Properties of Tubulin and Microtubules." One of the authors
of this paper is applicant Jack .A. Tuszynski; and such paper will
hereinafter be referred to as the "Tuszynski paper."
[0035] As is disclosed in the introductiory portion
of the Tuszynski et al. paper, "Microtubules, cylindrical organelles
found in all eukaryotes, are critically involved in a variety of
cellular processes including motility, transport and mitosis." As
authority for this proposition, the paper cites a text by J. S. Hymans
et al. entitled "Microtubules" (Wiley-Liss, New York, N.Y., 1994).
[0036] The Tuszynski paper also discloses that:
"Their component protein, tubulin, is composed of two polypeptides of
related sequence, designated .alpha. and .beta.. In addition to
.alpha.- and .beta.-tubulin, many microtubules in cells require the
related .gamma.-tubulin for nucleation." As authority for this
proposition, there are cited articles by H. P. Erickson
(".gamma.-tubulin nucleation, template or protofilament?," Nature Cell
Biology 2:E93-E96, 200) and by R. F. Luduena ("The multiple forms of
tubulin: different gene products and covalent modifications," Int. Rev.
Cytol. 178:207-275, 1998).
[0037] The Tuszynski paper also discloses that:
"Two other tubulins, designated .delta. and .epsilon., are widespread,
. . . although their roles are still uncertain . . . models utilizing
them have been proposed." As authority for this statement, the paper
cites works by S. T. Vaughan et al. ("New tubulins in protozoal
parasites," Curr. Biol. 10:R258-R259, 2000) and Y. F. Inclan et al.
("Structural models for the self-assembly and microtubule interactions
of . . . tubulin," Journal of Cell Science 114:413-422, 2001).
[0038] The Tuszynski paper also discloses that: "At
least three of these tubulins, namely, .alpha., .beta., and .gamma.,
exist in many organisms as families of closely related isotypes. An
enigmatic feature of tubulin is its heterogeneity. Not only can .alpha.
and .beta.-tubulin exist as multiple isotypes in many organisms, but
the protein can also undergo various post-translational modifications,
such as phosphorylation, acetylation, detyrosination, and
polyglutamylation." As authority for this statement, the paper cites a
work by A. Banergee, "Coordination of posttranslational modificatioins
of bovine brain, .alpha. tubulin, polyglycylation of delta2 tubulin,"
Journal of Biological Chemistry 277:46140-46144, 2002).
[0039] The Tuszynski paper also discloses that "At
the molecular level tubulin's roles are highly complex and are related
to the structural variations observed." As authority for this
proposition, the article cites a work by K. L. Richards et al.,
"Structure-function relationships in yeast tubulins," Molecular Biology
of the Cell 11:1887-1903, 2000.
[0040] The Tuszynski paper also states that " . . .
microtubules undergo cycles of rapid growth and disassembly in a
process known as dynamic instability that appears to be critical for
microtubule function, especially in mitosis. A guanosine triphosphate
(GTP) tubulin hydrolyzes bound GTP to GDP; the kinetics of this process
in beta-tubulin is critical in regulating dynamic instability by
affecting the loss of a so-called `cap` that stabilizes the microtubule
structure." As authority for this statement, the article cites a work
by T. J. Mitchison et al., "Dynamic instability of microtubule growth,"
Nature 312:237-242, 1984.
[0041] The Tuszynski paper also discloses that "In
addition to forming microtubules, tubulin interacts with a large number
of associated proteins. Some of these, such as tektin, may play
structural roles; others, the so-called microtubule-associated proteins
(MAPs) such as tau or MAP2, may stabilize the microtubules, stimulate
microtubule assembly and mediate interactions with other proteins.
Still others, such as kinesin and dynein, are motor proteins that move
cargoes, e.g., vesicles, along microtubules." As authority for these
statements, the article refers to works by M. Kikkawa et al.
("Switch-based mechanisms of kinesin motors," Nature 411:439-445, 2001)
and Z., Wang et al. ("The C-terminus of tubulin increases cytoplasmic
dynein and kinesin processity," Biophysical Journal 78:1955-1964,
2000).
[0042] As is also disclosed in the Tuszynski et al.
paper, "The precise molecular basis of the properties of tubulin is
still not well understood, in part because tubulin's highly flexible
conformation . . . makes it difficult to crystallize this region." As
authority for this statement, the article cites a work by O. Keskin et
al., "Relating molecular flexibility to function: a case study of
tubulin," Biphysical Journal 83:663-680, 2002.
[0043] The Tuszynski paper also discloses that: "In
a major advance in the field, the three-dimensional structure of bovine
brain tubulin has been determined by electron crystallography resulting
in atomic structures available in the The Protein Data Bank (Berman et
al. [2000] as entries 1TUB Nogales et al. (1998) and 1JFF Lowe et al.
(2000)." The Berman et al. reference is to an article by H. M. Berman
et al. on "The protein data bank," Nucleic Acids Research 28:235-242,
2000. The Nogales et al. reference was to an article by E. Nogales et
al. on the "Structure of the alpha/beta tubulin dimer by electron
crystallography," Nature 393: 199-203, 1998. The Lowe et al. reference
is to an article by J. Lowe et al. on the "Refined structure of
alpha/beta-tubulin at 3.5 angstrom resolution," Journal of Molecular
Biology 313:1045-1057 (2001).
[0044] The Tuszynski paper also discloses that
"Once the three dimensional structure of a protein is known it is
possible to use homology modeling to predict the structures of related
forms of the protein with some degree of accuracy. We have applied
these techniques to a series of 300 different tubulins, representing
.alpha.- and .beta.-tubulins from animals, plants, fungi and protists,
as well as several .gamma.-, .delta.- and .epsilon.-tubulins." It
should be noted that such "homology modeling" is frequently referred to
in the patent literature. Reference may be had, e.g., to U.S. Pat. Nos.
5,316,935; 5,486,802; 5,686,255; 5,738,998; 6,027,720; 6,080,549;
6,197,589; 6,356,845; 6,433,158; 6,451,986; 6,468,770; 6,548,477;
6,654,644; 6,654,667; 6.627,746; and the like. The entire disclosure of
each of these United States patents is hereby incorporated by reference
into this specification.
[0045] The Tuszynski paper also discloses that:
"For all of the resulting tubulin structures, we have been able to
estimate the magnitudes and orientations of their dipole moments,
charge distributions and surface to volume ratios. The magnitudes and
orientations of the tubulin dimers' dipose moments appear to play
significant roles in microtubule assembly and stability."
[0046] The Tuszynski paper also discloses that "In
addition, we have been able to generate plausible conformations for the
C-terminal regions. Notably, the C-termini of alpha- and beta-tubulin
were not resolved in the original crystallographic structures of
tubulin due to their flexibility and possibly sample inhomgeneity." As
support for this statement, the article cited a work by E. Nogales et
al., "Structure of the alpha/beta tubulin dimmer by electron
crystallography," Nature 393:199-203, 1998.
[0047] The Tuszynski paper also discloses that "The
importance of these regions is highlighted by the fact that they are
the site of most of tubulin's post-translational modifications, that
they bind to MAPs and that differences among tubulin isotypes cluster
here."
[0048] The Tuszynski paper discusses the materials
and methods used to construct the tublin isotype database. In one
embodiment of the process used in the Tuszynksi paper, the " . . .
abundance of various homologous isotypes of tubulin, called alpha and
beta (with additional indices labeling the isotypes) is correlated with
the specific locations of the cells in which they are found. We have
used the known amino-acid sequences in which the isotypes differ, in
connection with the data of the Downing group for the known
three-dimensional structure obtained by electron crystallography of
bovine brain tubulin by Nogales et al., and applied these in molecular
dynamics simulations in order to study the resulting differences in the
biophysical and biochemical properties such as: volume, surface are,
electric field distributions, binding sites, conformational changes,
etc. Our structural experiments on purified abII, abIII and abIV
tubulin dimers have produced strong evidence that their conformations
differ. Using the Molecular Simulation International (MSI) Homology
Software Module, we have constructed three-dimensional models of the
abI, abII, abIII, abIV, abV, abVI and abVII dimers. This Downing
structure was fitted to the amino acid sequences for porcine brain a-
and b-tubulin, which, for the beta subunit, is largely bII. To generate
models of the various dimers, the Homology software module is used to
align the sequences of the various isotypes to the sequence of the
Nogales et al structure, and the coordinates of the Nogales structure
are mapped to the aligned beta isotype. Then energy minimization and
molecular dynamic simulation is being used on the approximate result to
refine a structural model of each of these dimers. Similar homology
modeling approaches have been used to predict the structure of one
protein from that of a closely related protein; such models have also
been extensively used to design useful drugs. In constructing
computational 3D models from all of the available sequences of tubulin
isotypes we have exploited the high degree of sequence and structure
conservation that is observed within tubulin isotypes and between the
alpha and beta subunits by using software such as the experimental
Modeller and tubulin crystallographic data as structural templates to
produce 3D models containing chosen amino acid sequences."
[0049] In one embodiment of the Tuszynski process,
the "Swiss-Prot database" was referred to. As is also disclosed in the
Tuszynski paper, "As an initial step the Swiss-Prot database Release
40.2 of 8 Nov. 2002 . . . (available at http://www.expasy.org/sprot/])
was searched for tubulin amino acid sequences." The article referred to
a work by B. Boekmann et al. ("The SWISS-PROT protein knowledgebase and
its supplement TrEMBL," Nucl. Acids. Res. 31:365-370, 2003) for a
reference relating to such "Swiss-Prot database." It should be noted
that many United States patents refer to such Swiss-Prot database.
Reference may be had, e.g., to U.S. Pat. Nos. 6,183,968; 6,207,397;
6,303,319; 6,372,897; 6,373,971 (method and apparatus for pattern
discovery in protein sequences); U.S. Pat. Nos. 6,387,641; 6,631,322
(methods for using functional site descriptors and predicting protein
function), U.S. Pat. No. 6,466,874 (Rosetta stone method for detecting
protein function and protein-protein interactions from genome
sequences), U.S. Pat. No. 6,470,277 (techniques for facilitating
identification of candidate genes), U.S. Pat. No. 6,564,151 (assigning
protein functions by comparative genome analysis protein phylogenetic
profiles), and the like. The entire disclosure of each of these United
States patents is hereby incorporated by reference into this
specification.
[0050] Referring again to the Tuszynksi paper, it
is disclosed that: "A search using the keyword `tubulin` was manually
filtered to separate actual tubulin sequences from those of other
tubulin related proteins. This provided some 290 sequences,
representing a wide range of species. Of these 27 are annotated as
being fragmentary, leaving 263 complete tubulin monomier sequences. Of
particular interest were the 15 human sequences obtained . . . ."
[0051] Referring again to the Tuszynksi paper, it
is disclosed that: "Table 1 summarizes all of the tubulin sequences
used in this study for quick reference and convenience. The table names
the source organism, and for each . . . gives the name used in the
databank. It is important to relate the biochemical data encapsulated
by the amino acid sequence to the biologically relevant information
presented in Table 1 in the form of the organism from which a given
tubulin is derived."
[0052] In referring to such "Table 1," the
Tuszynski paper states that: "Table 1. Tubulin sequences used in this
study. The table names the source organism, and for each . . . gives
the name used in the databank." TABLE-US-00001 File Name Name of
Organism SEQ. NO. TBA1_ANEPH Anemia phyllitidis SEQ ID NO. 1 TBA1_ARATH
Arabidopsis thaliana SEQ ID NO. 2 TBA1_CHICK Gallus gallus SEQ ID NO. 3
TBA1_CHLRE Chlamydomonas reinhardtii SEQ ID NO. 4 TBA1_DROME Drosophila
melanogaster SEQ ID NO. 5 TBA1_ELEIN Eleusine indica SEQ ID NO. 6
TRA1_EMENI Emericella nidulans SEQ ID NO. 7 TBA1_ENTHI Entamoeba
histolytica SEQ ID NO. 8 TBA1_HOMAM Homarus americanus SEQ ID NO. 9
TBA1_HORVU Hordeum vulgare SEQ ID NO. 10 TBA1_HUMAN Homo sapiens SEQ ID
NO. 11 TBA1_MAIZE Zea mays SEQ ID NO. 12 TBA1_MOUSE Mus musculus SEQ ID
NO. 13 TBA1_NEUCR Neurospora crassa SEQ ID NO. 14 TBA1_ORYSA Oryza
sativa SEQ ID NO. 15 TBA1_PARLI Paracentrotus lividus SEQ ID NO. 16
TBA1_PEA Pisum sativus SEQ ID NO. 17 TBA1_PELFA Pelvetia fastigiata SEQ
ID NO. 18 TBA1_PNECA Pneumocystis carinii SEQ ID NO. 19 TBA1_SCHPO
Schizosaccharomyces pombe SEQ ID NO. 20 TBA1_STYLE Stylonichia lemnae
SEQ ID NO. 21 TBA1_VOLCA Volvox carteri SEQ ID NO. 22 TBA1_YEAST
Saccharomyces cerevisiae SEQ ID NO. 23 TBA2_ANEPH Anemia phyllitidis
SEQ ID NO. 24 TBA2_ARATH Arabidopsis thaliana SEQ ID NO. 25 TBA2_CAEEL
Caenorhabditis elegans SEQ ID NO. 26 TBA2_CHICK Gallus gallus SEQ ID
NO. 27 TBA2_CHLRE Chlamydomonas reinhardtii SEQ ID NO. 28 TBA2_DROME
Drosophila melanogaster SEQ ID NO. 29 TBA2_ELEIN Eleusine indica SEQ ID
NO. 30 TBA2_EMENI Emericella nidulans SEQ ID NO. 31 TBA2_HOMAM Homarus
americanus SEQ ID NO. 32 TBA2_HORVU Hordeum vulgare SEQ ID NO. 33
TBA2_HUMAN Homo sapiens SEQ ID NO. 34 TBA2_MAIZE Zea mays SEQ ID NO. 35
TBA2_MOUSE Mus musculus SEQ ID NO. 36 TBA2_NEUCR Neurospora crassa SEQ
ID NO. 37 TBA2PATVU Patella vulgata SEQ ID NO. 38 TBA2_PELFA Pelvetia
fastigiata SEQ ID NO. 39 TBA2_SCHPO Schizosaccharomyces pombe SEQ ID
NO. 40 TBA2_STYLE Stylonichia lemnae SEQ ID NO. 41 TBA3_ARATH
Arabidopsis thaliana SEQ ID NO. 42 TBA3_CHICK Gallus gallus SEQ ID NO.
43 TBA3_DROME Drosophila melanogaster SEQ ID NO. 44 TBA3_ELEIN Eleusine
indica SEQ ID NO. 45 TBA3_HOMAM Homarus americanus SEQ ID NO. 46
TBA3_HORVU Hordeum vulgare SEQ ID NO. 47 TBA3_MAIZE Zea mays SEQ ID NO.
48 TBA3_MOUSE Mus musculus SEQ ID NO. 49 TBA3_YEAST Saccharomyces
cerevisiae SEQ ID NO. 50 TBA4_CHICK Gallus gallus SEQ ID NO. 51
TBA4_DROME Drosophila melanogaster SEQ ID NO. 52 TBA4_HUMAN Homo
sapiens SEQ ID NO. 53 TBA4_MAIZE Zea mays SEQ ID NO. 54 TBA5_CHICK
Gallus gallus SEQ ID NO. 55 TBA5_MAIZE Zea mays SEQ ID NO. 56
TBA6_ARATH Arabidopsis thaliana SEQ ID NO. 57 TBA6_HUMAN Homo sapiens
SEQ ID NO. 58 TBA6_MAIZE Zea mays SEQ ID NO. 59 TBA6_MOUSE Mus musculus
SEQ ID NO. 60 TBA8_CAEEL Caenorhabditis elegans SEQ ID NO. 61
TBA8_CHICK Gallus gallus SEQ ID NO. 62 TBA8_HUMAN Homo sapiens SEQ ID
NO. 63 TBA8_MOUSE Mus musculus SEQ ID NO. 64 TBA_AJECA Ajellomyces
capsulatum SEQ ID NO. 65 TBAA_PNECA Pneumocystis carinii SEQ ID NO. 66
TBAA_SCHCO Schizophyllum commune SEQ ID NO. 67 TBA_AVESA Avena sativa
SEQ ID NO. 68 TBA_BLEJA Blepharisma japonicus SEQ ID NO. 69 TBA_BOMMO
Bombyx mori SEQ ID NO. 70 TBAB_SCHCO Schizophyllum commune SEQ ID NO.
71 TBA_CANAL Candida albicans SEQ ID NO. 72 TBA_CHLVU Chlorella
vulgaris SEQ ID NO. 73 TBA_DICDI Dictyostelium discoideum SEQ ID NO. 74
TBAD_PHYPO Physarum polycephalum SEQ ID NO. 75 TBAE_PHYPO Physarum
polycephalum SEQ ID NO. 76 TBA_EUGGR Euglena gracilis SEQ ID NO. 77
TBA_EUPOC Euplotes octocarinatus SEQ ID NO. 78 TBA_EUPVA Euplotes
vannus SEQ ID NO. 79 TBA_HAECO Haemonchus contortus SEQ ID NO. 80
TBA_LEPSE Leptomonas seymouri SEQ ID NO. 81 TBA_LYTPI Lytechinus pictus
SEQ ID NO. 82 TBA_MYCGR Mycosphaerella graminicola SEQ ID NO. 83
TBA_NAEGR Naegleria gruberi SEQ ID NO. 84 TBA_NOTVI Notophtalamus
viridescens SEQ ID NO. 85 TBAN_PHYPO Physarum polycephalum SEQ ID NO.
86 TBA_OCTDO Octopus Dofleini SEQ ID NO. 87 TBA_OCTVU Lytechinus pictus
SEQ ID NO. 88 TBA_ONCKE Onchorhynchus keta SEQ ID NO. 89 TBA_OXYGR
Oxytricha granulifera SEQ ID NO. 90 TBA_PICAB Picia abies SEQ ID NO. 91
TBA_PIG Sus scrofa SEQ ID NO. 92 TBA_PLAFK Plasmodium falciparum SEQ ID
NO. 93 TBA_PLAYO Plasmodium berghei yoelii SEQ ID NO. 94 TBA_PRUDU
Prunus dulcis SEQ ID NO. 95 TBA_SORMA Sordaria macrospora SEQ ID NO. 96
TBA_TETPY Tetrahymena pyriformis SEQ ID NO. 97 TBA_TETTH Tetrahymena
thermophila SEQ ID NO. 98 TBAT_ONCMY Onchorhynchus mykiss SEQ ID NO. 99
TBA_TORMA Torpedo marmorata SEQ ID NO. 100 TBA_TOXGO Taxoplasma gondii
SEQ ID NO. 101 TBA_TRYBR Trypanosoma brucei SEQ ID NO. 102 TBA_TRYCR
Trypanosoma cruzi SEQ ID NO. 103 TBA_WHEAT Triticum aestivum SEQ ID NO.
104 TBA_XENLA Xenopus laevis SEQ ID NO. 105 TBB1_ANEPH Anemia
phyllitidis SEQ ID NO. 106 TBB1_ARATH Arabidopsis thaliana SEQ ID NO.
107 TBB1_AVESA Avena sativa SEQ ID NO. 108 TBB1_BRUPA Brugia pahangi
SEQ ID NO. 109 TBB1_CHICK Gallus gallus SEQ ID NO. 110 TBB1_CHOCR
Chondrus crispus SEQ ID NO. 111 TBB1_COLGL Glomerella cingulata SEQ ID
NO. 112 TBB1_COLGR Glomerella graminicola SEQ ID NO. 113 TBB1_CYAPA
Cyanaphora paradoxa SEQ ID NO. 114 TBB1_DAUCA Daucus carota SEQ ID NO.
115 TBB1_ELEIN Eleusine indica SEQ ID NO. 116 TBB1_EMENI Emericella
nidulans SEQ ID NO. 117 TBB1_GADMO Gadus morhua SEQ ID NO. 118
TBB1_GEOCN Galactomyces geotrichum SEQ ID NO. 119 TBB1_HOMAM Homarus
americanus SEQ ID NO. 120 TBB1_HUMAN Homo sapiens SEQ ID NO. 121
TBB1_LUPAL Lupinus albus SEQ ID NO. 122 TBB1_MAIZE Zea mays SEQ ID NO.
123 TBB1_MANSE Manduca sexta SEQ ID NO. 124 TBB1_NOTCO Notothenia
coriiceps SEQ ID NO. 125 TBB1_ORYSA Oryza sativa SEQ ID NO. 126
TBB1_PARTE Paramecium tetraurelia SEQ ID NO. 127 TBB1_PEA Pisum sativus
SEQ ID NO. 128 TBB1_PHYPO Physarum polycephalum SEQ ID NO. 129
TBB1_PORPU Porphyra purpura SEQ ID NO. 130 TBB1_RAT Rattus norvegicus
SEQ ID NO. 131 TBB1_SOLTU Solanum tuberosum SEQ ID NO. 132 TBB1_SOYBN
Glycine max SEQ ID NO. 133 TBB1_TRIVI Trichoderma viride SEQ ID NO. 134
TBB1_VOLCA Volvox carteri SEQ ID NO. 135 TBB1_WHEAT Triticum aestivum
SEQ ID NO. 136 TBB2_ANEPH Anemia phyllitidis SEQ ID NO. 137 TBB2_ARATH
Arabidopsis thaliana SEQ ID NO. 138 TBB2_CAEEL Caenorhabditis elegans
SEQ ID NO. 139 TBB2_CHICK Gallus gallus SEQ ID NO. 140 TBB2_COLGL
Glomerella cingulata SEQ ID NO. 141 TBB2_COLGR Glomerella graminicola
SEQ ID NO. 142 TBB2DAUCA Daucus carota SEQ ID NO. 143 TBB2_DROER
Drosophila erecta SEQ ID NO. 144 TBB2_DROME Drosophila melanogaster SEQ
ID NO. 145 TBB2_ELEIN Eleusine indica SEQ ID NO. 146 TBB2_EMENI
Emericella nidulans SEQ ID NO. 147 TBB2_ERYPI Erysiphe pisi SEQ ID NO.
148 TBB2_GEOCN Galactomyces geotrichum SEQ ID NO. 149 TBB2_HOMAM
Homarus americanus SEQ ID NO. 150 TBB2_HUMAN Homo sapiens SEQ ID NO.
151 TBB2_LUPAL Solanum tuberosum SEQ ID NO. 152 TBB2_MAIZE Zea mays SEQ
ID NO. 153 TBB2_ORYSA Oryza sativa SEQ ID NO. 154 TBB2_PEA Pisum
sativus SEQ ID NO. 155 TBB2_PHYPO Physarum polycephalum SEQ ID NO. 156
TBB2_PORPU Porphyra purpura SEQ ID NO. 157 TBB2_SOLTU Solanum tuberosum
SEQ ID NO. 158 TBB2_SOYBN Glycine max SEQ ID NO. 159 TBB2_TRIVI
Trichoderma viride SEQ ID NO. 160 TBB2_WHEAT Triticum aestivum SEQ ID
NO. 161 TBB2_XENLA Xenopus laevis SEQ ID NO. 162 TBB3_ANEPH Anemia
phyllitidis SEQ ID NO. 163 TBB3_CHICK Gallus gallus SEQ ID NO. 164
TBB3_DROME Drosophila melanogaster SEQ ID NO. 165 TBB3_ELEIN Eleusine
indica SEQ ID NO. 166 TBB3_MAIZE Zea mays SEQ ID NO. 167 TBB3_ORYSA
Oyza sativa SEQ ID NO. 168 TBB3_PEA Pisum sativus SEQ ID NO. 169
TBB3_PORPU Porphyra purpura SEQ ID NO. 170 TBB3_SOYBN Glycine max SEQ
ID NO. 171 TBB3_WHEAT Triticum aestivum SEQ ID NO. 172 TBB4_ARATH
Arabidopsis thaliana SEQ ID NO. 173 TBB4_CAEEL Caenorhabditis elegans
SEQ ID NO. 174 TBB4_CHICK Gallus gallus SEQ ID NO. 175 TBB4_ELEIN
Eleusine indica SEQ ID NO. 176 TBB4_HUMAN Homo sapiens SEQ ID NO. 177
TBB4_MAIZE Zea mays SEQ ID NO. 178 TBB4_PORPU Porphyra purpura SEQ ID
NO. 179 TBB4_WHEAT Triticum aestivum SEQ ID NO. 180 TBB4_XENLA Xenopus
laevis SEQ ID NO. 181 TBB5_ARATH Arabidopsis thaliana SEQ ID NO. 182
TBB5_CHICK Gallus gallus SEQ ID NO. 183 TBB5_ECTVR Ectocarpus
variabilis SEQ ID NO. 184 TBB5_HUMAN Homo sapiens SEQ ID NO. 185
TBB5_MAIZE Zea mays SEQ ID NO. 186 TBB5_WHEAT Triticum aestivum SEQ ID
NO. 187 TBB6_ARATH Arabidopsis thaliana SEQ ID NO. 188 TBB6_CHICK
Gallus gallus SEQ ID NO. 189 TBB6_ECTVR Ectocarpus variabilis SEQ ID
NO. 190 TBB6_MAIZE Zea mays SEQ ID NO. 191 TBB7_ARATH Arabidopsis
thaliana SEQ ID NO. 192 TBB7_CAEBR Caenorhabditis briggsae SEQ ID NO.
193 TBB7_CAEEL Caenorhabditis elegans SEQ ID NO. 194 TBB7_CHICK Gallus
gallus SEQ ID NO. 195 TBB7_MAIZE Zea mays SEQ ID NO. 196 TBB8_ARATH
Arabidopsis thaliana SEQ ID NO. 197 TBB8_MAIZE Zea mays SEQ ID NO. 198
TBB9_ARATH Arabidopsis thaliana SEQ ID NO. 199 TBB_ACHKL Achlya
klebsiana SEQ ID NO. 200 TBB_ACRCO Neotyphodium coenophialum SEQ ID NO.
201 TBB_AJECA Ajellomyces capsulatum SEQ ID NO. 202 TBB_ASPFL
Aspergillus flavus SEQ ID NO. 203 TBB_ASPPA Aspergillus parasiticus SEQ
ID NO. 204 TBB_BABBO Babesia bovis SEQ ID NO. 205 TBB_BOMMO Bombyx mori
SEQ ID NO. 206 TBB_BOTCI Botryotinia fuckeliana SEQ ID NO. 207
TBB_CANAL Candida albicans SEQ ID NO. 208 TBB_CEPAC Acremonium
chrysogenum SEQ ID NO. 209 TBB_CHLIN Chlamydomonas incerta SEQ ID NO.
210 reinhardtii TBB_CHLRE Chlamydomonas reinhardtii SEQ ID NO. 211
TBB_CICAR Cicer arietinum SEQ ID NO. 212 TBB_DICDI Dictyostelium
discoideum SEQ ID NO. 213 TBB_EIMTE Eimeria tenella SEQ ID NO. 214
TBB_EPITY Epichloe typhina SEQ ID NO. 215 TBB_ERYGR Blumeria graminis
SEQ ID NO. 216 TBB_EUGGR Euglena gracilis SEQ ID NO. 217 TBB_EUPCR
Monoeuplotes crassus SEQ ID NO. 218 TBB_EUPFO Euplotes focardii SEQ ID
NO. 219 TBB_EUPOC Euplotes octocarinatus SEQ ID NO. 220 TBB_GIALA
Giardia intestinalis SEQ ID NO. 221 TBB_GIBFU Gibberella fujikuroi SEQ
ID NO. 222 TBB_HALDI Haliotis discus SEQ ID NO. 223 TBB_HORVU Hordeum
vulgare SEQ ID NO. 224 TBB_LEIME Leishmania mexicana SEQ ID NO. 225
TBB_LYMST Lymnae stagnalis SEQ ID NO. 226 TBB_LYTPI Lytechinus pictus
SEQ ID NO. 227 TBB_MYCPJ Mycosphaerella pini SEQ ID NO. 228 TBB_NAEGR
Naegleria gruberi SEQ ID NO. 229 TBB_NEUCR Neurospora crassa SEQ ID NO.
230 TBB_OCTDO Octopus Dofleini SEQ ID NO. 231 TBB_ONCGI Onchocerca
gibsoni SEQ ID NO. 232 TBB_PARLI Paracentrotus lividus SEQ ID NO. 233
TBB_PENDI Penicillium digitatum SEQ ID NO. 234 TBB_PESMI Pestalotiopsis
microspora SEQ ID NO. 235 TBB_PHANO Phaeosphaeria nodorum SEQ ID NO.
236 TBB_PHYCI Phytophthora cinnamomi SEQ ID NO. 237 TBB_PIG Sus scrofa
SEQ ID NO. 238 TBB_PLAFA Plasmodium falciparum SEQ ID NO. 239 TBB_PLAFK
Plasmodium falciparum SEQ ID NO. 240 TBB_PLESA Pleurotus sajor-caju SEQ
ID NO. 241 TBB_PNECA Pneumocystis carinii SEQ ID NO. 242
TBB_POLAG Polytomella agilis SEQ ID NO. 243
TBB_PSEAM Pseudopleuronectes americanus SEQ ID NO. 244 TBBQ_HUMAN Homo
sapiens SEQ ID NO. 245 TBB_RHYSE Rhynchosporium secalis SEQ ID NO. 246
TBB_SCHCO Schizophyllum commune SEQ ID NO. 247 TBB_SCHPO
Schizosaccharomyces pombe SEQ ID NO. 248 TBB_STRPU Strongylocentrotus
purpuratus SEQ ID NO. 249 TBB_STYLE Stylonichia lemnae SEQ ID NO. 250
TBB_TETPY Tetrahymena pyriformis SEQ ID NO. 251 TBB_TETTH Tetrahymena
thermophila SEQ ID NO. 252 TBB_THAWE Thalassiosira weisflogii SEQ ID
NO. 253 TBB_TOXGO Taxoplasma gondii SEQ ID NO. 254 TBB_TRYBR
Trypanosoma brucei SEQ ID NO. 255 TBB_TRYCR Trypanosoma cruzi SEQ ID
NO. 256 TBB_VENIN Venturia inaequalis SEQ ID NO. 257 TBBX_HUMAN Homo
sapiens SEQ ID NO. 258 TBB_YEAST Saccharomyces cerevisiae SEQ ID NO.
259 TBD_HUMAN Homo sapiens SEQ ID NO. 260 TBE_HUMAN Homo sapiens SEQ ID
NO. 261 TBG1_HUMAN Homo sapiens SEQ ID NO. 262 TBG1_MAIZE Zea mays SEQ
ID NO. 263 TBG1_MOUSE Mus musculus SEQ ID NO. 264 TBG2_ARATH
Arabidopsis thaliana SEQ ID NO. 265 TBG2_DROME Drosophila melanogaster
SEQ ID NO. 266 TBG2_EUPCR Monoeuplotes crassus SEQ ID NO. 267
TBG2_EUPOC Euplotes octocarinatus SEQ ID NO. 268 TBG2_HUMAN Homo
sapiens SEQ ID NO. 269 TBG2_MAIZE Zea mays SEQ ID NO. 270 TBG2_MOUSE
Mus musculus SEQ ID NO. 271 TBG2_ORYSA Oryza sativa SEQ ID NO. 272
TBG3_MAIZE Zea mays SEQ ID NO. 273 TBG_ANEPH Anemia phyllitidis SEQ ID
NO. 274 TBG_CAEEL Caenorhabditis elegans SEQ ID NO. 275 TBG_CANAL
Candida albicans SEQ ID NO. 276 TBG_CHLRE Chlamydomonas reinhardtii SEQ
ID NO. 277 TBG_COCHE Cochiloboius heterostrophus SEQ ID NO. 278
TBG_EMENI Emericella nidulans SEQ ID NO. 279 TBG_ENTHI Entamoeba
histolytica SEQ ID NO. 280 TBG_EUPAE Euplotes aediculatus SEQ ID NO.
281 TBG_NEUCR Neurospora crassa SEQ ID NO. 282 TBG_PHYPA Physcomitrella
patens SEQ ID NO. 283 TBG_PLAFO Plasmodium falciparum SEQ ID NO. 284
TBG_RETFI Reticulomyxa filosa SEQ ID NO. 285 TBG_SCHJP
Schizosaccharomyces japonicus SEQ ID NO. 286 TBG_SCHPO
Schizosaccharomyces pombe SEQ ID NO. 287 TBG_USTVI Microbotryum
violaceum SEQ ID NO. 288 TBG_XENLA Xenopus laevis SEQ ID NO. 289
TBG_YEAST Saccharomyces cerevisiae SEQ ID NO. 290
[0053] Referring again to the Tuszynksi paper, and
in referring to "Model Construction." the paper disclosed that: "The
structures of alpha and beta tubulins are known to be quite similar,
being nearly indistinguishable at 6 Angstroms . . . dispite only a 40%
amino acid homology." As support for this statement, reference is made
to an article by H. Li et al., "Microtubule structure at 8 angstrom
resolution," Structure 10:1317-1328, 2002."
[0054] Referring again to the Tuszynksi paper, it
is disclosed that: " . . . Since the sequences within an alpha or beta
tubulin family are more similar to each other than to those sequences
belonging to the other families of tubuins, it is reasonable to believe
that any given sequence should produce a structure very similar to
another member of a given family. Further support for this comes from
the published structures of Nogales et al. (1998) and Lowe et al.
(2001) which are of a porcine sequence, but which were fit to data from
an inhomogeneous bovine sample." The Nogales et al. reference is to an
article by E. Nogales et al., "Structure of the alpha/beta tubulin
dimmer by electron crystallogaraphy," Nature 393: 199-303. The Lowe et
al. reference was to an article by J. Lowe et al., "Refined structure
of alpha/betal tubulin at 3.5 angstrom resolution," Journal of
Molecular Biology 313:1045-1057 (2001).
[0055] Referring again to the Tuszynksi paper, it
is disclosed that: "Accordingly, by substituting appropriate amino acid
side chains and properly adjusting other residues to accommodate
insertions and deletions and in the sequence, crystallographic
structures can be used as a framework to produce model structures with
different sequences with a high degree of confidence."
[0056] As is also disclosed in the Tuszynski et al.
paper, "To build such 3D structures of the many isotypes Modeller
(version 6.2) was used [Marti-Renom 2000]." The Marti-Renom reference
is an article by M. A. Marti-Renom et al., "Comparative protein
structure modeling of genes and genomes," Annu. Rev. Biophys. Biomol.
Struct. 29:291-325, 2000.
[0057] In the Marti-Renom paper, it is stated that
the MODELLER database is disclosed at
"guitar.Rockefeller.edu/modeler.html" and is discussed in an article by
A. Sali et al., "Comparative protein modeling by satisfaction of
spatial restraints," J. Mol. Biol. 234:799-915, 1993.
[0058] The Modeller database is also referred to in
the patent literature. Reference may be had, e.g., to U.S. Pat. Nos.
5,859,972; 5,968,782; 5,985,643; 6,225,446; 6,251,620 (three
dimensional structure of a ZAP tyrosine protein kinase fragement and
modeling methods), U.S. Pat. Nos. 6,391,614; 6,417,324; 6,459,996;
6,468,772; 6,495,354; 6,495,674; 6,532,437; 6,559,297; 6,605,449;
6,642,041; 6,607,902; 6,645,762; 6,569,656; 6,677,377 (structure based
discovery of inhibitors of matriptase for the treatement of cancer and
other conditions), U.S. Pat. No. 6,680,176; and the like. The entire
disclosure of each of these United States patents is hereby
incorporated by reference into this specification.
[0059] The Modeller database may be used for the
"comparative protein structure modeling" that is discussed in, e.g.,
the Marti-Renom paper (and also in the Tuszynski paper). Such
"comparative protein structure modeling" is also referred to in the
patent literature. Reference may be had, e.g., to U.S. Pat. Nos.
6,462,189; 6,703,199; and 6,703,901; reference may also be had to
published United States patent applications 2002/0045578 and
2004/0014944 (method and system useful for structural classification of
unknown polypeptides); and reference also may be had to international
patent publications WO0135255 (large scale comparative protein
structure modeling); WO0234877; WO03019183(process for the informative
and iterative design of a gene-family screening library), and
WO03029404. The entire disclosure of each of these United States
patents, of each of these published United States patent applications,
and of each of these international patent applications, is hereby
incorporated in its entirety into this specification.
[0060] Referring again to the Tuszynksi paper, and
to the Modeller program used therein, it is disclosed that: "To build
the library of 3D tubulin structures, Modeller (version 6v2) was used .
. . . This program uses alignment of the sequences with known related
structures, used as templates, to obtain spatial constraints that the
output structure must satisfy. Additional restraints derived from
statistical studies of representative protein and chemical structures
are also used to ensure a physically probable result. Missing loop
regions are predicuted by simulated annealing optimization of a
molecular mechanics model."
[0061] As is known to those skilled in the art, a
system as large as tubulin may have many local energy minima; thus, an
energy minimization program may not be sufficient to find the lowest
global minimum. To seek the difference in conformation between GTP
(guanosine triphosphate) and GDP (guanosine diphosphate) tubulin,
applicants preferably use an annealing procedure in which the molecule
is heated up well beyond physiological temperatures to induce a
difference in conformation and is then slowly cooled down below
physiological temperatures. The cooling process is maintained at a low
enough rate so that the molecule can move between minima and find a
lower energy final conformation. For a similar process that is applied
by kinesin, reference may be had, e.g., to an article by W. Wriggers et
al. on "Nucleotide-dependent movements of the kinesis motor domain
predicted by simulated annealing," Biophys. J., 75:646-661, August,
1998.
[0062] In one embodiment of the process of this
invention, the TINKER molecular simulation software is used. This
software package is described, e.g., in an article by M. J. Dudek et
al. on the "Accurate modeling of the intramolecular electrostatic
energy of proteins," J. Comput. Chem, 16:791-816, 1995. This TINKER
software is also described in, e.g., U.S. Pat. Nos. 5,049,390;
6,180,612; 6,531,306; 6,537,791; and 6,573,060. The entire disclosure
of each of these United States patents is hereby incorporated by
reference into this specification.
[0063] In one embodiment, the TINKER anneal program
is preferably used to heat up the proteins from 1 degree Kelvin to 400
degrees Kelvin and then cool them very slowly to 200 degrees Kelvin.
[0064] In one embodiment, the anneal program is
used to heat up the proteins from a temperature of from about 1 to
about 299 degrees Kelvin to a temperature within the range of from
about 300 to about 500 degrees Kelvin linearly over a period of from
about 100 to about 100,000 picoseconds, preferably, overa period of at
least about 200 picoseconds.
[0065] Referring again to the Tuszynksi paper, it
is disclosed therein that "Since the 3D structures of tubulin lack the
extreme C-termini of the proteins, we used this capability to create
structure files that include the C-terminal amino acids by including
those portions of the sequence in the Modeller input." In the process
of this invention, the tubulin with its C-terminii, "tubulin-C," may be
generated by adding the missing residues onto the alpha band
beta-tubulin. Thus, e.g., one may use the "MOLMOL" software to add the
"missing residues." See, e.g., an article by R. Koradi, "MOLMOL: a
program for display and analysis of macromolecular structures," J. Mol.
Graphics, 14:51-55, 1996. Reference also may be had, e.g., to U.S. Pat.
No. 6,077,682 (method of identifying inhibitors of sensor histidine
kinases through rational drug design); U.S. Pat. Nos. 6,162,627;
6,171,804 (method of determining interdomain orientation and changes of
interdomain orientation on ligaton), U.S. Pat. No. 6,723,697; and the
like. The entire disclosure of each of these United States patents is
hereby incorporated by reference into this specification.
[0066] In the process described in the Tuszynski
paper, the missing residues were added by the Modeller software, and
the "tubulin-C model" was then subjected to an energy minimization
program. As is known to those skilled in the art, in an energy
minimization program, one searches for the minimum energy configuration
of a molecule by moving down a gradient through configuration space
(see W. F. van Gusteren et al., "Computer simulation of molecular
dynamics: Methodoly, applications and perspectives in chemistry,"
Angew. Chem. Int. Ed. Engl., 29-992-1023, 1990. Reference also may be
had, e.g., to U.S. Pat. No. 5,453,937 (method and system for protein
modeling); U.S. Pat. No. 5,557,535 (method and system for protein
modeling); U.S. Pat. No. 5,884,230 (method and system for protein
modeling); U.S. Pat. No. 6,188,965 (apparatus and method for automated
protein design); U.S. Pat. No. 6,269,312 (apparatus ad method for
automated protein design); U.S. Pat. Nos. 6,376,504; 6,380,190;
6,403,312 (protein design authoamtic for protein libraries); U.S. Pat.
Nos. 6,514,729; 6,545,152; 6,682,923; 6,689,793; 6,708,120 (apparatus
and method for automated protein design); U.S. Pat. Nos. 6,746,853;
6,750,325; and the like. The entire disclosure of each of these United
States patents is hereby incorporated by reference into this
specification.
[0067] Referring again to the Tuszynski paper, it
is disclosed that: "For our work we used five structures from the
tubulin family as templates. One of these from PDB file 1FSZ (Lowe and
Amos, 1998) is the crystal structure of FtsZ, a putative prokaryontic
homolog of tublin Erickson (1997)." The Lowe and Amos reference is an
article by J. Lowe et al., "Crystal Structure of the bacterial
cell-division protein FtsZ," Nature, 393:203-206, 1998. The Erickson
reference is an article by H. P. Erickson, "FtsZ, a tubulin homologue,
in prokaryote cell division," Trends Cell Biol., 7:362-367, 1997.
Reference also may be had, e.g., to U.S. Pat. No. 6,350,866, the entire
disclosure of which is hereby incorporated by reference in to this
specification.
[0068] Another two of the tubulin templates
described in the Tuszynski paper were described as being "Two more
structures (and alpha- and a beta-monomer) came from 1TUB (Nogales et
al., 1998), the original tubulin crystal . . . ." The Nogales et al.
reference is E. S. Nogales et al., "Structure of the alpha/beta
tubulion dimmer by electron crystallography," Nature 393:199-203, 1998.
[0069] Yet another two of the tubulin templates
described in the Tuszynski paper were " . . . two more from 1JFF (Lowe
et al. 2001), a more refined version of the same structure." The Lowe
et al. reference is an article by J. H. Lowe et al. on "Refined
structure of alpha/beta tubulin at 3.5 angstrom resolution," Journal of
Molecular Biology, 313:1045-1057, 2001.
[0070] As is also disclosed in the Tuszynski et al.
paper, "With the resulting library of structural tubulin models,
various computational estimates of physical properties of the different
tubulins may be made. These include the volume, surface area, net
charge, and dipole moments. We performed these calculations on the
model structures, typically using analysis tools within the Gromacs
(Lindahl et al., 2001) molecular dynamics package (version 3.1.4) . . .
." The Lindahl et al. reference was an article by E. B. Lindahl et al.
entitled "GROMACS 3.0: A package for molecular simulation and
trajectory analysis," J. Mol. Mod., 7:306-317, 2001. Reference also may
be had, e.g., to published United States patent applications
2003/0082521, 2003/0108957, 2003/0187626 (method for providing thermal
excitation to molecular dynamics models), and 2003/0229456 (methods for
pedicting properties of molecules). The entire disclosure of each of
these published patent applications is hereby incorporated by reference
into this specification.
[0071] As is also disclosed in the Tuszynski
article, "We also analyzed the properties of the C-terminal projection.
We first needed to define this region. We used Clustal W (version 1.82)
(Thompson et al., 1994) in order to obtain a multiple sequence
alignment amongst the peptides. The multiple alignment then allows
rapid identification of corresponding residues in all of the
sequences." The Thompson et al. reference is an article by J. D.
Thompson et al. on "CLUSTAL W: Improving the sensitivity of progressive
multiple sequence alignment through sequence weighting,
positions-specific gap penalties and weight matrix choice," Nucleic
Acids Research, 22:4673-4680, 1994. Reference also may be had, e.g., to
U.S. Pat. Nos. 6,403,558; 6,451,548; 6,465,431; 6,489,537; 6,559,294;
6,582,950; 6,632,621; 6,653,283; 6,586,401; 6,589,936; 6,734,283; and
the like. The entire disclosure of each of these United States patents
is hereby incorporated by reference into this specification.
[0072] As is also disclosed in the Tuszynski paper,
"Other interesting properties of tubulin are inherent to dimers. In
order to create a set of dimers for study we fit an alpha-monomer and a
beta-monomer to their corresponding monomers in the 1JFF structure.
This was done by rotation and translation of the Modeller structures in
order to minimize the RMSD between a set of alpha-carbons from residues
present in all the sequences. This procedure does notprevent steric
conflicts between the two monomers and can create dimers with overlaps.
However, for some types of calculations such as estimates of multipiole
components, this will not prevent reasonable results. A set of over 200
dimers was obtained in this way by constructing all the alpha--beta
pairs that share a common species identifier in the Swiss-Prot name.
This restricts the number of dimers to a manageable set and voids
hybrids such as a carrot/chicken crossing that would not occur
naturally."
[0073] As is also disclosed in the Tuszynski paper,
"The library of tubulin structures . . . were analyzed by molecular
mechanics to determine their net charges, dipole moment components,
dipole orientations, volumes, surface areas and the lengths and charges
of their C-termini. The results of our computatations in this regard
are shown in Table 2." The Table 1 below contains the data presented in
the Table 2 of the article. TABLE-US-00002 TABLE 1 TABLE 1 Net Volume
Name <M_x> <M_y> <M_z>
<IMI> Chg A{circumflex over ( )}3 Area A{circumflex over
( )}2 TBA1_ANEPH -3.02E+02 -6.06E+02 1.16E+03 1.34E+03 -22 43722.51
46119.66 TBA1_ARATH 5.03E+01 -4.69E+02 1.50E+03 1.57E+03 -24 43725.6
46097.33 TBA1_CHICK -2.84E+02 -9.75E+02 1.61E+003 1.90E+03 -21 40489.52
43082.05 F TBA1_CHLRE -6.10E+01 -7.44E+02 7.28E+02 1.04E+03 -21
43642.98 45933.57 TBA1_DROME 5.95E+01 -6.29E+02 1.05E+03 1.23E+03 -22
44030.65 46824.19 TBA1_ELEIN -5.54E+01 -3.29E+02 1.37E+03 1.41E+003 -24
43860.52 46749.02 TBA1_EMENI -1.86E+02 -1.23E+03 7.71E+002 1.47E+03 -24
44069.69 46434.2 TBA1_ENTHI 2.50E+02 -6.70E+02 1.46E+02 7.30E+02 -10
44061.3 46460.88 TBA1_HOMAM -1.53E+02 -1.15E+03 9.52E+02 1.50E+03 -22
44167.33 46824.48 TBA1_HORVU 1.55E+02 -3.40E+02 1.27E+03 1.32E+03 -23
43590.96 45826.84 TBA1_HUMAN -4.67E+02 -8.10E+02 1.11E+03 1.45E+03 -24
44250.31 47173.96 TBA1_MAIZE 1.03E+02 -3.28E+02 1.28E+03 1.32E+03 -24
43834.72 46651.62 TBA1_MOUSE -3.33E+02 -1.21E+03 7.70E+02 1.47E+03 -24
44263.22 47101.9 TBA1_NEUCR 4.87E+01 -6.76E+02 6.94E+02 9.70E+02 -19
44052.23 46358.29 TBA1_ORYSA -2.19E+02 -1.16E+03 1.12E+03 1.62E+03 -24
43648.39 45939.87 TBA1_PARLI 2.71E+002 -1.19E+03 1.78E+03 2.16E+03 -25
44183.57 46803.97 TBA1_PEA -3.23E+02 -7.69E+02 1.05E+03 1.34E+03 -23
43567.64 45723.58 TBA1_PELFA -4.01E+002 -1.41E+003 8.27E+002 1.68E+003
-24 43906.79 46567.68 TBA1_PNECA -2.57E+001 -9.24E+002 9.87E+002
1.35E+003 -20 44334.85 47012.18 TBA1_SCHPO -2.56E+000 -1.26E+003
6.43E+002 1.41E+003 -22 44895.34 47968.48 TBA1_STYLE -2.03E+002
-1.27E+003 8.29E+002 1.53E+003 -23 43243.03 45451.26 TBA1_VOLCA
-1.26E+002 -8.00E+002 6.88E+002 1.06E+003 -21 43630.21 45981.34
TBA1_YEAST -1.90E+002 -9.79E+002 4.23E+002 1.08E+003 -22 43873.76
46461.59 TBA2_ANEPH -2.78E+002 -8.85E+002 1.35E+003 1.64E+003 -15
35461.49 37487.42 F TBA2_ARATH -1.18E+002 -6.40E+002 1.50E+003
1.63E+003 -23 43766.11 46803.45 TBA2_CAEEL -1.39E+002 -8.51E+002
1.07E+003 1.37E+003 -22 43890.89 46319.2 TBA2_CHICK -9.83E+001
-2.00E+002 1.12E+003 1.14E+003 -25 43774.22 46365.41 TBA2_CHLRE
-1.41E+002 -8.09E+002 7.99E+002 1.15E+003 -22 43601.27 45660.58
TBA2_DROME -9.25E+001 -1.09E+003 7.03E+002 1.30E+003 -21 44116.52
46892.4 TBA2_ELEIN 3.81E+001 -3.80E+002 1.39E+003 1.44E+003 -21
43843.11 45940.56 TBA2_EM EN I -3.11E+002 -1.41E+003 6.14E+002
1.57E+003 -21 44173.08 46890.29 TBA2_HOMAM -7.38E+002 -6.68E+002
9.66E+002 1.39E+003 -20 44252.35 47078.27 TBA2_HORVU -1.24E+002
-5.45E+002 1.44E+003 1.54E+003 -24 43705.55 46254.23 TBA2_HUMAN
-7.89E+001 -1.27E+003 7.92E+002 1.49E+003 -23 44045.61 46631.11
TBA2_MAIZE 3.87E+001 -3.08E+002 1.32E+003 1.35E+003 -24 43670.06
46059.53 TBA2_MOUSE -4.62E+002 -1.26E+003 7.32E+002 1.53E+003 -24
44188.6 46902.07 TBA2_NEUCR -4.64E+002 -8.59E+002 6.78E+002 1.19E+003
-22 43969.77 46397.94 TBA2PATVU -7.08E+002 -1.23E+003 9.86E+002
1.73E+003 -24 44205.67 46802.41 TBA2_PELFA -5.63E+002 -1.35E+003
1.09E+003 1.82E+003 -25 43972.36 46729.96 TBA2_SCHPO -3.69E+002
-6.06E+002 7.84E+002 1.06E+003 -23 44413.68 47084.43 TBA2_STYLE
-1.52E+002 -1.20E+003 1.42E+003 1.87E+003 -21 43462.96 45794.68
TBA3_ARATH -1.37E+002 -6.23E+002 1.31E+003 1.45E+003 -23 43767.64
46340.56 TBA3_CHICK 9.52E+001 -1.35E+003 4.35E+002 1.42E+003 -11
31862.21 34076.89 F TBA3_DROME 8.39E+001 -5.89E+002 9.56E+002 1.13E+003
-22 44025.38 46744.36 TBA3_ELEIN -2.23E+002 -1.06E+003 7.94E+002
1.34E+003 -24 43622.68 45927.05 TBA3_HOMAM -4.66E+002 -1.35E+003
9.96E+002 1.74E+003 -24 44023.88 46424.8 TBA3_HORVU 1.67E+002
-2.61E+002 1.19E+003 1.23E+003 -24 43774.25 46614.74 TBA3_MAIZE
-2.26E+002 -9.73E+002 1.25E+003 1.60E+003 -20 43523.21 45861.11
TBA3_MOUSE -7.89E+001 -1.27E+003 7.92E+002 1.49E+003 -23 44045.61
46631.11 TBA3_YEAST -3.29E+001 -1.38E+003 7.81E+001 1.38E+003 -20
43772.88 46394.31 TBA4_CHICK -7.55E+001 -1.23E+003 1.34E+003 1.82E+003
-19 31763.1 34085.01 F TBA4_DROME -4.56E+002 -9.92E+002 8.14E+002
1.36E+003 -18 44749.62 46802.21 TBA4_HUMAN -4.56E+001 -7.37E+002
1.29E+003 1.49E+003 -24 44006.12 46802.17 TBA4_MAIZE 1.91E+002
5.47E+002 5.31E+002 7.86E+002 -13 5653.1 6441.79 F TBA5_CHICK
-5.61E+002 -8.51E+002 9.93E+002 1.42E+003 -24 44001.41 46787.46
TBA5_MAIZE 1.18E+002 -3.59E+002 1.20E+003 1.26E+003 -24 43664.32
46180.91 TBA6_ARATH -4.74E+002 -9.38E+002 1.03E+003 1.47E+003 -23
43549.12 45981.06 TBA6_HUMAN -1.51E+002 -8.12E+002 9.12E+002 1.23E+003
-23 44019.72 46935.74 TBA6_MAIZE 1.05E+002 -2.29E+002 1.28E+003
1.30E+003 -24 43616.26 45962.24 TBA6_MOUSE -4.97E+002 -8.04E+002
8.36E+002 1.26E+003 -23 44005.43 46878.15 TBA8_CAEEL 4.38E+001
-1.35E+003 6.07E+002 1.48E+003 -21 44092.19 46452.13 TBA8_CHICK
-3.14E+002 -1.21E+003 6.74E+002 1.42E+003 -17 31941.5 34147.91 F
TBA8_HUMAN -2.56E+002 -1.13E+003 6.47E+002 1.33E+003 -24 44108.74
46846.78 TBA8_MOUSE 2.58E+001 -9.76E+002 5.25E+002 1.11E+003 -23
44094.24 46772.18 TBA_AJECA 4.11E+002 -5.71E+002 -3.80E+002 8.00E+002
-11 40915.67 42810.21 F TBAA_PNECA 4.02E+002 -4.58E+002 -3.47E+002
7.01E+002 0 21163.74 22925.51 F TBAA_SCHCO 6.78E+000 -9.52E+002
6.63E+002 1.16E+003 -20 43528.88 46457.95 TBA_AVESA 4.40E+002
-3.62E+002 3.57E+002 6.72E+002 -17 43193.08 45318.02 TBA_BLEJA
-1.14E+002 4.91E+001 5.37E+001 1.35E+002 -17 4939.05 5726.72 F
TBA_BOMMO -1.56E+002 -1.02E+003 5.91E+002 1.19E+003 -23 44002.66
46587.95 TBAB_SCHCO 1.68E+002 -8.87E+002 1.06E+003 1.39E+003 -17
43480.44 46447.1 TBA_CANAL -2.94E+002 -1.58E+003 1.45E+002 1.61E+003
-20 43827.47 46383.14 TBA_CHLVU -3.40E+002 -1.04E+003 6.60E+002
1.28E+003 -23 43800.27 46511.59 TBA_DICDI -2.65E+002 -8.18E+002
4.88E+002 9.88E+002 -15 44897.67 47487.03 TBAD_PHYPO 7.24E+001
-8.54E+002 1.25E+003 1.51E+003 -22 43832.96 46203.15 TBAE_PHYPO
5.38E+001 -8.04E+002 9.48E+002 1.24E+003 -22 43712.79 46164.96
TBA_EUGGR -5.50E+002 -9.02E+002 7.55E+002 1.30E+003 -23 44007.88
46521.52 TBA_EUPOC 3.58E+000 -8.90E+002 8.98E+002 1.26E+003 -22
43646.63 46268.82 TBA_EUPVA -3.61E+002 -9.45E+002 6.25E+002 1.19E+003
-22 43678.31 46191.85 TBA_HAECO -5.01E+002 -9.24E+002 1.01E+003
1.45E+003 -23 44184.78 46867.6 TBA_LEPSE 0 2420.34 2750.51 F TBA_LYTPI
-8.32E+002 -1.07E+003 1.57E+003 2.07E+003 -11 15959.86 17858.74
TBA_MYCGR 1.31E+001 -1.13E+003 8.25E+001 1.13E+003 -24 43927.86
46753.33 TBA_NAEGR -4.44E+002 -1.04E+003 3.75E+002 1.19E+003 -23
44031.56 47036.09 TBA_NOTVI -1.47E+002 -8.20E+002 1.11E+003 1.39E+003
-24 44167.23 47197.14 TBAN_PHYPO -1.15E+002 -9.60E+002 8.97E+002
1.32E+003 -23 43607.45 45977.08 TBA_OCTDO -1.92E+002 -1.38E+003
1.19E+003 1.84E+003 -22 44189.74 46624.65 TBA_OCTVU -3.40E+002
-1.21E+003 1.28E+003 1.79E+003 -12 23897.38 25881.13 F TBA_ONCKE
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TBA_OXYGR -8.66E+001 -1.08E+003 8.99E+002 1.41E+003 -23 43713.34
46373.82 TBA_PICAB -1.02E+002 -9.19E+001 -1.23E+002 1.84E+002 -10
11088.01 12137.53 F TBA_PIG -4.06E+002 -1.20E+003 6.32E+002 1.42E+003
-25 44083.31 46762.84 TBA_PLAFK -6.63E+002 -1.02E+003 1.09E+003
1.64E+003 -22 44159.95 46868.83 TBA_PLAYO -4.57E+002 -9.08E+002
9.83E+002 1.41E+003 -12 19399.72 20787.14 F TBA_PRUDU -2.93E+002
-1.09E+003 7.65E+002 1.36E+003 -23 43611.95 46257.89 TBA_SORMA
-5.77E+001 -5.78E+002 8.84E+002 1.06E+003 -23 43781.31 46691.13
TBA_TETPY 1.49E+002 -8.36E+002 8.32E+002 1.19E+003 -21 43728.45
46142.49 TBA_TETTH -5.13E+001 -7.26E+002 8.46E+002 1.12E+003 -21
43757.64 46334.88 TBAT_ONCMY -1.81E+002 -1.07E+003 8.98E+002 1.41E+003
-23 44043.36 46640.52 TBA_TORMA -2.02E+002 -1.15E+003 6.45E+002
1.33E+003 -24 44318.53 47358.43 TBA_TOXGO 2.03E+002 -1.08E+003
1.11E+003 1.56E+003 -23 44098.44 46708.74 TBATRYBR -1.72E+002
-1.00E+003 8.63E+002 1.33E+003 -24 43867.8 46476.58 TBA_TRYCR
-3.14E+002 -1.05E+003 9.14E+002 1.42E+003 -25 43758.17 46172.03
TBA_WHEAT 2.00E+002 -6.80E+002 1.39E+003 1.56E+003 -24 43805.34 46562.2
TBA_XENLA -2.31E+002 -1.10E+003 6.83E+002 1.31E+003 -23 43943 46478.64
TBB1_ANEPH -2.40E+002 -6.68E+002 1.53E+003 1.69E+003 -21 43331.36
45949.82 F TBB1_ARATH -1.22E+003 -1.02E+003 2.69E+003 3.13E+003 -27
43751.93 46146.83 TBB1_AVESA -8.00E+002 -1.71E+003 2.56E+003 3.18E+003
-25 38101.3 41156.74 TBB1_BRUPA -2.70E+002 -6.98E+002 1.81E+003
1.96E+003 -26 43981.4 46705.33 TBB1_CHICK -1.13E+003 -1.02E+003
1.51E+003 2.15E+003 -25 43815.13 46865.04 TBB1_CHOCR -6.25E+002
2.36E+002 1.77E+003 1.89E+003 -27 43977.7 45918.5 TBB1_COLGL -1.39E+003
-1.22E+003 3.07E+003 3.58E+003 -24 43616.55 45527.47 TBB1_COLGR
-2.58E+002 -6.84E+002 2.23E+003 2.35E+003 -24 43341.08 45417.82
TBB1_CYAPA -1.03E+003 -1.03E+003 1.46E+003 2.06E+003 -25 43703.53
46639.47 TBB1_DAUCA -1.29E+003 -4.57E+002 2.76E+003 3.08E+003 -17
31337.94 33360.35 TBB1_ELEIN -1.10E+003 -1.03E+003 2.71E+003 3.10E+003
-26 43749.89 46609.62 TBB1_EMENI -3.24E+002 -1.74E+003 1.74E+003
2.48E+003 -23 43750.84 46675.24 TBB1_GADMO -1.02E+003 -1.16E+003
1.20E+003 1.95E+003 -25 43817.93 47122.12 TBB1_GEOCN -9.55E+002
-9.87E+002 1.33E+003 1.91E+003 -24 43808.6 46274.2 TBB1_HOMAM
-1.24E+003 -1.24E+003 2.66E+003 3.19E+003 -24 44266.15 45948.21
TBB1_HUMAN -4.95E+002 -1.36E+003 2.04E+003 2.50E+003 -25 43765.02
46853.55 TBB1_LUPAL -1.56E+003 -1.20E+003 2.93E+003 3.53E+003 -25
43898.24 46734.22 TBB1_MAIZE -8.98E+002 -1.44E+003 2.28E+003 2.84E+003
-25 43776.83 46781.39 TBB1_MANSE 3.26E+001 -4.73E+002 1.77E+003
1.83E+003 -25 44083.08 46838.17 TBB1_NOTCO -9.76E+002 -1.32E+003
2.51E+003 3.00E+003 -25 43698.37 46442.69 TBB1_ORYSA -1.04E+003
-1.14E+003 1.59E+003 2.22E+003 -25 43757.44 46832.09 TBB1_PARTE
-1.64E+002 -1.30E+003 1.62E+003 2.08E+003 -24 43491.13 46266.33
TBB1_PEA -1.68E+003 -1.21E+003 3.14E+003 3.76E+003 -26 44208.97
46988.05 F TBB1_PHYPO -2.55E+002 -9.30E+002 1.51E+003 1.79E+003 -23
TBB1_PORPU -9.28E+002 -9.18E+002 2.05E+003 2.43E+003 -28 43887.44
47046.49 F TBB1_RAT -1.24E+003 -1.25E+003 2.47E+003 3.04E+003 -25
43855.58 46823.88 TBB1_SOLTU -1.31E+003 -1.08E+003 3.00E+003 3.45E+003
-26 43921.08 45964.17 TBB1_SOYBN -1.99E+002 -1.02E+003 1.77E+003
2.06E+003 -22 43716.86 46392.04 TBB1_TRIVI -2.09E+002 -1.21E+003
1.46E+003 1.91E+003 -21 43239.19 45386.6 TBB1_VOLCA -5.67E+002
-1.31E+003 1.89E+003 2.37E+003 -24 43622.7 46596.3 TBB1_WHEAT
-8.62E+002 -8.33E+002 2.00E+003 2.33E+003 -25 44053.19 47377.04
TBB2_ANEPH -2.34E+002 -1.01E+003 1.48E+003 1.81E+003 -18 40451.27
43579.53 TBB2_ARATH -1.86E+003 -8.40E+002 3.47E+003 4.03E+003 -27
44380.25 47532.89 TBB2_CAEEL -1.22E+003 -1.30E+003 2.60E+003 3.15E+003
-24 44042.41 46516.26 TBB2_CHICK -9.85E+002 -1.18E+003 2.51E+003
2.94E+003 -24 43790.78 46641.57 TBB2_COLGL 4.51E+001 -1.25E+003
2.44E+003 2.74E+003 -24 43772.28 46801.36 TBB2_COLGR -6.48E+002
-1.73E+003 2.32E+003 2.96E+003 -24 43776.26 46725.65 TBB2DAUCA
-3.80E+002 -1.04E+003 1.48E+003 1.85E+003 -25 43469.26 46734.07
TBB2_DROER -1.53E+003 -1.19E+003 3.02E+003 3.59E+003 -25 43757.19
46469.02 TBB2_DROME -1.08E+003 -1.15E+003 2.59E+003 3.03E+003 -26
43646.93 46257.22 TBB2_ELEIN -5.42E+002 -6.38E+002 2.37E+003 2.52E+003
-26 44115.31 47287.17 TBB2_EMENI -3.49E+002 -1.26E+003 2.11E+003
2.48E+003 -22 43740.18 46549.31 TBB2_ERYPI -1.03E+003 -1.43E+003
1.94E+003 2.62E+003 -22 43844.47 46799.54 TBB2_GEOCN -1.16E+003
-5.41E+002 2.71E+003 3.00E+003 -28 44192.98 46317.34 TBB2_HOMAM
-4.43E+002 -9.20E+001 2.03E+003 2.08E+003 -24 44467.04 45943.42
TBB2_HUMAN -1.83E+002 -1.53E+003 1.72E+003 2.31E+003 -25 43874.46
47063.85 TBB2_LUPAL -1.68E+003 -1.16E+003 3.46E+003 4.02E+003 -26
44006.64 46759.35 TBB2_MAIZE -9.72E+002 -1.25E+003 2.49E+003 2.95E+003
-23 43627.92 46573.3 TBB2_ORYSA -7.82E+002 -1.02E+003 1.61E+003
2.06E+003 -25 44025.13 47076.73 TBB2_PEA -1.87E+003 -1.43E+003
2.80E+003 3.66E+003 -28 44119.64 47264.21 TBB2_PHYPO -1.62E+003
-9.87E+002 3.29E+003 3.80E+003 -24 44197.53 47050.16 TBB2_PORPU
-8.84E+002 -5.18E+002 1.80E+003 2.07E+003 -27 41546.31 44676.99
TBB2_SOLTU -9.18E+002 -1.31E+003 2.27E+003
2.78E+003 -26 44046.81 46135.05 TBB2_SOYBN -1.21E+003 -1.42E+003
2.75E+003 3.32E+003 -26 44355.5 47559.1 TBB2_TRIVI -5.10E+002
-9.99E+002 2.41E+003 2.66E+003 -24 43739.12 46059.81 TBB2_WHEAT
-1.29E+003 -8.96E+002 3.24E+003 3.61E+003 -27 43864.6 46565.28
TBB2_XENLA -8.81E+002 -8.68E+002 1.96E+003 2.32E+003 -24 43639.84
46526.04 TBB3_ANEPH -7.63E+002 -8.82E+002 1.87E+003 2.20E+003 -9
24028.31 25945.03 F TBB3_CHICK -1.48E+003 -1.08E+003 3.01E+003
3.52E+003 -26 43756.1 46490.85 TBB3_DROME -1.29E+003 -1.65E+003
2.45E+003 3.22E+003 -23 44396.18 46320.02 TBB3_ELEIN -1.51E+003
-1.19E+003 2.31E+003 3.00E+003 -27 43974.3 47141.63 TBB3_MAIZE
-1.40E+003 -1.05E+003 2.84E+003 3.34E+003 -25 43485.86 46040.71
TBB3_ORYSA -1.39E+003 -9.58E+002 2.79E+003 3.26E+003 -27 43797.24
46373.71 TBB3_PEA -1.46E+003 -1.53E+003 2.81E+003 3.52E+003 -27
43323.16 46648.94 F TBB3_PORPU -1.17E+003 -1.14E+003 2.60E+003
3.07E+003 -26 43529.91 46185.14 TBB3_SOYBN 4.79E+002 -1.01E+003
-2.15E+002 1.14E+003 -9 40339.02 43199.08 F TBB3_WHEAT -1.42E+003
-1.03E+003 3.02E+003 3.49E+003 -28 43670.95 46343.03 TBB4_ARATH
-1.06E+003 -1.21E+003 2.38E+003 2.87E+003 -25 43750.97 46535.59
TBB4_CAEEL -1.01E+003 -1.29E+003 1.88E+003 2.49E+003 -24 43683.61
46649.3 TBB4_CHICK -1.14E+003 -1.37E+003 2.71E+003 3.24E+003 -24
44048.85 46490.78 TBB4_ELEIN -1.14E+003 -9.75E+002 2.27E+003 2.72E+003
-25 43906.03 46993.99 TBB4_HUMAN -1.15E+003 -8.25E+002 2.06E+003
2.49E+003 -25 44223.15 47073.77 TBB4_MAIZE -1.01E+003 -9.45E+002
2.18E+003 2.58E+003 -24 43757.47 46283.88 TBB4_PORPU -1.71E+003
-1.27E+003 2.68E+003 3.42E+003 -28 44129.26 47186.23 TBB4_WHEAT
-7.03E+002 -1.24E+003 2.34E+003 2.75E+003 -25 43821.6 47046.07
TBB4_XENLA -1.18E+003 -1.11E+003 2.71E+003 3.16E+003 -24 43722.48
46674.76 TBB5_ARATH -1.80E+003 -1.08E+003 3.25E+003 3.86E+003 -28
44001.8 46634.56 TBB5_CHICK -7.93E+002 -1.16E+003 2.21E+003 2.62E+003
-25 43891.79 46604.44 TBB5_ECTVR -1.27E+003 -1.16E+003 2.72E+003
3.22E+003 -25 43750.92 46441.18 TBB5_HUMAN -8.71E+002 -1.12E+003
1.95E+003 2.41E+003 -24 43580.58 46339.09 TBB5_MAIZE -1.23E+003
-1.21E+003 2.47E+003 3.01E+003 -24 43798.93 46550.2 TBB5_WHEAT
-7.11E+002 -7.94E+002 2.47E+003 2.69E+003 -26 44109.94 47148.65
TBB6_ARATH -1.78E+003 -1.24E+003 2.49E+003 3.30E+003 -28 44352.88
47605.4 TBB6_CHICK -1.10E+001 -1.14E+003 1.81E+003 2.14E+003 -20
44013.78 46378.76 TBB6_ECTVR -1.19E+003 -1.20E+003 2.80E+003 3.27E+003
-24 43894.94 46566.79 TBB6_MAIZE -8.83E+002 -1.00E+003 1.53E+003
2.03E+003 -25 44054.31 47248.64 TBB7_ARATH -1.53E+003 -1.27E+003
3.15E+003 3.72E+003 -26 44339.38 47096.68 TBB7_CAEBR -2.49E+002
-1.05E+003 1.53E+003 1.87E+003 -21 43204.36 45682.33 TBB7_CAEEL
-1.65E+002 -9.89E+002 1.48E+003 1.79E+003 -19 43248.82 45913.33
TBB7_CHICK -1.07E+003 -1.20E+003 2.50E+003 2.97E+003 -24 43586.17
46372.26 TBB7_MAIZE -1.62E+003 -1.02E+003 3.29E+003 3.81E+003 -28
43810.2 46505.18 TBB8_ARATH -1.44E+003 -1.09E+003 3.25E+003 3.72E+003
-25 44295.12 47021.18 TBB8_MAIZE -2.88E+002 -1.30E+003 1.98E+003
2.39E+003 -25 43821.89 47069.82 TBB9_ARATH -1.85E+002 -1.19E+003
1.87E+003 2.22E+003 -27 43541.37 46710.21 TBB_ACHKL -1.49E+003
-1.18E+003 2.78E+003 3.37E+003 -27 43582.08 46093.01 TBB_ACRCO
-2.96E+002 -1.68E+003 2.83E+003 3.31E+003 -25 44030.34 47131.02
TBB_AJECA -1.90E+001 -1.42E+003 1.43E+003 2.02E+003 -17 43899.95
46111.64 TBB_ASPFL -1.25E+003 -1.07E+003 3.51E+003 3.88E+003 -23
43818.01 46347.28 TBB_ASPPA -1.09E+003 -1.17E+003 3.41E+003 3.77E+003
-23 43974.21 46807.66 TBB_BABBO -7.24E+001 -9.18E+002 9.11E+002
1.30E+003 -22 43389.67 46335.4 TBB_BOMMO -1.75E+002 -1.61E+003
3.52E+003 3.87E+003 -25 44236.29 47190.27 TBB_BOTCI -8.12E+001
-1.52E+003 2.48E+003 2.91E+003 -22 43733.8 46687 TBB_CANAL -7.66E+002
-1.32E+003 2.58E+003 3.00E+003 -27 43649.84 45896.27 TBB_CEPAC
-6.54E+002 -1.75E+003 2.46E+003 3.09E+003 -24 43755.92 46590.03
TBB_CHLIN -8.12E+002 -1.08E+003 2.18E+003 2.56E+003 -24 43440.63
46047.48 TBB_CHLRE -7.63E+002 -1.04E+003 1.67E+003 2.11E+003 -24
43580.97 46513.44 TBB_CICAR -1.47E+003 -1.26E+003 2.76E+003 3.37E+003
-26 44093.85 46346.37 TBB_DICDI -2.34E+002 -3.61E+002 2.34E+003
2.38E+003 -25 44756.23 46368.54 TBB_EIMTE -8.00E+002 -1.16E+003
2.38E+003 2.76E+003 -24 43849.31 46691.1 TBB_EPITY -1.72E+002
-9.30E+002 2.54E+003 2.71E+003 -24 43981.99 47087.79 TBB_ERYGR
-1.11E+003 -1.62E+003 2.49E+003 3.17E+003 -21 43521.09 46022.36
TBB_EUGGR -5.27E+002 -9.96E+002 1.74E+003 2.08E+003 -28 43338.8
45940.86 TBB_EUPCR -1.29E+003 -1.16E+003 2.41E+003 2.97E+003 -26
43733.12 46318.45 TBB_EUPFO -3.46E+002 -9.23E+002 2.17E+003 2.38E+003
-23 43736.75 46621.81 TBB_EUPOC -1.09E+003 -1.05E+003 2.34E+003
2.79E+003 -25 43474.13 46098.76 TBB_GIALA -1.11E+003 -9.79E+002
2.43E+003 2.85E+003 -24 43973.16 47134.22 TBB_GIBFU -1.09E+003
-1.15E+003 3.42E+003 3.76E+003 -24 43717.6 46450.54 TBB_HALDI 2.70E+002
-1.27E+003 5.88E+002 1.43E+003 -5 33789.64 36441.03 F TBB_HORVU
-1.62E+003 -1.07E+003 3.28E+003 3.82E+003 -27 43828.44 46711.06
TBB_LEIME -4.57E+002 -1.16E+003 1.79E+003 2.18E+003 -25 43640.51
46103.21 TBB_LYMST -4.11E+002 9.15E+001 1.44E+003 1.50E+003 -16
11210.57 12653.09F TBB_LYTPI -1.31E+003 -6.00E+002 3.00E+003 3.33E+003
-13 17813.1 19768.08F TBB_MYCPJ -1.06E+003 -1.44E+003 3.06E+003
3.54E+003 -22 43590.41 46322.14 TBB_NAEGR -9.11E+002 -1.50E+003
2.96E+003 3.44E+003 -26 44385.1 47524.01 TBB_NEUCR -8.67E+002
-1.30E+003 3.63E+003 3.95E+003 -24 43678.94 46401.01 TBB_OCTDO
-7.15E+002 -5.08E+002 1.86E+003 2.06E+003 -23 44106.16 46618.28
TBB_ONCGI -7.02E+002 -1.07E+003 2.06E+003 2.42E+003 -21 43865.63
46450.72 TBB_PARLI -1.51E+003 -1.20E+003 3.26E+003 3.78E+003 -26
43883.1 46679.47 TBB_PENDI -4.37E+002 -1.44E+003 2.26E+003 2.71E+003
-21 43814.64 46891.07 TBB_PESMI -3.95E+002 -1.50E+003 2.53E+003
2.97E+003 -24 43722.64 46550.51 TBB_PHANO -7.61E+002 -1.12E+003
2.67E+003 2.99E+003 -21 43777.75 46470 TBB_PHYCI -6.90E+002 -1.01E+003
1.92E+003 2.27E+003 -24 43659.2 46213.31 TBB_PIG -3.59E+002 -1.55E+003
1.91E+003 2.48E+003 -25 43854.42 47042.18 TBB_PLASA -6.56E+002
-1.43E+003 1.55E+003 2.21E+003 -28 43731.91 46620.07 TBB_PLAFK
-1.06E+003 -1.24E+003 1.40E+003 2.14E+003 -27 43684.84 46607.02
TBB_PLESA -1.51E+003 -1.06E+003 2.51E+003 3.12E+003 -25 44047.21
46981.21 TBB_PNECA 5.85E+001 -7.05E+002 1.77E+003 1.90E+003 -22
43093.29 45488.54 TBB_POLAG -9.12E+002 -1.12E+003 2.29E+003 2.71E+003
-24 43428.91 45898.77 TBB_PSEAM -1.11E+003 -1.06E+003 1.54E+003
2.18E+003 -25 43784.36 46877.34 TBBQ_HUMAN -2.77E+002 -7.68E+002
5.86E+002 1.00E+003 -18 42440.37 44994.21 TBB_RHYSE -1.13E+003
-1.49E+003 3.08E+003 3.60E+003 -21 43739.88 46423.03 TBB_SCHCO
-7.83E+002 -1.13E+003 1.60E+003 2.11E+003 -25 43970.42 46854.63
TBB_SCHPO -4.48E+002 -8.91E+002 2.11E+003 2.33E+003 -27 43446.86
45913.99 TBB_STRPU -6.17E+002 -1.36E+003 3.07E+003 3.41E+003 -18
29275.73 31526.12 F TBB_STYLE -9.53E+002 -1.02E+003 2.15E+003 2.56E+003
-24 43277.04 45763.19 TBB_TETPY -5.66E+002 -8.36E+002 1.78E+003
2.05E+003 -24 43557.91 46339.63 TBB_TETTH -5.22E+002 -8.68E+002
1.71E+003 1.99E+003 -25 43553.05 46384.46 TBB_THAWE -9.42E+002
-1.14E+003 2.35E+003 2.78E+003 -23 43337.8 45963.07 TBB_TOXGO
-1.44E+003 -1.21E+003 2.28E+003 2.96E+003 -27 43887.58 46652.72
TBB_TRYBR -9.50E+001 -1.16E+003 1.42E+003 1.84E+003 -24 43475.69
45924.44 TBB_TRYCR -5.27E+002 -1.06E+003 1.56E+003 1.96E+003 -25
43396.83 45908.56 TBB_VENIN -1.12E+003 -1.36E+003 3.10E+003 3.56E+003
-22 43549.74 46256.71 TBBX_HUMAN -1.07E+003 -1.20E+003 2.50E+003
2.97E+003 -24 43586.17 46372.26 TBB_YEAST -1.38E+003 -3.14E+002
3.25E+003 3.54E+003 -31 44568.68 47245.65 TBD_HUMAN -2.52E+002
-1.29E+003 3.67E+002 1.36E+003 -5 44650.69 45579.63 TBE_HUMAN 5.31E+002
-4.99E+002 4.47E+002 8.55E+002 -6 TBG1_HUMAN 7.16E+002 -1.58E+003
-6.03E+002 1.84E+003 -10 44645.36 45231.14 TBG1_MAIZE 8.07E+002
-1.90E+003 -3.86E+002 2.10E+003 -10 46058.94 46110.79 TBG1_MOUSE
5.56E+002 -1.71E+003 -8.73E+002 2.00E+003 -11 44751.95 45706.51
TBG2_ARATH 1.46E+003 -2.04E+003 5.26E+002 2.56E+003 -10 46598.89
47773.51 TBG2_DROME 8.15E+002 -1.58E+003 -8.50E+002 1.97E+003 -6
44800.18 45401.53 TBG2_EUPCR 3.78E+002 -1.86E+003 -7.45E+002 2.04E+003
-15 45632.97 46882.17 TBG2_EUPOC 4.42E+001 -2.22E+003 -3.12E+002
2.24E+003 -10 45771.97 47628.98 TBG2_HUMAN 5.46E+002 -1.57E+003
-3.46E+002 1.70E+003 -13 44707.12 45746.7 TBG2_MAIZE 4.62E+002
-1.85E+003 -5.21E+002 1.98E+003 -12 TBG2_MOUSE 3.57E+002 -1.22E+003
-6.91E+002 1.45E+003 -10 44770.54 45966.96 TBG2_ORYSA 7.37E+002
-1.71E+003 -6.59E+002 1.97E+003 -12 46151.43 46463.29 TBG3_MAIZE
7.36E+002 -1.95E+003 -1.05E+002 2.09E+003 -9 41586.56 42200.31 F
TBG_ANEPH 1.48E+003 -2.35E+003 3.46E+002 2.79E+003 -9 46391.54 47490.67
TBG_CAEEL 3.04E+002 -1.06E+003 -8.91E+002 1.42E+003 -9 43944.74
45972.73 TBG_CANAL 1.34E+003 -1.39E+003 1.90E+003 2.71E+003 -23
TBG_CHLRE 7.24E+002 -1.85E+003 -3.37E+002 2.02E+003 -6 45684.61 46543.6
TBG_COCHE 4.43E+002 -8.17E+002 -5.81E+002 1.10E+003 -2 26054.95
27657.99 F TBG_EMENI 7.59E+002 -1.72E+003 -7.19E+002 2.01E+003 -9
44602.99 46275.01 TBG_ENTHI 1.65E+002 -9.20E+002 -8.38E+002 1.26E+003
-6 45398.09 46350.19 TBG_EUPAE 7.82E+002 -1.99E+003 -3.07E+002
2.16E+003 -10 45766.71 47108.63 TBG_NEUCR 5.63E+002 -1.98E+003
-3.09E+002 2.08E+003 -9 45255.26 46777.78 TBG_PHYPA 1.25E+003
-2.49E+003 2.51E+001 2.78E+003 -8 46549.14 47781.9 TBG_PLAFO 6.66E+002
-2.18E+003 -7.53E+002 2.40E+003 -7 45179.34 46542.13 TBG_RETFI
1.16E+003 -1.59E+003 -5.16E+002 2.04E+003 -4 47100.48 48598.68
TBG_SCHJP 1.95E+000 -1.81E+003 -6.21E+002 1.91E+003 -7 44087.45
45523.53 TBG_SCHPO 3.32E+002 -1.54E+003 -3.58E+002 1.62E+003 -8
43930.03 45423.04 TBG_USTVI 7.32E+002 -1.61E+003 -8.74E+002 1.97E+003
-10 45915.36 47039.01 TBG_XENLA 8.58E+002 -1.48E+003 -8.55E+002
1.91E+003 -9 44698.46 45367.78 TBG_YEAST 9.08E+002 -1.50E+003 1.31E+003
2.19E+003 -30 45777.95 47349.09
[0074] As is also disclosed in the Tuszynski paper,
"FIG. 1a shows a scatter diagram of the net/charge/volume ratios of the
different tubulins. This plot is striking in that the net charge on the
beta-tubulins is bar far the greatest, ranging between -17 and -32
elementary charges (e) depending upon the particular beta-tubulin with
an average value in this case at approximately -25e. Next comes the
alpha-tubulins whose net charges vary between -10 and 1-25 elementary
charges . . . . There appears to be little if any correlation between
the size of a protein and its charge . . . . Further, it should be kept
in mind, that the charge on a tubulin dimmer will be neutralized in
solution due to the presence of counter-ions which almost completely
screen the net charge. This was experimentally determined for tubulin
by the application of an external electric field; the resulting value
of an unscreened charge of approximately 0.2e per monomer was found
Stracke et al. 2002." The reference to Stracke et al. was to an article
by R. Stracke, J. A. Tuszynski, et al. regarding "Analysis of the
migration behaviour of single microtubules in electric fields,"
Biochemical and Biophysical Research Communications, 293:606-609, 2002.
[0075] As is also disclosed in the Tuszynski paper,
"What is, however, of great interest in connection with polymerization
of tubulin into microtubules and with drug-protein binding is the
actual distribution of charges on the surface of the tublin. FIG. 3
illustrates this for the Downing-Nogales structure with plus signs
indicating the regions of positively charged and minus signs negatively
charged locations. This figure shows C-termini in two very upright
positions. Of course, each of the different tubulins will show
differences in this regard . . . ."
[0076] As is also disclosed in the Tuszynski paper,
" . . . alpha tubulins have relatively low dipole moments about their
centres-of-mass, ranging between 1000 and 2000 Debye, while the
beta-tubulins are very high in this regard with the corresponding
values ranging between 1000 and 4000 Debye and with the average value
close to 3000 Debye . . . . In FIG. 2 we have illustrated the important
aspect of dipole organization for tubulin, namely its orientation. FIG.
2a shows a Mollweide projection of dipole orientation in tubulin . . .
. We conclude from this diagram and its magnification . . . that both
alpha- and beta-tubulins orient their dipose moments in a direction
that is close to being perpendicular to the microtubule surface . . .
."
[0077] As is also disclosed in the Tuszynski paper,
"FIG. 1c shows the logarithm of surface area against the logarithm of
volume for the different tubulins . . . . Note that the alpha and beta
families have a very similar slope with a value close to the unity that
is indicative of cylindrical symmetry in the overall geometry . . . ."
[0078] As is also disclosed in the Tuszynski paper,
"Our models show that only alpha- and beta-tubulins have C-termini that
project outwards from the tubulin, due to their high negative charges.
FIG. 5 shows the energy levels of different orientational positons of
the C-termini in a toy model and suggests that there is relatively
little energetic difference between projecting straight outward from
the rest of the tublin and lying on the surface of tubulin in certain
energy minima . . . ."
[0079] As is also disclosed in the Tuszynski et al.
paper, "Isotype compositon has a demonstrable effect on microtubule
assembly kinetics (Panda et al., 1994)." The Panda et al. reference was
an article by D. Panda et al. on "Microtubule dynamics in vitro are
regulated by the tubulin isotype composition," Proc. Natl. Acad. Sci.
USA 91: 11 358-11 362, 1994.
[0080] As is also disclosed in the Tuszynski paper,
"This could be due to changes in the electrostatics of tubulin, which
although significantly screened by counter-ions does affect microtubule
assembly by influencing dimer-dimer interactions over relatively short
distances (approximagely 5 nm) as well as the kinetics of assembly.
These short-range interactions have recently been studied by Sept et
al. (2003) by calculating the energy of protofilament-protofilament
interactions. These authors concluced from their work that the two
types of microtubule lattices (A and B) correspond to the local energy
minima." The Sept et al. reference was to an article by D. Sept et al.,
"The physical basis of microtubule structure and stability," Protein
Science, 12:2257-2261, 2003.
[0081] As is also disclosed in the Tuszynski paper,
"The dipole moment could play a role in microtubule assembly and in
other processes. This could be instrumental in the docking process of
molecules to tubulin and in the proper steric configuration of a
tubulin dimer as it approaches a microtubule for binding. An isolated
dimer has an electric field dominated by its net charge . . . . In
contrast, a tubulin dimer . . . surrounded by water molecules and
counter-ions, as is physiologically relevant, has an isopotential
surface with two lobes much like the dumbbell shape of a mathematically
dipole moment. The greater the dipole of of each of its units is, the
less stable the microtubule since dipole-dipole interactions provide a
positive energy disfavoring a microtubule structure. Note that the
strength of the interaction potential is proportional to the square of
the dipole moment, hence microtubule structuresformed from tubulin
units with larger dipoles momements should be more prone to undergo
disassembly catastrophes compoared to those microtubles that contain
low dipole moment tubulins. For organisms that express more than one
type of tubulin isotype in the same cell, one can conceive that
microtubule dynamic behavior could be regulated by altering the
relative amounts of the different isotypes according to their dipole
moments."
[0082] As is also disclosed in the Tuszynski paper,
"In terms of surface/volume ratios, .alpha.- and .beta.-tubulin are the
least compact, while .gamma., .delta. and .epsilon. are the most
compact. There is abundant evidence that both .alpha. and .beta. have
flexible conformations. This is attested to by their interaction with
drugs and is consistent with the dynamic instability of microtubules.
In contrast, there is as yet no evidence of dynamic instability in
.gamma., .delta. and .epsilon. partcipating in dynamic instability, nor
is there any theoretical reason to imagine such flexibility. It is
reasonable to postulate that a less compact structure may have a more
flexible conformation."
[0083] As is also disclosed in the Tuszynski et al.
paper, "Our models predict that the C-termini of .alpha. and .beta. can
readily adopt the two extreme conformations: either projecting outwards
from the tubulin (and the microtubule surface) or to lie on the
surface, albeit such that theircharged residues can form electrostatic
bonds with complimentary charges on the surface. The state of the
C-terminus (upright, down, or in intermediate states) down) is easily
influenced by the local ion concentration including pH. This
conformational complexity has many implications (Pal et al., 2001)."
The Pal et al. reference is an article by D. Pal et al. on
"Conformational properties of alpha-tubulin tail peptide: implications
for tail-body interaction," Biochemistry, 40: 15 512-15 519, 2001.
[0084] As is also disclosed in the Tuszynski paper,
"First, a projecting C-terminus could play a major role in signaling.
The fact that tubulin isotypes differ markedly in the C-termini
suggests that specific sequences may mediate the functional roles of
the isotypes. These sequences would be readily available for
interactions with other proteins in a projecting C-terminus. Second,
the C-termini are the sites of many of the post-translational
modifications of tubulin--polyglutamylation, polyglycylation,
detyrosinolation/tyrosinolation, removal of the penultimate glutamic
acid, and phosphorylation of serine and tyrosine (Redeker et al.,
1998)." The Redeker et al. reference was an article by V. Redekere et
al. on "Posttranslational modifications of the C-terminus of
alpha-tubulin in adult rat brain: alpha 4 is glutamylated at two
residues," Biochemistry, 37: 14 838-14 844, 1998.
[0085] As is also disclosed in the Tuszynski paper,
"It is known that the C-termini are essential to normal microtubule
function (Duan and Gorovsky, 2002); a projecting C-terminus would be
easily accessible to enzymes that affect these modifications and also
the modification could influence the likelihood of the C-terminus
changing conformation. In addition, if the modification plays a role in
signaling then the signal would be readily available in a projecting
C-terminus, as already mentioned." The reference to Duan and Gorovsky
is to an article by J. Duan et al., "Both carboxy-termianl tails of
alpha- and beta-tubulin are essential, but either one will suffice,"
Current Biology, 12:313-316, 2002.
[0086] As is also disclosed in the Tuszynski et al.
paper, "Third, projecting C-termini would automatically create spacing
between microtubules. It is known that microtubules are never closely
packed and are surrounded by what is referred to as an exclusion
zone.(Dustin, 1984)." The reference to Dustin is to a book by P. Dustin
on "Microtubules (Springer-Verlag, Berlin, 1984).
[0087] As is also disclosed in the Tuszynski paper,
"This is a region of space around them that strongly disfavors the
presence of other microtubules in the vicinity. Although MAPs could
play a role in such spacing, electrostatic repulsion among C-terminal
ends are likely to influence this as well. The C-termini are the major
sites of binding of the MAPs to tubulin. A projecting C-terminus may
facilitate MAP binding and, conversely, MAP binding could influence the
conformation of the C-terminus. Evidence for this is provided by the
work of Makridis et al who showed that when tau binds to microtubules,
it triggers a structural change on the microtubule surface whereby a
structural element, presumably tau, lies along the surface of the
microtubule forming a lattice whose alingement angle is much sharper
than that of the tubulin subunits. This lattice is presumably
superimposed on top of the normal microtubule (A or B) lattice. The
orientation of the C-termini when they are lying on the surface of the
microtubule form exactly the same kind of lattice that (Makridis et al,
2003) observed, a striking confirmation of the potential accuracy of
our modeling . . . . These results raise the possibility that the
orientation of the C-termini of the alpha and beta subunits determines
the arrangement of tau molecules on the microtubule." The Makrides
reference referred to is an article by V. Markrides et al.,
"Microtubule-dependent oligomerization of tau: Implicatons for
physiological tau function and tauopathies," J. Biol. Chem., 278:33
298-33 304, 2003.
[0088] As is also disclosed in the Tuszynski et al.
paper, " . . . the state of the C-termini could mediate how motor
proteins such as kinesin bind to and move on microtubules. Our models
show that kinesin can only bind to upright C-termini . . . and not to
C-termini lying on the surface of the microtubule . . . . Very minor
changes in the local ionic environment or the pH could halt the
progress of kinesin by collapsing the C-termini. One can postulate that
the proportion of C-termini that are in the upright conformation in a
given portion of the microtubule could determine the actual rate of
kinesin movement. It is likely that such arguments could apply to other
motor proteins as well. One might imagine that the very fine
coordination of movements that occur in processes such as mitosis could
be influenced or even caused by the conformational state of the
C-termini in particular areas of the microtubule."
[0089] As is also disclosed in the Tuszynski paper,
"Finally, one can imagine that the C-termini could collapse in waves
that could simultaneously move a wave of ions that could polarize or
depolarize a membrane. This could be a form of microtubule signaling
that has not yet been considered. A quantitative model of ionic wave
transmission coupled to co-ordinated motion of the C-termini of
dendritic microtubules has been recently developed by Priel et al. . .
. ." The refererence to Priel et al. was to an article by A. Priel et
al. entitled "Moleuclar Dynamics of C-termini in Tubulin: Implications
for Transport to Active Synapsis," submitted to Biophys. J., 2003.
[0090] Table 1 of the Tuszynksi paper disclosed the
tubulin sequences used in the study reported in the article. In such
Table 1, the table names the names the source organism, and for each
.alpha., .beta., .gamma., .delta., and .epsilon., gives the name used
in the databank.
The Use of Particular Models of Isotypes of
Tubulin for Drug Development
[0091] In one embodiment of the invention, once a
particular tubulin isotype has been identified as being of interest,
and once a three-dimensional model of it has been made in accordance
with the process of this invention, this model may then be used to
identify which drug or drugs would most advantageously interact with
the binding sites of the tubulin isotype in question.
[0092] The preferred binding sites which may be
used in the process of identifying the candidate drugs are discussed in
the next section of this specification.
Preferred Binding Sites of Tubulin Isotypes
[0093] It is known that many chemotherapeutic drugs
effect their primary actions by inhibiting tubulin polymerization.
Thus, as is disclosed in U.S. Pat. No. 6,162,930 (the entire disclosure
of which is hereby incorporated by reference into this specification),
"An aggressive chemotherapeutic strategy toward the treatment and
maintenance of solid-tumor cancers continues to rely on the development
of architecturally new and biologically more potent anti-tumor,
anti-mitotic agents. A variety of clinically-promising compounds which
demonstrate potent cytotoxic and anti-tumor activity are known to
effect their primary mode of action through an efficient inhibition of
tubulin polymerization (Gerwick et al.). This class of compounds
undergoes an initial binding interaction to the ubiquitous protein
tubulin which in turn arrests the ability of tubulin to polymerize into
microtubules which are essential components for cell maintenance and
cell division (Owellen et al.)."
[0094] U.S. Pat. No. 6,162,930 also discloses that
the precise means by which the cytotoxic agents " . . . arrests the
ability of tubulin to polymerize . . . " is unknown, stating that:
"Currently the most recognized and clinically useful tubulin
polymerization inhibitors for the treatment of cancer are vinblastine
and vincristine (Lavielle, et al.). Additionally, the natural products
rhizoxin (Nakada, et al., 1993a and 1993b; Boger et al.; Rao et al.,
1992 and 1993; Kobayashi et al., 1992 and 1993) combretastin A-4 and
A-2 (Lin et al.; Pettit, et al., 1982, 1985, and 1987) and taxol
(Kingston et al.; Schiff et al; Swindell, et a, 1991; Parness, et al.)
as well as certain synthetic analogues including the
2-styrylquinazolin-4(3H)-ones (SQO) (Jiang et al.) and highly
oxygenated derivatives of cis- and trans-stilbene (Cushman et al.) and
dihydrostilbene are all known to mediate their cytotoxic activity
through a binding interaction with tubulin. The exact nature of this
interaction remains unknown and most likely varies somewhat between the
series of compounds."
[0095] U.S. Pat. No. 6,512,003 also discusses the "
. . . nature of this unknown interaction . . . ," stating that (at
column 1) "Novel tubulin-binding molecules, which, upon binding to
tubulin, interfere with tubulin polymerization, can provide novel
agents for the inhibition of cellular proliferation and treatement of
cancer." U.S. Pat. No. 6,512,003 presents a general discussion of the
role of tubulin in cellular proliferation, disclosing (also at column
1) that: Cellular proliferation, for example, in cancer and other cell
proliferative disorders, occurs as a result of cell division, or
mitosis. Microtubules play a pivotal role in mitotic spindle assembly
and cell division . . . . These cytoskeletal elements are formed by the
self-association of the ad tubulin heterodimers . . . . Agents which
induce depolymerization of tubulin and/or inhibit the polymerization of
tubulin provide a therapeutic approach to the treatment of cell
proliferation disorders such as cancer. Recently, the structure of the
.alpha..beta. tubulin dimer was resolved by electron crystallography of
zinc-induced tubulin sheets . . . . According to the reported atomic
model, each 46.times.40.times.65 .ANG. tubulin monomer is made up of a
205 amino acid N-terminal GTP/GDP binding domain with a Rossman fold
topology typical for nucleotide-binding proteins, a 180 amino acid
intermediate domain comprised of a mixed .beta. sheet and five helices
which contain the taxol binding site, and a predominantly helical
C-terminal domain implicated in binding of microtubule-associated
protein (MAP) and motor proteins . . . ."
[0096] U.S. Pat. No. 6,512,003 also teaches that
the the binding site of vinca alkaloids to tubulin differs from the
binding site of colchicin to tublin, stating (also at column 1) that:
"Spongistatin (SP) . . . is a potent tubulin depolymerizing natural
product isolated from an Eastern Indian Ocean sponge in the genus
Spongia . . . Spongistatins are 32-membered macrocyclic lactone
compounds with a spongipyran ring system containing 4 pyran-type rings
incorporated into two spiro[5.5]ketal moieties . . . . In cytotoxicity
assays, spongistatin (SP) exhibited potent cytotoxicity with
subnanomolar IC50 values against an NCI panel of 60 human cancer cell
lines . . . . SP was found to inhibit the binding of vinc alkaloids
(but not colchicin) to tubulin . . . , indicating that the binding site
for this potent tubulin depolymerizing agent may also serve as a
binding region for vinc alkaloids."
[0097] U.S. Pat. No. 6,593,374, the entire
disclsoure of which is hereby incorporated by reference into this
specification, presents a "working hypothesis" that the " . . . methoxy
aryl functionality . . . " is especially important for binding at the
colchicin binding site. It discloses (at columns 1-2 thereof) that: "An
important aspect of this work requires a detailed understanding, on the
molecular level, of the `small molecule` binding domain of both the
.alpha. and .beta. subunits of tubulin. The tertiary structure of the
.alpha.,.beta. tubulin heterodimer was reported in 1998 by Downing and
co-workers at a resolution of 3.7 .ANG. using a technique known as
electron crystallography . . . . This brilliant accomplishment
culminates decades of work directed toward the elucidation of this
structure and should facilitate the identification of small molecule
binding sites, such as the colchicine site, through techniques such as
photoaffinity and chemical affinity labeling . . . . We have developed
a working hypothesis suggesting that the discovery of new antimitotic
agents may result from the judicious combination of a molecular
template (scaffold) which in appropriately substituted form (ie.
phenolic moieties, etc.) interacts with estrogen receptor (ER),
suitably modified with structural features deemed imperative for
tubulin binding (arylalkoxy groups, certain halogen substitutions,
etc.). The methoxy aryl functionality seems especially important for
increased interaction at the colchicine binding site in certain analogs
. . . . Upon formulation of this hypothesis concerning ER molecular
templates, our initial design and synthesis efforts centered on
benzo[b]thiophene ligands modeled after raloxifene, the selective
estrogen receptor modulator (SERM) developed by Eli Lilly and Co . . .
. Our initial studies resulted in the preparation of a very active
benzo[b]thiophene-based antitubulin agent . . . . In further support of
our hypothesis, recent studies have shown that certain estrogen
receptor (ER) binding compounds as structurally modified estradiol
congeners (2-methoxyestradiol, for example) interact with tubulin and
inhibit tubulin polymerization . . . . Estradiol is, of course, perhaps
the most important estrogen in humans, and it is intriguing and
instructive that the addition of the methoxy aryl motif to this
compound makes it interactive with tubulin. It is also noteworthy that
2-methoxyestradiol is a natural mammalian metabolite of estradiol and
may play a cell growth regulatory role especially prominent during
pregnancy. The term `phenolic moiety` means herein a hydroxy group when
it refers to an R group on an aryl ring."
[0098] As is also disclsoed in U.S. Pat. No.
6,593,374 (at column 1 thereof), "Tubulin is currently among the most
attractive therapeutic targets in new drug design for the treatment of
solid tumors. The heralded success of vincristine and taxol along with
the promise of combretastatin A-4 (CSA-4) prodrug and dolastatin . . .
, to name just a few, have firmly established the clinical efficacy of
these antimitotic agents for cancer treatment. An aggressive
chemotherapeutic strategy toward the treatment and maintenance of
solid-tumor cancers continues to rely on the development of
architecturally new and biologically more potent anti-tumor,
anti-mitotic agents which mediate their effect through a direct binding
interaction with tubulin. A variety of clinically-promising compounds
which demonstrate potent cytotoxicity and antitumor activity are known
to effect their primary mode of action through an efficient inhibition
of tubulin polymerization . . . . This class of compounds undergoes an
initial interaction (binding) to the ubiquitous protein tubulin which
in turn arrests the ability of tubulin to polymerize into microtubules
which are essential components for cell maintenance and division . . .
. During metaphase of the cell cycle, the nuclear membrane has broken
down and the cytoskeletal protein tubulin is able to form centrosomes
(also called microtubule organizing centers) and through polymerization
and depolymerization of tubulin the dividing chromosomes are separated.
Currently, the most recognized and clinically useful members of this
class of antimitotic, antitumor agents are vinblastine and vincristine
. . . along with taxol . . . . Additionally, the natural products
rhizoxin, . . . combretastatin A-4 and A-2, . . . curacin A, . . .
podophyllotoxin, . . . epothilones A and B, . . . dolastatin 10 . . .
and welwistatin . . . (to name just a few) as well as certain synthetic
analogues including phenstatin, . . . the 2-styrylquinazolin-4(3H)-ones
(SQO), . . . and highly oxygenated derivatives of cis- and
trans-stilbene . . . and dihydrostilbene are all known to mediate their
cytotoxic activity through a binding interaction with tubulin. The
exact nature of this binding site interaction remains largely unknown,
and definitely varies between the series of compounds."
[0099] Published United States patent application
2004/0044059, the entire disclosure of which is hereby incorporated by
reference into this specification, also discloses the uncertaintly that
exists with regard to the " . . . tubulin binding site interactions . .
. ." At page 1 thereof, it states that: "The exact nature of tubulin
binding site interactions remain largely unknown, and they definitely
vary between each class of Tubulin Binding Agent. Photoaffinity
labeling and other binding site elucidation techniques have identified
three key binding sites on tubulin: 1) the Colchicine site (Floyd et
al, Biochemistry, 1989; Staretz et al, J. Org. Chem., 1993; Williams et
al, J. Biol. Chem., 1985; Wolff et al, Proc. Natl. Acad. Sci. U.S.A.,
1991),2) the Vinca Alkaloid site (Safa et al, Biochemistry, 1987), and
3) a site on the polymerized microtubule to which taxol binds (Rao et
al, J. Natl. Cancer Inst., 1992; Lin et al, Biochemistry, 1989; Sawada
et al, Bioconjugate Chem, 1993; Sawada et al, Biochem. Biophys. Res.
Commun., 1991; Sawada et al, Biochem. Pharmacol., 1993). An important
aspect of this work requires a detailed understanding, at the molecular
level, of the `small molecule` binding domain of both the .alpha. and
.beta. subunits of tubulin. The tertiary structure of the
.alpha.,.beta. tubulin heterodimer was reported in 1998 by Downing and
co-workers at a resolution of 3.7 using a technique known as electron
crystallography (Nogales et al, Nature, 1998). This brilliant
accomplishment culminates decades of work directed toward the
elucidation of this structure and should facilitate the identification
of small molecule binding sites, such as the colchicine site, using
techniques such as photoaffinity and chemical affinity labeling (Chavan
et al, Bioconjugate Chem., 1993; Hahn et al, Photochem. Photobiol.,
1992)."
[0100] As is also disclosed in published United
States patent application 2004/0044059, "The cytoskeletal protein
tubulin is among the most attractive therapeutic drug targets for the
treatment of solid tumors. A particularly successful class of
chemotherapeutics mediates its anti-tumor effect through a direct
binding interaction with tubulin. This clinically-promising class of
therapeutics, called Tubulin Binding Agents, exhibit potent tumor cell
cytotoxicity by efficiently inhibiting the polymerization of
.alpha..beta.-tubulin heterodimers into the microtubule structures that
are required for facilitation of mitosis or cell division (Hamel,
Medicinal Research Reviews, 1996) . . . . Currently, the most
recognized and clinically useful antitumor agents are Vinca Alkaloids,
such as Vinblastine and Vincristine (Owellen et al, Cancer Res., 1976;
Lavielle et al, J. Med. Chem., 1991) along with Taxanes such Taxol
(Kingston, J. Nat. Prod., 1990; Schiff et al, Nature, 1979; Swindell et
al, J. Cell Biol., 1981). Additionally, natural products such as
Rhizoxin (Nakada et al, Tetrahedron Left., 1993; Boger et al, J. Org.
Chem., 1992; Rao, et al, Tetrahedron Lett., 1992; Kobayashi et al, Pure
Appl. Chem., 1992; Kobayashi et al, Indian J. Chem., 1993; Rao et al,
Tetrahedron Lett., 1993), the Combretastatins (Lin et al, Biochemistry,
1989; Pettit et al, J. Nat. Prod., 1987; Pettit et al, J. Org. Chem.,
1985; Pettit et al, Can. J. Chem., 1982; Dorr et al, Invest. New Drugs,
1996), Curacin A (Gerwick et al, J. Org. Chem., 59:1243, 1994),
Podophyllotoxin (Hammonds et al, J. Med. Microbiol, 1996; Coretese et
al, J. Biol. Chem., 1977), Epothilones A and B (Nicolau et al., Nature,
1997), Dolastatin-10 (Pettit et al, J. Am. Chem. Soc., 1987; Pettit et
al, Anti-Cancer Drug Des., 1998), and Welwistatin (Zhang et al,
Molecular Pharmacology, 1996), as well as certain synthetic analogues
including Phenstatin (Pettit G R et al., J. Med. Chem., 1998),
2-styrylquinazolin-4(3H)-ones ("SQOs", Jiang et al, J. Med. Chem.,
1990), and highly oxygenated derivatives of cis- and trans-stilbene and
dihydrostilbene (Cushman et al, J. Med. Chem., 1991) are all known to
mediate their tumor cytotoxic activity through tubulin binding and
subsequent inhibition of mitosis."
[0101] As is also disclosed in published United
States patent application 2004/0044059, "Normally, during the metaphase
of cell mitosis, the nuclear membrane has broken down and tubulin is
able to form centrosomes (also called microtubule organizing centers)
which facilitate the formation of a microtubule spindle apparatus to
which the dividing chromosomes become attached. Subsequent
polymerization and depolymerization of the spindle apparatus mitigates
the separation of the daughter chromosomes during anaphase such that
each daughter cell contains a full complement of chromosomes. As
antiproliferatives or antimitotic agents, Tubulin Binding Agents
exploit the relatively rapid mitosis that occurs in proliferating tumor
cells. By binding to tubulin and inhibiting the formation of the
spindle apparatus in a tumor cell, the Tubulin Binding Agent can cause
significant tumor cell cytotoxicity with relatively minor effects on
the slowly-dividing normal cells of the patient."
[0102] An article by Mary Ann Jordan et al.,
entitled "Microtubules as a target for anticancer drugs," appeared in
Nature Reviews/Cancer, Volume 4, April 2004, pages 253-266. At page 253
of this article, it was disclosed that: "Microtubles are extremely
important in the process of mitosis . . . . Their importance in mitosis
and cell divison makes microtubles an important target for anticancer
drugs. Microtubules and their dynamics are the targets of a chemically
diverse group of antimitotic drugs (with various tubulin-binding sites)
that have been used with great success in the treatment of cancer . . .
. In view of the success of this class of drugs, it has been argued
that microtubules represent the best cancer target to be identified so
far . . . ."
[0103] The polymerization dynamics of microtubules
are discussed at pages 254 et seq. of the Jordan paper, wherein it is
disclosed that: "The polymerization if microtubules occurs by a
nucleation-elongation mechanism in which the relatively slow formation
of a short microtubule `nucleus` is followed by rapid elongation of the
microtubule at its ends by the reversible, non-covalent addition of
tubulin dimers . . . . It is important to emphasize that microtubues
are not simple equilibrium polymers. The show complex polymerization
dynamics that use energy provided by the hydrolysis of GTP at the time
that tubulin with bound GTP adds to the microtubule ends; these
dynamics are crucial to their cellular functions."
[0104] The Jordan et al. article also disloses
that: " . . . the correct movements of the chromosomes and their proper
segregation to daughter cells require extremely rapid dynamics, making
mitosis exquisitely sensitive to microtubule-targeted drugs."
[0105] The Jordan et al. article also disloses
that: "The biological functions of microtubules in all cells are
determined and regulated in large part by their polymerization dynamics
. . . . Microtubules show two kinds of non-equilibrium dynamics, both
with purified microtubule systes in vitro and in cells."
[0106] The Jordan et al. article also discloses (at
page 257, "Box 1") how one may measure microtubule dynamic instability.
It states that:"With purified microtubules in vitro (generally purified
from pig, cow, or sheep brains, which are a rich source of
microtubules), dynamic instability of individual microtubules is
measured by computer-enhanced time-lapse differential interference
contrast microscopy. In living cells, individual fluorescent
microtubules can be readily visualized in the thin peripheral regions
of the cells after microinjection of fluorescent tubulin or by
expressnion of GFP (green fluorescent protein) labeled tubulin. The
growing and shortening dynamics of the microtubules, which are
prominent in this region of interphase cells, are recorded by
time-lapse using a sensitive CCD (charge-coupled device) camera. To
determine how microtubule length changes with time, both in vitro and
in living cells, the ends of the individual growing and shortening
microtubules are traced by a cursor on succeeding time-lapse frames,
recorded, and their rates, lengths, and durations of growing and
shortening are calculated from the sequence of record x-=y positons of
the microtubule ends."
[0107] The "dynamic instability" phenomenon is
discussed at page 254 of the Jordan et al. article, wherein it is
disclosed that: "One kind of dynamic behavior that is highly prominent
in cells, called `dynamic instability,` is a process in which the
individual microtubule ends switch between phases of growth and
shortening . . . . The two ends of a microtubule are not equivalent:
one end, called the plus end, grows and shortens more rapidly and more
extensivelythan the other (the minus end) . . . . The microtubules
undergo relatively long periods of slow lengthening, brief periods of
rapid shortening, and periods of attenuated dynamics or pause, when the
microtubules neither gorw nor shorten detectably . . . . Dynamic
instability is characterized by four main variables: the rate of
microtubule growth; the rate of shortening; the frequency of transition
from the growth or paused state to shortening (this transitionis called
a `catastrophe`); and the frequency of transition from shortening to
growth or pause (called a `rescue`). Periods of pause are defined
operationally, when any changes in microtubule length that might be
occurring are below the resolution of the light microscope. The
variable called `dynamicity` is highly useful to describve the overall
visually detectable rate of exchange of tubulin dimmers with
microtubule ends."
[0108] The Jordan et al. article also discloses
that: "The second dynamic behavior, called `treadmilling` . . . is net
growth at one microtubule end and balanced net shortening at the
opposite end . . . . It involves the intrinsic flow of tubulin subunits
from the plus end of the microtubule to the minus end and is created by
differences in the critical subunit concentrations at the opposite
microtubule ends. (The critical subunit concentrations are the
concentrations of the free tubulin subunits in equilibrium with the
microtubule ends.). This behavior occurs in cells as well as in vitro
and might be particularly important in mitosis . . . . Treadmilling and
dynamic instability are compatible behaviours, and a specific
microtubule population can show primary treadmilling behavior, dynamic
instability behaviour, or some mixture of both. The mechanisms that
control one or the other behavior are poorly understood but probably
involve the tubulin isotype compositon of the microtubule poplulation,
the degree of post-transaltional modification of tubulin, and,
especially, the actions of regulatory proteins." Applicants believe
that, by causing the combination of one or more particular tubulin
isotypes with a candidate therapeutic agent, one may affect the
treadmiling behaviour and/or the dynamic instability behaviour of the
microtubules which comrprise the tubulin isotype." In particular, they
believe that the magnetic anti-mitotic compound of their invention
affects the treadmilling behavior and/or the dynamic instability
behavior of microtubules.
[0109] As is disclosed on page 263 of the Jordan et
al. article, a comprehensive review of tubulin isotypes and
post-translational modifications is presented in an article by R. F.
Luduena, "Multiple forms of tubulin: different gene productrs and
covalent modifications," Int. Rev. Cytology, 170: 207-275 (1998). The
Jordan et al. article also refers to a work by P. Verdier-Pinard et
al., "Direct analysis of tubulin expression in cancer cell lines by
electrospray ionization mass spectrometery," Biochemistry, 42:
12019-12027 (2003). According to the Jordan et al. article, "The
Verider-Pinard et al. article describes analyses of tubulin isotypes,
muations, and post-translational modifications by liquid
chromatography/electrospray-ionization mass spectrometery in
paclitaxel-sensivite and resistant cell lines."
[0110] Referring again to the Jordan et al.
article, it is disclosed that: "Dynamic instability and treadmilling
behaviours can both be observed with purified microtubules in vitro.
However, the rate and extent of both treadmilling and dynamc
instability are relatively slow with purified microtubules compared
with rates in cells. It is clear that microtubule dynamics in cells are
regulated by a host of mechanisms: cells can alter their expression
levels of 13 tubulin isotypes; they can alter their levels of tubulin
post-translational modifications; they can express mutated tubulin; and
they can alter the expression and phosphorylation levels of
microtubule-regulatory proteins . . . that interact with the
microtubule surfaceds and ends. Although microtubule dynamics can be
modulated by the interaction of regulatory molecules with soluble
tubulin itself, the assembled microtubule is likely to the the primary
target of cellular molecules that regulate microtubule dynamics. The
many drugs that modulate microtubule dynamics might be mimicking the
actions of the numerous natural regulators that control microtubule
dynamics in cells." Applicants believe that the magnetic anti-mitotic
compound of their invention is as effective as is paclitaxel in " . . .
mimicking the actions of the numerous natural regulators that control
microtubule dynamics in cells . . . ."
[0111] At page 255 of the Jordan et al. article,
the authors disclose that "Microtubule dynamics are crucial to mitosis
. . . . With the development of sophisticated methods for observing
microtubule dynamics in living cells, it is now possible to visualize
the dynamics of mitotic spindle microtubules. With these advances it
has become clear that microtubles in mitotic spindles have uniquely
rapid dynamics that are crucial to successful mitosis . . . . During
interphase, microtubules turn over (eschange their tubulin with the
soluble tubulin pool) relatively slowly, with half-times that range
from several minutes to several hours . . . . The interphase
microtubule network disassembles at the onset of mitosis and is
replaced by a new population of spindle microtubules that are 4-100
times more dynamic than the microtubules in the interphase
cytoskeleton. Although there is variation among the various
spindle-microtubule subpopulations, mitotic-spindle microtubules
exchange their tubulin with tubulin in the soluble pool rapidly with
half-times on the order of 10-30 seconds . . . . At least in some
cells, the increase in dynamics seems to result from an increase in the
catastrophe frequency, and a reduction in the rescue frequency rather
than from changes in the inherent rate of growth and shortening."
[0112] At page 256 of the Jordan et al. article, a
"Table 1" is presented regarding "Antimitotic drugs, their diverse
binding sites on tubulin and their stages of clinical development." As
is disclosed in such Table 1, one of the well-known binding domains on
tubulin is the "vinca domain."
[0113] One drug that binds at the vinca domain is
Vinblastine (Velban), which is used to treat Hodgkins disease and
testicular germ cell cancer. Reference may be had, e.g., to articles by
G. C. Na et al. ("Thermodynamic linkage between tubulin
self-association and the binding of vinblastine," Biochemistry, 19:
1347-1354, 1980; and "Stoichiometry of the vinblastine self-induced
self-association of calf-brain tubulin," Biochem. Soc. Trans., 8:
1347-1354, 1980), by S. Lobert et al. (in Methods in Enzymology, Vol.
323, [ed. Johnson M.] 77-103 [Academic Press 2000]), and by A.Duflos et
al. ("Novel aspects of natural and modified vinca alkaloids," Curr.
Med. Chem. Anti-Canc. Agents, 2: 55-70, 2002).
[0114] Another drug that binds at the vinca domain
is Vincristine (Oncovin); it is used to treat leukemia and lymphomas.
Reference may be had, e.g., to works by G. L. Plosker et al.
("Rituximab: a review of its use in non-Hodgkins lymphoma and chronic
leukemia," Drugs, 63: 803-843, 2003), by A. B. Sandler ("Chemotherapy
for small cell lung cancer," Semin. Oncol., 30: 9-25, 2003), and by J.
O. Armitage et al. ("Overview of rational and individualized
therapeutic strategies for non-Hodgkin's lymphoma," Clin. Lymphoma, 3:
S5-S11, 2002).
[0115] Another drug that binds at the vinca domain
is Vinorelbine (Navelbine), which is used to treat sold tumors,
lymphomas and lung cancer. Reference may be had, e.g., to works by J.
Jassem et al. ("Oral vinorelbine in combination with cisplatin, a novel
active regimen in advanced non-small-cell lung cancer," Ann. Oncol. 14:
1634-1639, 2003), by A. Rossi et al. ("Single agent vinorelbine as
first-line chemotherapy in elderly patients with advanced breast
cancer," Anticancer Res., 23: 1657-1664, 2003), and by A. D. Seidman
("Monotherapy options in the management of metastatic breast cancer,"
Semin. Oncol., 30: 6-10, 2003).
[0116] Another drug that binds at the vinca domain
is Vinflnine, which is used to treat bladder cancer, non-small-cell
lung cancer, and breast cancer. Reference may be had to, e.g., the
aforementioned article by A. Duflos et al., and to an article by T.
Okouneva et al. on "The effects of vinflunine, vinorelbine, and
vinblastine on centromere dynamics," Cancer Ther., 2: 4.27-4.36, 2003.
[0117] Another drug that binds to the vinca domain
is cryptophycin 52, and it is used to treat solid tumors. Reference may
be had, e.g., to articles by D. Panda et al. ("Interaction of the
antitumor compound cryptophycin 52 with tubulin," Biochemistry, 39:
14121-14127, 2000), and by K. Kerksiek et al. ("Interaction of
cryptophycin with tubulin and microtubules," FEBS Lett., 377: 59-61,
1995).
[0118] A class of drugs that binds to the vinca
domain of tubulin is the halichondrins (such as, e.g., E7389).
Reference may be had, e.g., to articles by M. A. Jordan ("Mechanism of
action of antitumor drugs that interact with microtubules and tubulin,"
Curr. Med. Chem Anti-Cancer. Agents, 2: 1-17, 2002), by R. B. Bai et
al. ("Halichondrin B and homohalichondrin B, marine natural products
binding in the Vinca domain of tubulin. Discovery of tubulin-based
mechanism of action by analysis of differential cytotoxity data," J.
Biol. Chem., 266: 15882-15889, 1991), by R. F. Luduena et al.
("Interaction of halichondrin B and homohalichondrin B with bovine
brain tubulin," Biochem. Pharmcol., 45: 4.21-4:27, 1993), and by M. J.
Towle et al. (in in vitro and in vivo anticancer activities of
synthetic macrocyclic ketone analogs of halichondrin B, Cancer Res.,
61: 1013-1021, 2001).
[0119] Another class of drugs that bind to the
vinca domain are the dolastatins (such as TZT-1027), which are used as
a vascular targeting agent. Reference may be had, e.g., to an article
by E. Harnel, "Natural products which interact with tubulin in the
Vinca domain: maytarsine, rhizoxin, phomopsin A. Dolostatins 10 and 15
and halichondrin B.," Pharmacol. Ther., 55:31-51, 1992.
[0120] Another class of drugs that bind to the
vinca domain is the hemiasterlins (such as HTI-286). Reference may be
had, e.g., to articles by R. Bai et al. ("Interactions of the
sponge-derived antimitotic antipeptide hemiasterin with tubulin:
comparison with dolastatin 10 and cryptophycin 1," Biochemistry, 38:
14302-14310, 1999), and by F. Loganzo et al. ("HTI-286, a synthetic
analogue of the tripeptide hemiasterin, is a potent antimicrotubule
agent that circumvents P-glycoprotein-mediated resistance in vitro and
in vivo," Cancer Res., 63: 1838-1845, 2003).
[0121] Another of the binding sites mentioned in
the 2004 Jordan et al. article (see Table 1) is the colchicine domain.
One of the drugs that binds in the colchicine domain is colchicine, and
it is used to treat non-neoplastic diseases such as gout and familial
Mediterranean fever. Reference may be had, e.g., to articles by S. B.
Hastie ("Interactions of colchicines with tubulin," Pharmacol. Ther.,
512: 377-401, 1991), and by D. Skoufias et al., "Mechanism of
inhibition of microtubule polymerization by colchicines inhibitory
potencies of unliganded cochicine and tubulin-colchicine complexes,"
Biochemistry, 31: 738-746, 1992.
[0122] The combretastatins (AVE8062A, CA-1-P,
CA-4-P, N-acetylcolchicinol-O-phosphate, ZD6126) are another class of
drugs that bind at the colchicines binding site. Reference may be had
to articles by G. M. Tozer et al. ("The biology of the combretastatins
as tumor vascular targeting agent," Int. J. Exp. Pathol., 83: 21-38,
2002), and by E. Harnel et al. ("Antitumor 2,3-dihydro-2-(aryl)-4(1H)
quinazolinone derivatives: interactions with tubulin," Biochem.
Pharmacol., 51: 53-59, 1996).
[0123] Another class of drugs that bind to the
colchicines domain is the methoxybenzene-sulphonamides (such as
ABT-751, E7010, etc.) that are used to treat solid tumors. Reference
may be had, e.g., to an article by K. Yoshimatsu et al., "Mechanism of
action of E7010, an orally active sulfonamide antitumor agent:
inhibition of mitosis by binding to the colchicines site of tubulin,"
Cancer Res., 57: 3208-3213, 1997).
[0124] As is also disclosed in Table 1 of the 2004
M. A. Jordan et al. article, the taxane site is another well known
tubulin binding site. Taxanes (such as paclitaxel) bind at this site
and are used to treat ovarian cancer, breast cancer, lung cancer,
Kaposi's sarcoma, and many other tumors. Reference may be had, e.g., to
articles by S. B. Horwitz ("How to make taxol from scratch," Nature,
367: 593-594, 1994), by J. Manfredi et al.("Taxol binds to cell
microtubules," J. Cell. Biol., 94: 688-696, 1982), by J. Parness et al.
("Taxol binds to polymerized tublulin in vitro," J. Cell. Biol., 91:
479-487, 1981), and by J. F. Diaz et al. ("Assembly of purified
GDP-tubulin into microtubules induced by taxol and taxotere:
reversibility, ligand stoichiochemistry, and competition,"
Biochemistry, 32: 2747-2755, 1993.).
[0125] Docetaxel (Taxotere) is another drug that
binds to the taxane site; and it is used to treat prostrate, brain, and
lung tumors. Reference may be had, e.g., to articles by C. P. Belani et
al.("TAX 326 Study Group: First-line chemotherapy for NSCLC: an
overview of relevant trials," Lung Cancer, 38 (Suppl. 4): 13-19, 2002),
and by F. V. Fosella et al. ("Second line chemotherapy for NSCLC:
establishing a gold standard," Lung Cancer, 38, 5-12, 2002).
[0126] The epothilones (such as BMS-247550,
epothilones B and D) are other drugs that bind to the taxane site; they
are used to treat paclitaxel-resistant tumors. References may be had,
e.g., to articles by D. M. Bolag et al. ("Epothilones: a new class of
microtubule-stabilizing agents with a taxol-like mechanism of action,"
Cancer Res., 55: 2325-2333, 1995), by M. Wartmann et al. ("The biology
and medicinal chemistiry of epothilones," Curr. Med. Chem. Anti-Cancer
Agents, 2: 123-148, 2002), by F. Y. Lee et al.("BMS-247550: a novel
epothilone analog with a mode of action similar to apcitaxel but
possessing superior antitumour efficacy," Clin. Cancer Res., 7:
1429-1437, 2001), and by K. Kamath et al. ("Suppression of microtubule
dynamics by epothilone B in living MCF7 cells," Cancer Res., 63:
6026-6031, 2003).
[0127] There are other microtubule binding sites
disclosed in Table 1 of the 2004 Jordan et al. publication. Thus, e.g.,
it is disclosed that estramustine is used to treat prostrate cancer.
Reference may be had, e.g., to articles by D. Panda et al.
("Stabilizatio of microtubule dynamics by estramustine by binding to a
novel site in tubulin: a possible mechanistic basis forits antitumor
action," Proc. Nat. Acad. Sci USA94: 10560-10564,1997), by O. Smaletz
et al. ("Pilot study of epothilone B analog [BMS-247550] and
estramustine phosphate in patients with progressive metastatic
prostrate cancer following castration," Ann. Oncol., 14: 1518-1524), by
W. Kelly et al. ("Dose escalation study of intraveneous extramstine
phosphate in combination with Paclitaxel and Carboplatin in patients
with advanced prostate cancer," Clin. Cancer Res. 9: 2098-2107, 2003),
by G. Hudes et al. ("Phase 1 clinical and pharmacologic trial of
intraveneous estramustine phosphate," J. Clin. Oncol., 20: 1115-1127,
2002), and by B. Dahllof et al. ("Estramustine depolymerizes
microtubules by binding to tubulin," Cancer Res. 53, 4573-4581, 1993).
[0128] Referring again to the Jordan et al.
article, and at page 256 thereof, the criticality of "highly dynamic
microtubules" is discussed. It is disclosed that: "Mitosis in most
cells progresses rapidly and the highly dynamic microtubules in the
spindle are required for all stages of mitosis. First, for the timely
and correct attachment of chromosomes at their kinetochoares to the
spindle during prometaphase after nuclear-envelope breakdown . . . .
Second, for the complex movements of the chromosomes that bring them to
their properly aligned positons at the metaphase plate . . . . Last,
for the synchronous separation of the chromosomes in anaphase and
telophase after the metaphase . . . . During prometaphase, microtubules
emanating from each of the two spindle poles make vast growing and
shortening excursions, essentially probing the cytoplasm until they
`find` and become attached to chromosomes at their kinetocores . . . .
Such microtubules must be able to grow for long distances . . . then
shorten almost completely, then re-grow again, until they successfully
become attached. The presence of a single chromosome that is unable to
achieve a bipolar attachment to the spindle is sufficient to prevent a
cell from transitioning to anaphase; the cell then remains blocked in a
prometaphase/metaphase like state and eventually undergoes apoptosis
(programmed cell death) . . . . We have found that suppression of
microtubule dynamics by drugs such as paclitaxel (Taxol) and Vinca
alkaloids seems to be a common mechanism by which these drugs block
mitosis and kill tumour cells. Human osterosarcoma cells after
inclubation with . . . paclitaxel and . . . vinflunine are shown . . .
. Many chromosomes are stuck at the spindle poles, unable to congress
to the metaphase plate. At least one reason that cancer cells are
relatively sensitive to these drugus compared to normal cells is that
cancer cells divide more freuqenlty than normal cells and thereofore
frequently pass though a stage of vulnerability to mitotic poisons."
[0129] The anti-mitotic drugs may also interfere
with "oscillations." As is disclosed at page 257 of the Jordan et al.
article, "During metaphase in the absence of drugs . . . the duplicated
chromosomes, which are attached to the microtubules at their
kinetohores, oscillate back and forth under high tension in the spindle
equatorial region in concert with growth and shortening of the attached
microtubles . . . . Superimposed on these oscillations, tubulin is
continuously and rapidly added to microtubles at the kinetochores and
is lost at the poles in a balanced fashion(that is, the microtubules
treadmill) . . . . The oscillations are believed to be required for th
proper functioning of the spindle. The absence of tension on the
chromosomal kinetochores is also sufficient to block cell-cycle
progress from metaphase to anaphase . . . . In apanphase . . . ,
microtubules that are attached to chromosomes must undergo a carefully
regulated shortening at that same time that another propotion of
spindle microtubles (the interpolar microtubules) lengthens."
[0130] Anti-mitotic drugs interfere with these
"microtubule dynamics" in different ways. As is disclosed at page 257
of the Jordan et al. article, " . . . a large number of chemically
diverse substances bind to soluble tubulin and/or directly to tubulin
in the microtubules." In one embodiment, the magnetic anti-mitotic
drugs of this invention bind directly to soluble tubulin. In another
embodiment, the magnetic anti-mitotic drugs of this invention binid to
the polymerized tubulin in the microtubules.
[0131] As is also disclosed in the Jordan et al.
article, "Most of these compounds are antimitotic agents and inhibit
cell proliferation by actring on the polymerization dynamics of spindle
microtubles, the rapid dynamics of which are essential to proper
spindle function." In one embodiment, the magnetic anti-mitotic
compounds of this invention act on the polymerization dynamics of the
spindle microtubules.
[0132] As is also disclosed in the Jordan et al.
article, "The specific effects of individual microtubule-targeted drugs
on the microtubule polymer mass and on the stability and dynamics of
the microtubules are complex. Microtubule-targeted antimitoitic drugs
are usually classified into two main groups. One group, known as the
microtubule-destabilizing agents, inhibits microtubule polymerization
at high concentrations . . . ." In one embodiment, the magnetic
anti-mitotic compounds of this invention inihibit microtubule
polymerization at high concentrations.
[0133] As is also disclosed in the Jordan et al.
article, "The second main group is known as the microtubule stabilizing
agents. These agents stimulate microtubule polymerization and include
paclitaxel . . . docetaxel . . . the epothilones, discodermolide . . .
and certain steroids . . . ." In one embodiment, the magnetic
anti-mitotic compounds of this invention stimulate microtubule
polymerization.
[0134] As is also disclosed in the Jordan et al.
article, "The classification of drugs as microtubule `staiblizers` or
`destabilizers` is overly simplistic . . . . The reason . . . is that
drugs that increase or decrease microtubule polymerization at high
concentrations powerfully suppress microtubule dynamics at 10-100 fold
lower concentrations and, therefore, kinetically stabilize the
microtubules, without changing the microtubule-polymer mass. In other
words, the effects of the drugs on dynamics are often more powerful
than their effects on polymer mass. It was previously thought that the
effects of the two classes of drugs on microtubule-polymer mass were
the most important actions resonsbile for their chemotherapeutic
properties. However, the drugs would have to be given and maintained at
very high dosage levels to act primarily and continuously on
microtubule-polymer mass. It now seems that the most important action
of these drugs is the suppression of spindle-microtubule dynamics,
which results in the slowing or blocking of mitosis at the
metaphase-anaphase transition and induction of apoptioic cell death."
In one embodiment, the magnetic properties of applicants' anti-mitotic
compounds result in the slowing or blocking of mitosis at the
metaphase-anaphase transition.
[0135] As is also disclosed in the Jordan et al.
article, "The microtubule-targeted drugs affect microtubule dynamics in
several different ways. To suppress microtubule dynamics for a
significant time, the drugs must bind to and act directly on the
microtubule. For example, a drug that suppresses the shortening rate at
microtubule ends must bind directly to the microtubule, either at its
end or along its length . . . many drugs also act on soluble tubulin,
and the relatively ability of a given drug to bind to soluble tubulin
or directly to the microtubule, and the location of the specific
binding site in tubulin and the microtubule, greatly affect the
response of the microtubule system to the drug."
[0136] At page 258 of the Jordan et al. article,
the mechanism by which Vinca alkaloids kills cancer cells is discussed.
It is stated that: "Tubulin and microtubules are the main targets of
the Vinca alkaloids . . . , which depolymerize microtubles and destroy
mitotic spindles at high concentrations . . . , therefore leaving the
dividing cancer cells blocked in mitosis with condensed chromosomes. At
low but clinically relevant concentrations, vinbalstine does not
depolymerize spindle microtubules, yet it powerfully blocks mitosis . .
. and cells die by apoposis. Studies form our laboratory . . . indicate
that the block is due to suppression of microtubule dynamics rther than
microtubule depolymerization . . . . Vinblastine binds to the
beta-submit of tublin dimmers at a distict region called the
Vinca-binding domain. Various other novel chemotherapeutic drugs also
bind at this domain . . . . The binding of vinblastine to sulbue
tubulin is rapid ad reversible . . . . Importantly, binding of
vinblastine induces a conformational change in tubulin in connection
with tubulin self-association . . . . The ability of vinlastine to
increase the affinity of tubulin for itself probably has a key role in
the ability of the drug to stabilize microtubules kinetically."
[0137] The degree to which vinblastine binds to
tubulin depends upon whether the tubulin is "exposed" or "buried." As
is also disclosed in the Jordan et al. article, "Vinblastine also binds
directly to microtubules. In vitro, vinblastine binds to tubulin at the
extreme microtubule ends . . . with very high affinity, but it binds
with markedly reduced affinity to tubulin that is brued in the tubulin
lattice . . . . Remarkably, the binding of one or two molecules of
vinblastine per microtubule plus end is sufficient to reduce both
treadmilling and dynamic instability by about 50 percent without
causing appreciable microtubule depolymerization."
[0138] By comparison, the taxanes bind poorly to
soluble tubulin. As is also disclosed in the Jordan et al. article,
"The taxanes bind poorly to soluble tubulin itself, but instead bind
directly with high affinity to tubulin along the length of the
microtubule . . . . The biding site for paclitaxel is in the
beta-subunit, and its location, which is on the inside surface of the
microtubule, is known with precision . . . . Paclitaxel is thought to
gain access to its binding sites by diffusing through small openings in
the microtubules or fluctuations in the microtubule lattice. Binding of
paclitaxel to its site on the inside microtubule surface stalbilizes
the microtubule and increases microtubule polymerization, presumably by
inducing a conformational change in the tubulin that, by an unkown
mechanism, increases its affinity for neighboring tubulin molecules."
In one preferred embodiment of this invention, a preferred magnetic
anti-mitotic compound of the invention binds well to soluble tubulin.
[0139] Even relatlively small amounts of paclitaxel
will stabilize the microtubules. As is disclosed in the Jordan et al.
article, "There is one paclitaxel binding site on very molecule of
tublin in a microtubule and the ability of paclitaxel to increase
microtubule polymerization is associated with nearly 1:1 stoichiometric
bind of paclitaxel to tubulin in microtubules So if a typical
microtubule consists of approximately 10,000 tubulin molecules, then
the ability of paclitaxel to increase microtubule polymerization
requires the binding of about 5,000 packlitaxel molecules per
microtubule. However, in contrast with the large number of molecules
that are required to increase microtubule polymerization, we found that
binding of a very small number of molecules stabilizes the dynamics of
the microtubules without increasing microtubule polymerization."
Support for this statement in the article was a work by W. B. Derry et
al., "Substoichiometric binding of taxol suppresses microtubule
dynamics," Biochemistry, 34: 2203-2211, 1995.
[0140] As is also disclosed in the Jordan et al.
article, " . . . just one paclitaxel molecule bound per several hundred
tubulin molecules in a microtubule can reduce the rate of microtubule
shortening by about 50 percent. Suppression of microtubule dynamics by
paclitaxel leads to mitotic block in the absence of significant
microtubule bundling." Basis for this statement was an article by A. M.
Yvon et al., "Taxol suppresses dynamics of individual microtubules in
living human tumor cells," Mol. Biol. Cell, 10:947-949, 1999. This Yvon
et al. artricle was the "first demonstration that suppression of
microtubule dynamics in living cells by low concentrations of
paclitaxel correlates with mitotic block."
[0141] As is also disclosed in the Jordan et al.
article, " . . . the suppression of spindle-microtubule dynamics
prevents the dividing cancer cells from progressing from metaphase into
anaphase and the cells eventually die by apoptosis." As basis for this
statement, articles were cited by M. A. Jordan et al. ("Mitotic block
induced in HeLa cells by low concentrations of paclitaxel [Taxol]
results in abnormal mitotic exit and apoptotic cell death," Cancer
Res., 56: 816-825, 1996), by Yvon et al. ("Taxol suppresses dynamics of
individual microtubules in living human tumor cells, Mol. Biol. Cell,
10: 947-949, 1999), and by J. Kelling et al. ("Suppression of
centromere dynamics by taxol in Iving osteosarcoma cells," Cancer Res.,
63: 2794-2801, 2003).
[0142] The Jordan et al. article also discusses the
mechanism by which colchicines exerts its anti-mitotic effects. At
pages 260 et seq., it discloses that: "The interaction of colchicines
with tubulin and microtubules presents yet another variation in the
mechanisms by which microtubule-active drugs inhibit microtubule
function. As with the Vinca alkaloids, colchicines depolymerizes
microtubles at high concentrations and stabilizes microtubule dynamics
at low concentrations. Colchicine inhibits microtubule polymerization
substoichiometrically (at concentrations well below the concentration
of tubulin that is free in solution . . . ." In support of this
statement, the Jordan et al. article cites an article by L. Wilson et
al. (in Microtubules [eds. J. S. Hymans et al.], 59-84 [Wiley-Liss, New
York, N.Y., 1994]).
[0143] As is also disclosed in the Jordan et al.
article, " . . . colchicine itself does not bind directly to
microtubule ends. Instead, it first binds to soluble tubulin, induces
slow conformational changes in the tubulin and ultimately forms a
poorly reversible final state tubulin-colchicine complex . . . which
then copolymerizes into the microtubule ends in small numbers along
with large numbers of free tubulin molecules."
[0144] The Jordan et al. article discloses that the
tubulin-colchicine complexes must bind more tightly to tublin that
tubulin itself does, stating that: "Tubulin colchicines complexes might
have a conformation that disrupts the microtubule lattice in a way that
slows, but does not prevent, new tubulin addition. Importantly, the
incorporated tubulin-colchicine complex must bind more tightly to its
tubulin neighbors than tubulin itself does, so that the normal rate of
tubulin dissociation is reduced."
[0145] As is also disclosed in the Jordan et al.
article, "So, despite the differences between the effects at high
concentrations of the Vinca/colchicines-like drugs and the taxane-like
drugs, nearly all of the microtubule-targeted antimitotic drugs
stabilize microtubule dynamics at their lowest effective
concentrations. Stabilization of microtubule dynamics correlates with
blocking of the cell cycle at mitosis and in senstivie tumour cells,
ultimately resulting in cell death by apoptosis. Therefore, the most
potent mechanism of nearly all of the microtubule -targeted drugs seems
to be the stabilization of dynamics of mitotic spindle microtubles."
[0146] In one preferred embodiment of this
invention, the antimitotic compounds of this invention inhibit the
process of angiogenesis (the formation of new blood vessels). In
another embodiment of this invention, the antimitotic compounds of this
invention shut down the existing vasulature of tumors.
[0147] Prior art compositions that have these
antivascular effects have been reported. Thus, as is disclosed at page
260 of the 2004 Jordan et al. article, ""The tumour vasculature is a
relatively attractive new target for cancer therapy. The vasculature is
easily accessible to blood-borne therapeutic agents, and tumour cells
generally die rapidly unless they are supplied with oxygen and
nutrients through the blood. There are two types of approaches to
inhibiting vascular function. One . . . is the search for agents that
inhibit the process of angiogenesis-the formation new blood vessels.
However, more recently, the ability of several compounds, especially
microtubule-targeted agents, to rapidly shout down existing turmour
vasculature has been recognized . . . ." In support of this last
statement, the Jordan et al. article cited an article by G. M. Tozer et
al. on "The biologcy of the combretastatins as tumouor vascular
targeting agents," Int. J. Exp. Pathol., 83: 21-38 (2002).
[0148] As is also disclosed in the 2004 Jordan et
al. article, "Since the late 1990s, the combestatins and
N-acetylcolchicinol-O-phosphate, compounds that resemble colchicines
and bind to the colchicines domain on tubulin, have undergone extensive
development as antivascular agents . . . . When vascular targeting
agents . . . are added to cultures of endothelial cells . . . , the
microtubules rapidly depolymerize, the cells become round within
minutes, undergo blebbing and detaching from the substrate, actin
stress fibres form (presumably as a result of signaling from the
depolymerizing microtubule cytoskeleton), and the cells die with no
evidence of apoptosis." As support for this latter statement, the 2004
Jordan et al. article cited a work by C. Kanthou et al., "The tumor
vascular targeting agent combretastatin A-4 phosphate induces
reorganization of the actin cytoskeleton and early membrane blebbing in
human endothelial cells," Blood, 99:2060-2069 (2002).
[0149] As is also disclosed in the 2004 Jordan et
al. article, "The process of vascular shutdown can be observed in rats
through windowed chambers that are implanted subcutaneously. This
indicates that a primary and marked effect of vascular-targeting agents
is an extremely rapid reduction of blood flow to the interior of solid
tumours, often within 5 minutes of administering the drug to the
aminal. Within 1 hour, the red-cell velocity might drop to less than 5
percent of the starting value." As support for this statement, the 2004
Jordan et al. article cited a work by G. M. Tozer et al. on "Mechanisms
associated with tumor vascular shut-down induced by combretastatin A-4
phosphate: intravital miscroscopy and measurement of vascular
permeability," Cancer Res., 61: 6413-6422 (2001).
[0150] The anti-vascular agents cause small blood
vessels to disapper, blood flow to slow, red blood cells to aggregate
in stacks or "rouleaux," hemorrhaging from peripheral tumor vessels to
occur, vascular permeability to increase, and the death of interior
tumor cells by necrosis. See, e.g., an article by G. M. Tozer et al.,
"The Biology of the combretastatins as tumor vascular targeting
agents," Int. J. Exp. Pathol, 83: 21-38 (2002).
[0151] As is also disclosed in the 2004 Jordan et
al. article, " . . . the vascular-targeting aents that are now under
development seem to damage tumour vasculature without significantly
harming normal tissues . . . ." The Jordan et al. article, as support
for this statement, cites work by V. E. Prise et al., reported in "The
vascular response of tumor and normal tissues in the rat to the
vascular targeting agent combretastatin A4 phosphate, at clinically
relevant doses," Int. J. Oncol. 21: 717-726 (2002). In one embodiment,
the magnetic anti-mitotic compound of this invention damages tumors
without significantly harming normal tissues.
[0152] As is also disclosed in the 2004 Jordan et
al. article, "The source of this specificity is not known, but has been
suggested to be attributable to differences between the mature
vasculature of normal tissues and the immature or forming vasculature
of tumors. There are suggestions that endothelial cells of immature
vasculature could have a less well-developed actin cytoskeleton that
might make the cells more susceptible to collapse." The basis for this
statement was an article by P. D. Davis et al., "ZD6126: A novel
vascular-targeting agent that casues selective destruction of tumor
vasculature," Cancer Res. 62: 7247-7253 (2003).
[0153] As is also disclosed in the 2004 Jordan et
al. article, " . . . more sluggish or more variable blood flow in
tumour vasculature might make the tumour vessels particularly
susceptible to damaging agents. Differences in rates of
endothelial-cell proliferation, in post-translational modifications of
tubulin, and in interactions between actin and microtubules might also
contribute to the specificity of vasclualr targeting agents."
[0154] At page 261 of the 2004 Jordan et al.
article, tumor sensitivity and resistance are discussed. It is
disclosed that: "Among the most important unsolved questions about the
antitumour activities of microtubule-targeted drugs concerns the basis
of their tissue specificities and the basis for the development of drug
resistance to these agents. For example, it is not known why paclitaxel
is so effective against ovarian, mammary and lung tumours, but
essentially ineffective against many other solid tumours, such as
kidney or color carcinomas and various sarcomas. Similarly, for the
Vinca alkaloids, it is unclear why they are frequently most effective
against haematological cancers, but often ineffective against many
solid tumors. There are clearly many determinants of sensitivity and
resistance to antimitotic drugs, both at the level of the cells
themselves and at the level of the pharmacological accessibility of the
drugs to the tumour cells." As authority for these statements, the 2004
Jordan et al. article cited work by C. Dumontet et al., "Mechanisms of
action of and resistance to antitubulin agents: microtubule dynamics,
drug transport, and cell death," J. Clin. Oncol., 17: 1061-1070 (1999).
[0155] As is also disclosed in the 2004 Jordan et
al. article, "the "ultimate failure or inherent resistance to
chemotherapy with antimitotic drugs often results from overexpression
of a class of membrane transporter proteins known as
ABC-transporters(ATP-dependent drug efflux pumps or ATP-binding
cassettes). These membrane pumps produce decreased intracellular drug
levels and lead to cross-resistance (multidrug resistance) . . . to
drugs of different chemical structures, such as paclitaxel and Vinca
alkaloids. The first of many identified was P-glycoprotein, the product
of the human MDRI gene." As support for these statements, the 2004
Jordan et al. article cited work by S. V. Ambudkar et al.,
"P-glycoprotein: from genomics to mechanism," Oncogene, 22: 7468-7485
(2003).
[0156] In one preferred embodiment, the magnetic
anti-mitotic compound of this invention is not removed by these
membrane pumps. It should be noted that, as is reported by the 2004
Jordan et al. article, "Considerable efforts are underway to understand
these mechanisms of resitance, to develop P-glycoprotein inhibitors and
to develop microtubule-targeted drugs that are not removed by these
pumps. As authority for these statements, the 2004 Jordan et al.
article cited works by S. V. Ambdukar et al. (see the citation in the
preceding paragraph), by A. R. Safa ("Identification and
characterization of the binding sites of P-glycoprotein for
multidrug-resistance-related drugs and modulators," Curr. Med. chem.
Anti-Canc. Agents, 4: 1-17, 2004), by H. Thomas et al. ("Overcoming
multidrug resistance in ancer: an udate on the clinical strategy of
inhibiting P-glycoprotein," Cancer Control, 10: 159-165, 2003), and by
R. Geney et al. ("Overcoming multidrug resistance in taxane
chemotherapy," Clin. Chem. Lab. Med., 40: 918-925, 2002).
[0157] The 2004 Jordan et al. article discusses the
role of specific tubulin isotypes in multidrug resitance. At page 262
of the article, it is stated that: "However, in addition, cells also
have many microtubule-related mechanisms that confer resistance or
determine intrinsic insensivity to antimitotic drugs." As support for
these statements, the Jordan et al. article cites an article by G. A.
Orr et al. ("Mechanisms of taxol resistance related to microtubules,"
Oncogene, 22: 7280-7295, 2003) which is a comprehensive review of
microtubule-related mechanisms of paclitaxel resistance. The article
also cites works by M. Kavallaris et al.("Multiple microtubule
alterations are associated with Vinca alkaloid resistance in human
leukemia cells," Cancer Res, 61: 5803-5809, 2001), by A. M. Minotti et
al. ("Resistance to antimitotic drugs in Chinese hamster overay cells
correlated with changes int eh level of polymerized tubulin," J. Biol.
Chem., 266: 3987-3994, 1991), by S. W. James et al. (A mutation in the
. . . tubulin gene of Chlamydomonas reinhardtii confers resistance to
anti-microtubule herbicides," J. Cell Sci. 106: 209-218, 1993), by W.
P. Lee et al. ("Purification and characterization of tublin form
parental and vincristine-resistant HOB1 lymphoma cells," Arch. Biochem.
Biophys. 319: 498-503, 1995), by S. Ohta et al. ("Characterization of a
taxol-resistant human small-cell lung cancer cell line," Jpn. J. Cancer
Res., 85: 290-297, 1994), and by N. M. Laing et al. ("Amplification of
the ATP-binding cassette 2 transporter gene if unctionally linked with
enhanced efflux of estramustine in overian carcinoma cells," Cancer
Res., 58: 1332-1337, 1998.)
[0158] In one preferred embodiment of this
invention, the magnetic anti-mitotic compound of this invention binds
to, and inactivates, a tubulin isotype that causes, or tends to cause,
drug-resistance.
[0159] As is also disclosed in the 2004 Jordan et
al. article, "Microtubule polymer levels and dynamics are regulated by
a host of factors, including expression of regulatory proteins,
post-translational modifications of tubulin and extression of different
tubulin isotypes. The levels of each of these isotpypes differ among
tissue and cell types, and there are numerous examples of changes in
their levels that correlate with development of resistance of
paclitaxel or Vinca alkaloids and other microtubule-targeted drugs." In
support of these statements, the Jordan et al. article cited works by
C. M. Galmarini et al. ("Drug resistance associated with loss of p53
involves extensive alterations in microtubule composition and
dynamics," Br. J. Cancer, 88:1793-1799, 2003), by C. A. Burkart et al.
("The role of beta-tubulin isotpyes in resistance to antimitotic
drugs," Biochim. Biophys. Acta, 2: 01-09, 2001), by C. Dumontet et al.
("Resistance to microtubule-targeted cytotoxins in a K562 leukemia cell
variant is associated with altered tubulin expression," Elec. J.
Oncol., 2: 33-44, 1999), by P. Giannakakou et al. ("A common
pharmacophore for epothilone and taxanes: molecular basis for drug
resistance conferred by tubulin mutations in human cancer cells, Proc.
Natl. Acad. Sci USA, 97: 2904-2090, 2000), by A. Goncalves et al.
("Resistance to taxol in lung cancer cells associated with increased
microtubule dynamics," Proc. Natl. Acad. Sci USA, 98: 11737-11741,
2001), by M. Haber et al. ("Altered expression of M32, the class II
beta-tubulin isotype, in a murine J774.2 cell line with a high level of
taxol resistance," J. Biol. Chem., 270: 31269-31275, 1995), by J. P.
Jaffrezou et al. ("Novel mechanism of resistance to paclitaxel in human
K562 leukemia cells by combined selection with PSC833," Oncology Res.,
7: 512-517, 1995), and by M. Kavallaris et al. ("Taxol-resistant
epithelial ovarian tumors are associated with altered expression of
specific beta-tubulin isotypes),: J. Clin. Invest. 100: 1-12, 1997. In
one embodiment, the " . . . specific beta-tubulin isotypes" that are
preferentially expressed by malignant cells are preferentially bound to
(and inactivated) by the magnetic, anti-mitotic compound of this
invention, as is more fully discussed elsewhere in this specification.
[0160] As is also disclosed in the 2004 Jordan et
al. article, " . . . subtle suppression of microtubule dynamics by
paclitaxel, vinblastine or other antimitotic drugs, without any
attendant change in the microtubule-polymer mass, prevents progress
through the cell cycle from metaphase to anaphase in sensitive cells.
Changes in microtubule dynamics can lead to altered sensitivity to
microtubule-targeted drugs. In one well studied case of paclitaxel
resistance, resistant and paclitaxel-depedent A549 lung cancer cells
had inherently faster microtubule dynamics following withdrawal of
paclitaxel than sensitive cells . . . ." As support for this statement,
the article cited work by A. Goncalves et al., reported in "Resistance
to taxol in lung cancer cells associated with increased microtubule
dynamics," Proc. Natl. Acad. Sci. USA, 98: 11737-11747, 2001."
[0161] As is also disclosed in the 2004 Jordan et
al. article, "In the absence of paclitaxel, the
paclitaxel-resistant/dependent cells with the faster microtubule
dynamics were unable to progress from metaphase to anaphase and their
spindles became disorganized. So, these cells were resistant to
paclitaxel and also dependent on paclitaxel to slow their dynamics and
allow them to go through mitosis successfully. The inherent sensititivy
of cells to subtle changes in microtubule dynamics means that there are
numerous ways for cells to become resistant to microtubule-targeted
drugs. In the case of the paclitaxel-resistant A549 cells discussed
above, the mechanisms of increased dynamics seem to involve several
changes. The resistant cells overexpress one of the isotypes of
tubulin, BIII-tubulin." As support for this last statement, the 2004
Jordan et al. article cited works by M. Kavallaris et al. ("Antisense
oligonucleotides to class III beta-tubulin sensitive drug-resistant
cells to taxol," Br. J. Cancer, 80: 1020-1025, 1991), by L. A. Martello
et al. ("Taxol and discodermolide represent a synergistic drug
combination in human carcinoma cell lines," Clin. Cancer Res., 6:
1978-1987, 2000), and another article by Martello et al. ("Elevated
levels of microtubule-destabilizing factors in a taxol-resistant A549
cell line with a alpha-tubulin mutation," Cancer Res., 63: 1207-1213,
2003. In one embodiment of this invention, the anti-mitotic compound of
this invention is used to bind with, and inactivate, the beta-tubulin
isotype(s) expressed by the drug-resistant cancer cells.
[0162] As is also disclosed in the 2004 Jordan et
al. article. "In addition, they have a heterozygous point mutation in
alpha-tubulin and they overexpress the ative form of the
microtubule-destabilizing protein stahmin and the inactive form of the
putative microtubule stabiling protein MAP 4 . . . ."
[0163] As is also disclosed in the 2004 Jordan et
al. article, " . . . drug resistance might involve some of the ther
forms of tubulin . . . that associate with the centrosomes in intrphase
and with the spindle poles in mitotic cells." In one embodiment of this
invention, the anti-mitotic compound of this invention binds to, and
inactivates, one or more of these other forms of tubulin.
[0164] As is also disclosed in the 2004 Jordan et
al. article. "The fact that antimitotic drugs bind to many diverse
sites on tubulin and microtubles mean that clinical combinations of two
or more of these drugs have the potential to improve efficiency and
reduce the side effects of therapy." In one embodiment of this
invention, the actions of two or more separate chemotherapeutic agents
are combined into one compound or composition. In another embodiment,
the anti-mitotic compound of this invention is administered with
another chemotherapeutic agent, prior to the administration of another
chemotherapeutic agent, or after the administration of another
chemotherapeutic agent. This embodiment is discussed elsewhere in this
specification.
[0165] As is also disclosed in the 2004 Jordan et
al. article, "The discovery of the synergistm of paclitaxel with
discodermolide is particularly interesting, as both drugs bind to the
same or overlapping sites on tubulin or microtubules." In one
embodiment, the magnetic, anti-mitotic compound of this invention binds
to the same or averlapping sites on tubulin or microtubules as does
paclitaxel.
[0166] Many of the matters disclosed in the 2004
Jordan et al. article regarding tubulin isotype are also disclosed in
the patent literature.
[0167] By way of illustration, U.S. Pat. No.
5,888,818, the entire disclosure of which is hereby incorporated by
reference into this specification, claims "An isolated DNA encoding an
.alpha.- or .gamma.-tubulin, which tubulin is resistant to an
anti-tubulin agent selected from the group consisting of
dinitroanaline, phosphorothioamidate and chlorthal dimethyl, the
resistant tubulin comprising a non-polar amino acid instead of a
threonine residue at a position corresponding to that depicted as
position 239, 237, or 240 in Table 2." At columns 1 et seq. of such
patent, an excellent discussion of microtubules and tubulin isotypes is
presented.
[0168] Thus, as is disclosed in U.S. Pat. No.
5,888,818, "Almost all eukaryotic cells contain microtubules which
comprise a major component of the network of proteinaceous filaments
known as the cytoskeleton. Microtubules thereby participate in the
control of cell shape and intracellular transport. They are also the
principal constituent of mitotic and meiotic spindles, cilia and
flagella. In plants, microtubules have additional specialized roles in
cell division and cell expansion during development."
[0169] As is also disclosed in U.S. Pat. No.
5,888,818, "In terms of their composition, microtubules are
proteinaceous hollow rods with a diameter of approximately 24 nm and
highly variable length. They are assembled from heterodimer subunits of
an .alpha.-tubulin and a .beta.-tubulin polypeptide, each with a
molecular weight of approximately 50,000. Both polypeptides are highly
flexible globular proteins (approximately 445 amino acids), each with a
predicted 25% .alpha. helical and 40% .beta.-pleated sheet content. In
addition to the two major forms (.alpha.-and .beta.-tubulin), there is
a rare .gamma.-tubulin form which does not appear to participate
directly in the formation of microtubule structure, but rather it may
function in the initiation of microtubule structure."
[0170] As is also disclosed in U.S. Pat. No.
5,888,818, "In all organisms, the multiple .alpha.- and .beta.-tubulin
polypeptides are encoded by corresponding families of .alpha.- and
.beta.-tubulin genes, which are located in the nuclear genome. Many
such genes (or corresponding cDNAs) have been isolated and sequenced.
For example, maize has approximately 6 .alpha.-tubulin genes and
approximately 8 .beta.-tubulin genes dispersed over the genome
(Villemur et al, 1992, 34th Maize Genetics Symposium). Some of the
.alpha.-tubulin genes from maize have been cloned and sequenced
(Montoliu et al, 1989, Plant Mol Biol, 14, 1-15; Montoliu et al, 1990,
Gene, 94, 201-207; Villemur et al, 1992, J Mol Biol, 227:81-96), as
have some of the .beta.-tubulin genes (Hussey et al, 1990, Plant Mol
Biol, 15, 957-972). Comparison of amino acid sequences of the three
documented maize .alpha.-tubulins indicates they have 93% homology.
Maize .beta.-tubulins exhibit 38% identity with these .alpha.-tubulins.
In segments of divergence between the .alpha.- and .beta.-tubulin amino
acid sequences, homology ranges from 13% to 17%. Homology between the
three .alpha.-tubulin amino acid sequences within these same
.alpha.-/.beta.-divergence regions ranges from 77% to 96%."
[0171] As is also disclosed in U.S. Pat. No.
5,888,818, "Sequence information on the various tubulin forms shows
that throughout evolution the protein domains involved in
polymerization have been highly conserved, and interspecies amino acid
sequence homology is generally high. For example, the four
.beta.-tubulin isotypes in human are identical with their counterparts
in mouse. There is 82-90% homology between mammalian neuronal or
constitutively expressed tubulins and algal, protozoan and slime mould
tubulins. Considering plant sequences in more detail, there are long
stretches in which the amino acid sequence of all the .alpha.- and
.beta.-tubulins are identical (Silflow et al, 1987, Developmental
Genetics, 8, 435-460). For example, the 35 amino acids in positions
401-435 are identical in all plant .alpha.-tubulins, as are the 41
amino acids in the region between positions 240 and 281 in the plant
.beta.-tubulins. Conservation of amino acid residues is approximately
40% between the .alpha.- and .beta.-tubulin families, and 85-90% within
each of the .alpha.- and .beta.-tubulin families. It should be noted
that in general, most .alpha.-tubulins are 1 to 5 residues larger that
the .beta.-tubulins."
[0172] U.S. Pat. No. 5,888,818 then goes on to
discuss anti-tubulin agents, stating that: "The economic interest of
tubulins lies in the effect of certain agents which interfere with
tubulin structure and/or function. Such agents (including non-chemical
stresses) are hereinafter referred to as `anti-tubulin agents` as they
share a similar type of mode of action. Extreme conditions are known to
destabilize the tubulins and/or microtubules. Such conditions include
cold, pressure and certain chemicals. For example, Correia (1991,
Pharmac Ther, 52:127-147) describes .alpha.- and .beta.-tubulin
interactions, microtubule assembly and drugs affecting their stability.
Some anti-tubulin agents are often called `spindle poisons` or
`antimitotic agents` because they cause disassembly of microtubules
which constitute the mitotic spindle. For at least one hundred years,
it has been known that certain chemical agents arrest mammalian cells
in mitosis, and of these agents the best known is colchicine which was
shown in the mid-1960s to inhibit mitosis by binding to tubulin. Many
of these anti-tubulin agents have since found widespread use as cancer
therapeutic agents (eg vincristine, vinblastine, podophyllotoxin),
estrogenic drugs, anti-fungal agents (eg griseofulvin), antihelminthics
(eg the benzimidazoles) and herbicides (eg the dinitroanilines). Indeed
some of the specific agents have uses against more than one class of
organism. For example, the dinitroaniline herbicide trifluralin has
recently been shown to inhibit the proliferation and differentiation of
the parasitic protozoan Leishmania (Chan and Fong, 1990, Science,
249:924-926)." Thus, as is apparent from this teaching, the magnetic,
anti-mitotic drugs disclosed in this specification may be used not only
to treat cancer but also as " . . . estrogenic drugs, anti-fungal
agents . . . , antihelminthics . . . and herbicides . . . ."
[0173] As is also disclosed in U.S. Pat. No.
5,888,818, "The dinitroaniline herbicides may be considered as an
example of one group of anti-tubulin agents. Dinitroaniline herbicides
are widely used to control weeds in arable crops, primarily for grass
control in dicotyledonous crops such as cotton and soya. Such
herbicides include trifluralin, oryzalin, pendimethalin, ethalfluralin
and others. The herbicidally active members of the dinitroaniline
family exhibit a common mode of action on susceptible plants. For
example, dinitroaniline herbicides disrupt the mitotic spindle in the
meristems of susceptible plants, and thereby prevent shoot and root
elongation (Vaughn K C and Lehnen L P, 1991, Weed Sci, 39:450-457). The
molecular target for dinitroaniline herbicides is believed to be
tubulin proteins which are the principle constituents of microtubules
(Strachan and Hess, 1983, Pestic Biochem Physiology, 20, 141-150;
Morejohn et al, 1987, Planta, 172, 252-264)."
[0174] As is also disclosed in U.S. Pat. No.
5,888,818, "The extensive interest in anti-tubulin agents in many
branches of science has been accompanied by the identification of
several mutants shown to resist the action of such agents (Oakley B R,
1985, Can J Blochem Cell Biol, 63:479-488). Several of these mutants
have been shown to contain modified .alpha.- or .beta.-tubulin genes,
but to date the only resistant mutants to be fully characterised and
sequenced are those in .beta.-tubulin. For example, colchicine
resistance in mammalian cell lines is closely associated with modified
.beta.-tubulin polypeptides (Cabral et al, 1980, Cell, 20, 29-36);
resistance to benzimidazole fungicides has been attributed to a
modified .beta.-tubulin gene, for example in yeast (Thomas et al, 1985,
Genetics, 112, 715-734) and Aspergillus (Jung et al, 1992, Cell
Motility and the Cytoskeleton, 22:170-174); some benzimidazole
resistant forms of nematode are known; and dinitroaniline-resistant
Chlamydomonas mutants possess a modified .beta.-tubulin gene (Lee and
Huang, 1990, Plant Cell, 2, 1051-1057). Some of these mutants, although
resistant to one anti-tubulin agent, also show increased susceptibility
to other anti-tubulin agents (such as cold stress)." As is also
discussed elsewhere in this, and in one preferred embodiment, the
anti-mitotic compounds and/or compositions of this invention are
adapted to bind one or more of the tubulin isotypes expressed by such
mutants.
[0175] As is also disclosed in U.S. Pat. No.
5,888,818, "Among certain weed species, some biotypes have evolved
resistance to dinitroaniline herbicides. Three examples of species in
which dinitroaniline resistant (R) biotypes have emerged are
goosegrass, Eleusine indica (Mudge et al, 1984, Weed Sci, 32, 591-594);
green foxtail, Setaria viridis (Morrison et al, 1989, Weed Technol, 3,
554-551); and Amaranthus palmeri (Gossett et al, 1992, Weed Technology,
6:587-591). These resistant (R) biotypes emerged following selective
pressure exerted by repeated application of trifluralin. A range of
resistant biotypes of each species exists but the nature and source of
the resistance trait is unclear and the biotypes are genetically
undefined. The R biotypes of these species exhibit cross-resistance to
a wide range of dinitroaniline herbicides, including oryzalin,
pendimethalin and ethalfluralin. All dinitroaniline herbicides have a
similar mode of action and are therefore believed to share a common
target site. Many of the R biotypes are also cross-resistant to other
herbicide groups such as the phosphorothioamidates, which include
amiprophos-methyl and butamifos, or chlorthal-dimethyl. The phenomenon
of cross-resistance exhibited by resistant biotypes strongly indicates
that the herbicide resistance trait is a consequence of a modified
target site. In addition, the resistant biotypes appear to have no
competitive disadvantage as they grow vigorously and can withstand
various stresses (such as cold)." To the extent that the drug resistant
trait is " . . . a consequence of a modified target site . . . ," and
in one preferred embodiment, the magnetic anti-mitotoic compounds of
this invention are adapted to preferentially bind to such modified
target site.
[0176] As is also disclosed in U.S. Pat. No.
5,888,818, "It has not been previously shown which specific gene is
modified in Eleusine indica or Setaria viridis to confer the
dinitroaniline resistance trait. Research by K. C. Vaughn and M. A.
Vaughn (American Chemical Society Symposium Series, 1989, 364-375)
showed an apparent alteration in the electrophoretic properties of
.beta.-tubulin present in an R biotype of Eleusine indica, and
suggested dinitroaniline resistance results from the presence of a
modified .beta.-tubulin polypeptide. The results of recent work by
Waldin, Ellis and Hussey (1992, Planta, 188:258-264) provide no
evidence that dinitroaniline herbicide resistance is associated with an
electrophoretically modified .beta.-tubulin polypeptide in the
resistant biotypes of Eleusine indicaor Setaria viridis which were
studied." In one preferred embodiment of this invention, the magnetic
anti-mitotic agent of this invention is adapted to bind to a target
site on a beta-tubulin polypeptide.
[0177] U.S. Pat. No. 6,306,615, the entire
disclosure of which is hereby incorporated by reference into this
specification, claims a detection method for identifying modified
beta-tubulin isotypes. Thus, e.g., claim 17 of this patent discloses:
"17. A method of monitoring the amount of a tubulin modified at a
cysteine residue at amino acid position 239 in a patient treated with a
sulfhydryl or a disulfide tubulin modifying agent, the method
comprising the steps of: (a) providing a sample from the patient
treated with the tubulin modifying agent; (b) contacting the sample
with an antibody that specifically binds to the tubulin modified at a
cysteine residue at amino acid position 239; and (c) determining the
amount of the tubulin modified at a cysteine residue at amino acid
position 239 in the patient sample by detecting the antibody and
comparing the amount of antibody detected in the patient sample to a
standard curve, thereby monitoring the amount of the tubulin modified
at a cysteine residue at amino acid position 239 in the patient."
[0178] As is also disclosed in U.S. Pat. No.
6,306,615, "Microtubules are composed of .alpha./.beta.-tubulin
heterodimers and constitute a crucial component of the cell
cytoskeleton. Furthermore, microtubules play a pivotal role during cell
division, in particular when the replicated chromosomes are separated
during mitosis. Interference with the ability to form microtubules from
.alpha./.beta.-tubulin heterodimeric subunits generally leads to cell
cycle arrest. This event can, in certain cases, induce programmed cell
death. Thus, natural products and organic compounds that interfere with
microtubule formation have been used successfully as chemotherapeutic
agents in the treatment of various human cancers."
[0179] As is also disclosed in U.S. Pat. No.
6,306,615, "Pentafluorophenylsulfonamidobenzenes and related sulfhydryl
and disulfide modifying agents (see, e.g., compound 1;
2-fluoro-1-methoxy-4-pentafluorophenylsulfonamidobenzene; . . . prevent
microtubule formation by selectively covalently modifying
.beta.-tubulin. For example, compound 1 does not covalently modify all
of the five known .beta.-tubulin isotypes. Instead, binding is
restricted to those .beta.-tubulin isotypes that have a cysteine
residue at amino acid position 239 in .beta.-tubulin. Such isotypes
include beta-1, beta-2, and beta-4. The other two isotypes (beta-3 and
beta-5) have a serine residue at this particular position (Shan et al.,
Proc. Nat'l Acad. Sci USA 96:5686-5691 (1999)). It is notable that no
other cellular proteins are modified by compound 1." In one embodiment
of this invention, the anti-mitotic compound of this invention
selectively covalently modifies certain beta-tubulin isotypes but does
not covalently modify other proteins.
[0180] U.S. Pat. No. 6,362,321. the entire
disclosure of which is hereby incorporated by reference into this
specification, discusses taxol-resistant cancer cell lines. At column 1
of this patent, it is disclosed that: "Many of the most common
carcinomas, including breast and ovarian cancer, are initially
relatively sensitive to a wide variety chemotherapy agents. However,
acquired drug resistance phenotype typically occurs after months or
years of exposure to chemotherapy. Determining the molecular basis of
drug resistance may offer opportunities for improved diagnostic and
therapeutic strategies."
[0181] As is also disclosed in U.S. Pat. No.
6,362,32, "Taxol is a natural product derived from the bark of Taxus
brevafolio (Pacific yew). Taxol inhibits microtubule depolymerization
during mitosis and results in subsequent cell death. Taxol displays a
broad spectrum of tumorcidal activity including against breast, ovary
and lung cancer (McGuire et al., 1996, N. Engld. J. Med. 334:1-6; and
Johnson et al., 1996, J. Clin. Ocol. 14:2054-2060). While taxol is
often effective in treatment of these malignancies, it is usually not
curative because of eventual development of taxol resistance. Cellular
resistance to taxol may include mechanisms such as enhanced expression
of P-glycoprotein and alterations in tubulin structure through gene
mutations in the .beta. chain or changes in the ratio of tubulin
isomers within the polymerized microtubule (Wahl et al., 1996, Nature
Medicine 2:72-79; Horwitz et al., 1993, Natl. Cancer Inst. 15:55-61;
Haber et al., 1995, J. Biol. Chem. 270:31269-31275; and Giannakakou et
al., 1997, J. Biol. Chem. 272:17118-17125). Some tumors acquires taxol
resistance through unknown mechanisms."
[0182] International publication WO02/36603A2, the
entire disclosure of which is hereby incorporated by reference into
this specification, discloses nucleic acid molecules comprising a
nucleotide sequence encoding a tubulin molecule. At pages 1 et seq. of
this patent document, it is disclosed that: "Microtubules are essential
to the eucaryotic cell due as they are involved in many processes and
functions such as, e.g., being components of the cytoskeleton, of the
centrioles and ciliums and in the formation of spindle fibres during
mitosis. The constituents of microtubules are heterodimers consisting
of one alpha-tubulin molecule and one beta-tubulin molecule. These two
related self-associating 50 kDa proteins are encoded by a multigen
family. The various members of this multigen family are dispersed all
over the human genorne. Both alpha-tubulin and beta-tubulin are most
likely to originate from a common ancestor as their amino acid sequence
shows a homology of up to 50%. In man there are at least 15 genes or
pseudogenes for tubulin.
[0183] As is also disclosed in International
Publication WO0236603, "The conservation of structure and regulatory
functions among the beta-tubulin genes in three vertebrate species
(chicken, mouse and human) allowed the identification of and
categorization into six major classes of beta-tubulin polypeptide
isotypes on the basis of their variable carboxyterminal ends. The
specific, highly variable 15 carboxyterminal amino acids are very
conserved among the various species. Beta-tubulins of categories I, 11,
and IV are closely related differing only 2-4% in contrast to
categories III, V and VI which differ in 8-16% of amino acid positions
[Sullivan K. F., 1988, Ann. Rev. Cell Biol. 4: 687-716].
[0184] As is also disclosed in International
Publication WO0236603, "Also the expression pattern is very similar
between the various species as can be taken from the following table
[Sullivan K. F., 1988, Arm. Rev. Cell Biol. 4: 687-716] which comprises
the respective human members of each class . . . . The C terminal end
of the beta-tubulins starting from amino acid 430 is regarded as highly
variable between the various classes. Additionally, the members of the
same class seem to be very conserved between the various species."
[0185] As is also disclosed in International
Publication WO0236603, "As tubulin molecules are involved in many
processes and form part of many structures in the eucaryotic cell, they
are possible targets for pharmaceutically active compounds. As tubulin
is more particularly the main structural component of the microtubules
it may act as point of attack for anticancer drugs such as vinblastin,
colchicin, estramustin and taxol which interfere with microtubule
function. The mode of action is such that cytostatic agents such as the
ones mentioned above, bind to the carboxyterminal end the beta-tubulin
which upon such binding undergoes a conformational change. For example,
Kavallaris et al. [Kavallaris et al. 1997, J.Clin. Invest. 100:
1282-1293] reported a change in the expression of of specific beta-
tubulin isotypes (class I, II, III, and IVa) in taxol resistant
epithelial ovarian tumor. It was concluded that these tubulins are
involved in the formation of the taxol resistence. Also a high
expression of class III beta-tubulins was found in some forms of lung
cancer suggesting that this isotype may be used as a diagnostic
marker."
[0186] As is also disclosed in International
Publication WO0236603, "The problem underlying the present invention
was to provide the means to further characterize the various tubulins
present in eucaryotic cells. A further problem underlying the present
invention was to provide the means to extend possible screening
programs for cytostatic agents to other isotypes of human
beta-tubulins. This problem is solved in a first aspect by a nucleic
acid molecule comprising a nucleotide sequence encoding a tubulin
molecule, wherein said nucleic acid molecule comprises the sequence
according to SEQ. ID. No. 1 This problem is solved in a second aspect
by a nucleic acid molecule comprising a nucleotide sequence encoding a
tubulin molecule, wherein said nucleic acid molecule comprises the
sequence according to SEQ. ID. No. 2." The aforementioned SEQ. ID. No.
1 and SEQ. ID. No. 2 are referred to herein as SEQ. ID No. 291 and 292
respectively.
[0187] Published United States patent application
2002/0106705, the entire disclosure of which is hereby incorporated by
reference into this specification, describes a method for detecting a
modified beta-tubulin isotype. Claim 1 of this patent, which is
typical, describes: "A method of detecting in a sample a .beta.-tubulin
isotype modified at cysteine residue 239, the method comprising the
steps of: (a) providing a sample treated with a .beta.-tubulin
modifying agent; (b) contacting the sample with an antibody that
specifically binds to a .beta.-tubulin isotype modified at cysteine
residue 239; and (c) determining whether the sample contains a modified
.beta.-tubulin isotype by detecting the antibody." This patent
discloses that: "Microtubules are composed of .alpha./.beta.-tubulin
heterodimers and constitute a crucial component of the cell
cytoskeleton. Furthermore, microtubules play a pivotal role during cell
division, in particular when the replicated chromosomes are separated
during mitosis. Interference with the ability to form microtubules from
.alpha./.beta.-tubulin heterodimeric subunits generally leads to cell
cycle arrest. This event can, in certain cases, induce programmed cell
death. Thus, natural products and organic compounds that interfere with
microtubule formation have been used successfully as chemotherapeutic
agents in the treatment of various human cancers."
[0188] Published United States patent application
2002/0106705 also discloses that: "Pentafluorophenylsulfonamidobenzenes
and related sulfhydryl and disulfide modifying agents (see, e.g.,
compound 1; 2-fluoro-1-methoxy-4-pentafluorophenylsulfonamidobenzene .
. . prevent microtubule formation by selectively covalently modifying
.beta.-tubulin. For example, compound 1 does not covalently modify all
of the five known .beta.-tubulin isotypes. Instead, binding is
restricted to those .beta.-tubulin isotypes that have a cysteine
residue at amino acid position 239 in .beta.-tubulin. Such isotypes
include .beta.1, .beta.2 and .beta.4-tubulin. The other two isotypes
(.beta.3 and .beta.5) have a serine residue at this particular position
(Shan et al., Proc. Nat'l Acad. Sci USA 96:5686-5691 (1999)). It is
notable that no other cellular proteins are modified by compound 1."
[0189] Published United States paent application
2002/0106705 relates primarily to a " . . . a .beta.-tubulin isotype
modified at cysteine residue 239 . . . ." Thus, at page 3 of this
published patent application, in defining a "beta-tubulin modifying
agent," it describes such agent as follows: "A ".beta.-tubulin
modifying agent" refers to an agent that has the ability to
specifically react with an amino acid residue of .beta.-tubulin,
preferably a cysteine, more preferably the cysteine residue at position
239 of a .beta.-tubulin isotype such as .beta.1- .beta.2- or
.beta.4-tubulin and antigenic fragments thereof comprising the residue,
preferably cysteine 239. The .beta.-tubulin modifying agent of the
invention can be, e.g., any sulfhydryl or disulfide modifying agent
known to those of skill in the art that has the ability to react with
the sulfur group on a cysteine residue, preferably cysteine residue 239
of a .beta.-tubulin isotype. Preferably, the .beta.-tubulin modifying
agents are substituted benzene compounds,
pentafluorobenzenesulfonamides, arylsulfonanilide phosphates, and
derivatives, analogs, and substituted compounds thereof (see, e.g.,
U.S. Pat. No. 5,880,151; PCT 97/02926; PCT 97/12720; PCT 98/16781; PCT
99/13759; and PCT 99/16032, herein incorporated by reference; see also
Pierce Catalogue, 1999/2000, and Means, Chemical Modification of
Proteins). In one embodiment, the agent is
2-fluoro-1-methoxy-4-pentafluorophenylsulfonamidobenzene (compound 1;
FIG. 1C). Modification of a .beta.-tubulin isotype at an amino acid
residue, e.g., cysteine 239, by an agent can be tested by treating a
.beta.-tubulin peptide, described herein, with the putative agent,
followed by, e.g., elemental analysis for a halogen, e.g., fluorine,
reverse phase HPLC, NMR, or sequencing and HPLC mass spectrometry.
Optionally compound 1 described herein can be used as a positive
control. Similarly, an .alpha.-tubulin modifying agent refers to an
agent having the ability to specifically modify an amino acid residue
of an .alpha.-tubulin."
[0190] U.S. Pat. No. 6,541,509, the entire
disclosure of which is hereby incorporated by reference into this
specification, discloses a "method for treating neoplasis using
combination chemotherapy." Claim 1 of this patent describes: "A method
of treating neoplasia in a subject in need of treatment, comprising
administering to the subject an amount of paclitaxel effective to treat
the neoplasia, in combination with an amount of discodermolide
effective to treat the neoplasia, wherein a synergistic antineoplastic
effect results." At column 6 of this patent, the patentees discuss how
to determine synergy between two drugs. They state that: One measure of
synergy between two drugs is the combination index (CI) method of Chou
and Talalay [37], which is based on the median-effect principle. This
method calculates the degree of synergy, additivity, or antagonism
between two drugs at various levels of cytotoxicity. Where the CI value
is less than 1, there is synergy between the two drugs. Where the CI
value is 1, there is an additive effect, but no synergistic effect. CI
values greater than 1 indicate antagonism. The smaller the CI value,
the greater the synergistic effect. Another measurement of synergy is
the fractional inhibitory concentration (FIC) [48]. This fractional
value is determined by expressing the IC50 of a drug acting in
combination, as a function of the IC50 of the drug acting alone. For
two interacting drugs, the sum of the FIC value for each drug
represents the measure of synergistic interaction. Where the FIC is
less than 1, there is synergy between the two drugs. An FIC value of 1
indicates an additive effect. The smaller the FIC value, the greater
the synergistic interaction. In the method of the present invention,
combination therapy using paclitaxel and discodermolide preferably
results in an antineoplastic effect that is greater than additive, as
determined by any of the measures of synergy known in the art." The
cited Chou et al. reference is an entited "Quantitative analysis of
dose effect relationships: the combined effect of multiple drugs or
enzyme inhibitors," Adv. Enzyme Regul., 11:27-56 (1984). The cited
"reference 48 is an article by Hall et al., "The fractional inhibitory
concentration (FIC) as a measure of synergy," J. Antimicrob.
Chemother., 11 (5):427-433 (1983).
[0191] Claim 8 of U.S. Pat. No. 6,541,509 describes
"A synergistic combination of antineoplastic agents, comprising an
effective antimenoplastic amount of paclitaxel and an effective
antineoplastic amount of discodermolide." As one embodiment of the
instant invention, applicants claims: A synergistic combination of
antineoplastic agents, comprising an effective antimenoplastic amount
of paclitaxel and an effective antineoplastic amount of the preferred,
magnetic anti-mitotic compound of this inventon. Thus, the process of
such U.S. Pat. No. 6,541,509 may be adapted to use the magnetic
compound of this invention instead of discodermolide.
[0192] As is disclosed in U.S. Pat. No. 6,541,509,
"The present invention provides a method of treating neoplasia in a
subject in need of treatment. As used herein, `neoplasia` refers to the
uncontrolled and progressive multiplication of cells under conditions
that would not elicit, or would cause cessation of, multiplication of
normal cells. Neoplasia results in the formation of a `neoplasm`, which
is defined herein to mean any new and abnormal growth, particularly a
new growth of tissue, in which the growth is uncontrolled and
progressive. Malignant neoplasms are distinguished from benign in that
the former show a greater degree of anaplasia, or loss of
differentiation and orientation of cells, and have the properties of
invasion and metastasis. Thus, neoplasia includes `cancer`, which
herein refers to a proliferation of cells having the unique trait of
loss of normal controls, resulting in unregulated growth, lack of
differentiation, local tissue invasion, and metastasis." As support for
this statement, the patent cited a work by Beers and Berkow (eds.), The
Merck Manual of Diagnosis and Therapy, 17.sup.th edition (Whitehouse
Station, N.J.; Merck Research Laboratories, 1999, 973-974, 976, 986,
and 991).
[0193] As is also disclosed in U.S. Pat. No.
6,541,509, " . . . neoplasia is treated in a subject in need of
treatment by administering to the subject an amount of paclitaxel
effective to treat the neoplasia, in combination with an amount of
discodermolide effective to treat the neoplasia, wherein a synergistic
antineoplastic effect results. The subject is preferably a mammal
(e.g., humans, domestic animals, and commercial animals, including
cows, dogs, monkeys, mice, pigs, and rats), and is most preferably a
human." In the embodiment described in this specification, the magnetic
compound of this invention replaces discomdermolide.
[0194] As is also disclosed in U.S. Pat. No.
6,541,509, " . . . `paclitaxel` refers to paclitaxel and analogues and
derivatives thereof, including, for example, a natural or synthetic
functional variant of paclitaxel which has paclitaxel biological
activity, as well as a fragment of paclitaxel having paclitaxel
biological activity. As further used herein, the term "paclitaxel
biological activity" refers to paclitaxel activity which interferes
with cellular mitosis by affecting microtubule formation and/or action,
thereby producing antimitotic and antineoplastic effects. Furthermore,
as used herein, `antineoplastic` refers to the ability to inhibit or
prevent the development or spread of a neoplasm, and to limit, suspend,
terminate, or otherwise control the maturation and proliferation of
cells in a neoplasm."
[0195] As is also disclosed in U.S. Pat. No.
6,541,509, "Methods of preparing paclitaxel and its analogues and
derivatives are well-known in the art, and are described, for example,
in U.S. Pat. Nos. 5,569,729; 5,565,478; 5,530,020; 5,527,924;
5,484,809; 5,475,120; 5,440,057; and 5,296,506. Paclitaxel and its
analogues and derivatives are also available commercially. Synthetic
paclitaxel, for example, can be obtained from Bristol-Myers Squibb
Company, Oncology Division (Princeton, N.J.), under the registered
trademark Taxol. Taxol for injection may be obtained in a single-dose
vial, having a concentration of 30 mg/5 mL (6 mg/mL per 5 mL) [47].
Taxol and its analogues and derivatives have been used successfully to
treat leukemias and tumors. In particular, Taxol is useful in the
treatment of breast, lung, and ovarian cancers. Discodermolide and its
analogues and derivatives can be isolated from extracts of the marine
sponge, Discodermia dissoluta, as described, for example, in U.S. Pat.
Nos. 5,010,099 and 4,939,168. Discodermolide and its analogues and
derivatives also may be synthesized, as described, for example, in U.S.
Pat. No. 6,096,904. Moreover, both paclitaxel and discodermolide may be
synthesized in accordance with known organic chemistry procedures [46]
that are readily understood by one skilled in the art."
[0196] As is also disclosed in U.S. Pat. No.
6,541,509, "In the method of the present invention, an amount of
paclitaxel or discodermolide that is `effective to treat the neoplasia`
is an amount that is effective to ameliorate or minimize the clinical
impairment or symptoms of the neoplasia, in either a single or multiple
dose. For example, the clinical impairment or symptoms of the neoplasia
may be ameliorated or minimized by diminishing any pain or discomfort
suffered by the subject; by extending the survival of the subject
beyond that which would otherwise be expected in the absence of such
treatment; by inhibiting or preventing the development or spread of the
neoplasm; or by limiting, suspending, terminating, or otherwise
controlling the maturation and proliferation of cells in the neoplasm.
For example, doses of paclitaxel (Taxol) administered intraperitoneally
may be between 1 and 10 mg/kg, and doses administered intravenously may
be between 1 and 3 mg/kg, or between 135 mg/m2 and 200 mg/m2. However,
the amounts of paclitaxel and discodermolide effective to treat
neoplasia in a subject in need of treatment will vary depending on the
particular factors of each case, including the type of neoplasm, the
stage of neoplasia, the subject's weight, the severity of the subject's
condition, and the method of administration. These amounts can be
readily determined by the skilled artisan."
[0197] As is also disclosed in U.S. Pat. No.
6,541,509, "The method of the present invention may be used to treat
neoplasia in a subject in need of treatment. Neoplasias for which the
present invention will be particularly useful include, without
limitation, carcinomas, particularly those of the bladder, breast,
cervix, colon, head, kidney, lung, neck, ovary, prostate, and stomach;
lymphocytic leukemias, particularly acute lymphoblastic leukemia and
chronic lymphocytic leukemia; myeloid leukemias, particularly acute
monocytic leukemia, acute promyelocytic leukemia, and chronic
myelocytic leukemia; malignant lymphomas, particularly Burkitt's
lymphoma and Non-Hodgkin's lymphoma; malignant melanomas;
myeloproliferative diseases; sarcomas, particularly Ewing's sarcoma,
hemangiosarcoma, Kaposi's sarcoma, liposarcoma, peripheral
neuroepithelioma, and synovial sarcoma; and mixed types of neoplasias,
particularly carcinosarcoma and Hodgkin's disease [45]. Preferably, the
method of the present invention is used to treat breast cancer, colon
cancer, leukemia, lung cancer, malignant melanoma, ovarian cancer, or
prostate cancer." The aforementioned neoplasias may also be treated by
the process of the instant invention.
[0198] As is also disclosed in U.S. Pat. No.
6,541,509, "In the method of the present invention, paclitaxel is
administered to a subject in combination with discodermolide, such that
a synergistic antineoplastic effect is produced. A `synergistic
antineoplastic effect` refers to a greater-than-additive antineoplastic
effect which is produced by a combination of two drugs, and which
exceeds that which would otherwise result from individual
administration of either drug alone. Administration of paclitaxel in
combination with discodermolide unexpectedly results in a synergistic
antineoplastic effect by providing greater efficacy than would result
from use of either of the antineoplastic agents alone. Discodermolide
enhances paclitaxel's effects. Therefore, lower doses of one or both of
the antineoplastic agents may be used in treating neoplasias, resulting
in increased therapeutic efficacy and decreased side-effects." As will
be apparent, in applicants' invention the discodermolide is replaced by
the magnetic anti-mitotic compound described in this specification.
[0199] As is also disclosed in U.S. Pat. No.
6,541,509, "Discodermolide also may provide a means to circumvent
clinical resistance due to overproduction of P-glycoprotein.
Accordingly, the combination of paclitaxel and discodermolide may be
advantageous for use in subjects who exhibit resistance to paclitaxel
(Taxol). Since Taxol is frequently utilized in the treatment of human
cancers, a strategy to enhance its utility in the clinical setting, by
combining its administration with that of discodermolide, may be of
great benefit to many subjects suffering from malignant neoplasias,
particularly advanced cancers." The comments made regading
discodermolide are equally applicable to applicants' magnetic
anti-mitotic agent.
[0200] As is also disclosed in U.S. Pat. No.
6,541,509, "In the method of the present invention, administration of
paclitaxel `in combination with` discodermolide refers to
co-administration of the two antineoplastic agents. Co-administration
may occur concurrently, sequentially, or alternately. Concurrent
co-administration refers to administration of both paclitaxel and
discodermolide at essentially the same time. For concurrent
co-administration, the courses of treatment with paclitaxel and with
discodermolide may be run simultaneously. For example, a single,
combined formulation, containing both an amount of paclitaxel and an
amount of discodermolide in physical association with one another, may
be administered to the subject. The single, combined formulation may
consist of an oral formulation, containing amounts of both paclitaxel
and discodermolide, which may be orally administered to the subject, or
a liquid mixture, containing amounts of both paclitaxel and
discodermolide, which may be injected into the subject." The same means
of administration may be used in the process of the instant inventin.
[0201] As is also disclosed in U.S. Pat. No.
6,541,509, "It is also within the confines of the present invention
that an amount of paclitaxel and an amount of discodermolide may be
administered concurrently to a subject, in separate, individual
formulations. Accordingly, the method of the present invention is not
limited to concurrent co-administration of paclitaxel and
discodermolide in physical association with one another." The same
means of administration may be used in the process of the instant
invention.
[0202] As is also disclosed in U.S. Pat. No.
6,541,509, "In the method of the present invention, paclitaxel and
discodermolide also may be co-administered to a subject in separate,
individual formulations that are spaced out over a period of time, so
as to obtain the maximum efficacy of the combination. Administration of
each drug may range in duration from a brief, rapid administration to a
continuous perfusion. When spaced out over a period of time,
co-administration of paclitaxel and discodermolide may be sequential or
alternate. For sequential co-administration, one of the antineoplastic
agents is separately administered, followed by the other. For example,
a full course of treatment with paclitaxel may be completed, and then
may be followed by a full course of treatment with discodermolide.
Alternatively, for sequential co-administration, a full course of
treatment with discodermolide may be completed, then followed by a full
course of treatment with paclitaxel. For alternate co-administration,
partial courses of treatment with paclitaxel may be alternated with
partial courses of treatment with discodermolide, until a full
treatment of each drug has been administered." The same means of
administration may be used in the process of the instant invention.
[0203] As is also disclosed in U.S. Pat. No.
6,541,509, "The antineoplastic agents of the present invention (i.e.,
paclitaxel and discodermolide, either in separate, individual
formulations, or in a single, combined formulation) may be administered
to a human or animal subject by known procedures, including, but not
limited to, oral administration, parenteral administration (e.g.,
intramuscular, intraperitoneal, intravascular, intravenous, or
subcutaneous administration), and transdermal administration.
Preferably, the antineoplastic agents of the present invention are
administered orally or intravenously." The same means of administration
may be used in the process of the instant invention.
[0204] As is also disclosed in U.S. Pat. No.
6,541,509, "For oral administration, the formulations of paclitaxel and
discodermolide (whether individual or combined) may be presented as
capsules, tablets, powders, granules, or as a suspension. The
formulations may have conventional additives, such as lactose,
mannitol, corn starch, or potato starch. The formulations also may be
presented with binders, such as crystalline cellulose, cellulose
derivatives, acacia, corn starch, or gelatins. Additionally, the
formulations may be presented with disintegrators, such as corn starch,
potato starch, or sodium carboxymethyl-cellulose. The formulations also
may be presented with dibasic calcium phosphate anhydrous or sodium
starch glycolate. Finally, the formulations may be presented with
lubricants, such as talc or magnesium stearate." The same means of
administration may be used in the process of the instant invention.
[0205] As is also disclosed in U.S. Pat. No.
6,541,509, "For parenteral administration, the formulations of
paclitaxel and discodermolide (whether individual or combined) may be
combined with a sterile aqueous solution which is preferably isotonic
with the blood of the subject. Such formulations may be prepared by
dissolving a solid active ingredient in water containing
physiologically-compatible substances, such as sodium chloride,
glycine, and the like, and having a buffered pH compatible with
physiological conditions, so as to produce an aqueous solution, then
rendering said solution sterile. The formulations may be presented in
unit or multi-dose containers, such as sealed ampules or vials.
Moreover, the formulations may be delivered by any mode of injection,
including, without limitation, epifascial, intracapsular,
intracutaneous, intramuscular, intraorbital, intraperitoneal
(particularly in the case of localized regional therapies),
intraspinal, intrasternal, intravascular, intravenous, parenchymatous,
or subcutaneous." The same means of administration may be used in the
process of the instant invention.
[0206] As is also disclosed in U.S. Pat. No.
6,541,509, "For transdermal administration, the formulations of
paclitaxel and discodermolide (whether individual or combined) may be
combined with skin penetration enhancers, such as propylene glycol,
polyethylene glycol, isopropanol, ethanol, oleic acid,
N-methylpyrrolidone, and the like, which increase the permeability of
the skin to the antineoplastic agent, and permit the antineoplastic
agent to penetrate through the skin and into the bloodstream. The
antineoplastic agent/enhancer compositions also may be further combined
with a polymeric substance, such as ethylcellulose, hydroxypropyl
cellulose, ethylene/vinylacetate, polyvinyl pyrrolidone, and the like,
to provide the composition in gel form, which may be dissolved in a
solvent such as methylene chloride, evaporated to the desired
viscosity, and then applied to backing material to provide a patch."
The same means of administration may be used in the process of the
instant invention.
[0207] As is also disclosed in U.S. Pat. No.
6,541,509, "It is within the confines of the present invention that the
formulations of paclitaxel and discodermolide (whether individual or
combined) may be further associated with a pharmaceutically-acceptable
carrier, thereby comprising a pharmaceutical composition. The
pharmaceutically-acceptable carrier must be "acceptable" in the sense
of being compatible with the other ingredients of the composition, and
not deleterious to the recipient thereof. Examples of acceptable
pharmaceutical carriers include Cremophor.TM. (a common vehicle for
Taxol), as well as carboxymethyl cellulose, crystalline cellulose,
glycerin, gum arabic, lactose, magnesium stearate, methyl cellulose,
powders, saline, sodium alginate, sucrose, starch, talc, and water,
among others. Formulations of the pharmaceutical composition may
conveniently be presented in unit dosage." The same means of
administration may be used in the process of the instant invention.
[0208] As is also disclosed in U.S. Pat. No.
6,541,509, "The formulations of the present invention may be prepared
by methods well-known in the pharmaceutical art. For example, the
active compound may be brought into association with a carrier or
diluent, as a suspension or solution. Optionally, one or more accessory
ingredients (e.g., buffers, flavoring agents, surface active agents,
and the like) also may be added. The choice of carrier will depend upon
the route of administration. The pharmaceutical composition would be
useful for administering the antineoplastic agents of the present
invention (i.e., paclitaxel and discodermolide, and their analogues and
derivatives, either in separate, individual formulations, or in a
single, combined formulation) to a subject to treat neoplasia. The
antineoplastic agents are provided in amounts that are effective to
treat neoplasia in the subject. These amounts may be readily determined
by the skilled artisan." Similar formulations may be used in the
process of the instant invention.
[0209] As is also disclosed in U.S. Pat. No.
6,541,509, "It is also within the confines of the present invention
that paclitaxel and discodermolide be co-administered in combination
with radiation therapy or an antiangiogenic compound (either natural or
synthetic). Examples of antiangiogenic compounds with which paclitaxel
and discodermolide may be combined include, without limitation,
angiostatin, tamoxifen, thalidomide, and thrombospondin." Similar
compositons may be used in the process of the instant invention.
[0210] As is also disclosed in U.S. Pat. No.
6,541,509, "The present invention further provides a synergistic
combination of antineoplastic agents. As defined above,
`antineoplastic` refers to the ability to inhibit or prevent the
development or spread of a neoplasm, and to limit, suspend, terminate,
or otherwise control the maturation and proliferation of cells in a
neoplasm. As used herein, a "synergistic combination of antineoplastic
agents" refers to a combination of antineoplastic agents that achieves
a greater antineoplastic effect than would otherwise result if the
antineoplastic agents were administered individually. Additionally, as
described above, the "antineoplastic agents" of the present invention
are paclitaxel and discodermolide, and their analogues and derivatives,
either in separate, individual formulations, or in a single, combined
formulation. Administration of paclitaxel in combination with
discodermolide unexpectedly results in a synergistic antineoplastic
effect by providing greater efficacy than would result from use of
either of the antineoplastic agents alone." Similar synergistic
combinations may be used in the process of the instant invention.
[0211] As is also disclosed in U.S. Pat. No.
6,541,509, "In the synergistic combination of the present invention,
paclitaxel and discodermolide may be combined in a single formulation,
such that the amount of paclitaxel is in physical association with the
amount of discodermolide. This single, combined formulation may consist
of an oral formulation, containing amounts of both paclitaxel and
discodermolide, which may be orally administered to the subject, or a
liquid mixture, containing amounts of both paclitaxel and
discodermolide, which may be injected into the subject." Similar
synergistic combinations may be used in the process of the instant
invention.
[0212] As is also disclosed in U.S. Pat. No.
6,541,509, "Alternatively, in the synergistic combination of the
present invention, a separate, individual formulation of paclitaxel may
be combined with a separate, individual formulation of discodermolide.
For example, an amount of paclitaxel may be packaged in a vial or unit
dose, and an amount of discodermolide may be packaged in a separate
vial or unit dose. A synergistic combination of paclitaxel and
discodermolide then may be produced by mixing the contents of the
separate vials or unit doses in vitro. Additionally, a synergistic
combination of paclitaxel and discodermolide may be produced in vivo by
co-administering to a subject the contents of the separate vials or
unit doses, according to the methods described above. Accordingly, the
synergistic combination of the present invention is not limited to a
combination in which amounts of paclitaxel and discodermolide are in
physical association with one another in a single formulation." Similar
synergistic combinations may be used in the process of the instant
invention.
[0213] As is also disclosed in U.S. Pat. No.
6,541,509, "The synergistic combination of the present invention
comprises an effective antineoplastic amount of paclitaxel and an
effective antineoplastic amount of discodermolide. As used herein, an
`effective antineoplastic amount` of paclitaxel or discodermolide is an
amount of paclitaxel or discodermolide that is effective to ameliorate
or minimize the clinical impairment or symptoms of neoplasia in a
subject, in either a single or multiple dose. For example, the clinical
impairment or symptoms of neoplasia may be ameliorated or minimized by
diminishing any pain or discomfort suffered by the subject; by
extending the survival of the subject beyond that which would otherwise
be expected in the absence of such treatment; by inhibiting or
preventing the development or spread of the neoplasm; or by limiting,
suspending, terminating, or otherwise controlling the maturation and
proliferation of cells in the neoplasm." These comments are equally
applicable to the process of the instant invention, in which
discodermolide is replaced by the magnetic anti-mitotic compound of
this invention.
[0214] As is also discussed in U.S. Pat. No.
6,541,509, "The effective antineoplastic amounts of paclitaxel and
discodermolide will vary depending on the particular factors of each
case, including the type of neoplasm, the stage of neoplasia, the
subject's weight, the severity of the subject's condition, and the
method of administration. For example, effective antineoplastic amounts
of paclitaxel (Taxol) administered intraperitoneally may range from 1
to 10 mg/kg, and doses administered intravenously may range from 1 to 3
mg/kg, or from 135 mg/m2 to 200 mg/m2. Nevertheless, the appropriate
effective antineoplastic amounts of paclitaxel and discodermolide can
be readily determined by the skilled artisan." These comments are
equally applicable to the process of the instant invention, in which
discodermolide is replaced by the magnetic anti-mitotic compound of
this invention
[0215] As is also disclosed in U.S. Pat. No.
6,541,509, "The synergistic combination described herein may be useful
for treating neoplasia in a subject in need of treatment. Paclitaxel
and discodermolide, which comprise the synergistic combination of the
present invention, may be co-administered to a subject concurrently,
sequentially, or alternately, as described above. Moreover, the
paclitaxel and discodermolide of the present invention may be
administered to a subject by any of the methods, and in any of the
formulations, described above." These comments are equally applicable
to the process of the instant invention, in which discodermolide is
replaced by the magnetic anti-mitotic compound of this invention
[0216] By way of yet further illustration, and
referring to published United States patent application 2003/0235855
(the entire disclosure of which is hereby incorporated by reference
into this specification), claims an assay for the detection of
paclitaxel resistant cells in human tumors. Claim 4 of this published
patent application, which is typical, claims: "An isolated tubulin
amino acid sequence comprising an amino acid sequence having at least
one mutation, the mutation selected from the group consisting of a
mutation at position 210, a mutation at position 214, a mutation at
position 215, a mutation at position 216, a mutation at position 217, a
mutation at position 225, a mutation at position 228, a mutation at
position 270, a mutation at position 273, a mutation at position 292,
and a mutation at position 365 and any combination thereof."
[0217] At page 1 of published United States patent
application 2003/0235855, the importance of paclitaxel is discussed. It
is disclosed that "Paclitaxel (Taxol), Taxotere and other
paclitaxel-like drugs that are currently under development hold great
promise for the treatment of human cancer. Paclitaxel has shown
remarkable activity against breast and ovarian cancer, melanomas,
non-small lung carcinoma, esophogeal cancer, Kaposi's sarcoma, and some
hematological malignancies. It has been described as the most
significant antitumor drug developed in the last several decades and
will, without doubt, find widespread use in the treatment of cancer.
However, as is true of virtually all cancer chemotherapeutic drugs,
patients responsive to paclitaxel eventually relapse due to the
emergence of drug resistant tumor cells. Thus, there is a need in the
art for methods to identify paclitaxel-resistant tumor cells, for
agents that allow such identifications in a simple and cost effective
way, and for methods for to treat patients with paclitaxel resistant
tumor cells." The solution presented to this problem in such published
patent application is also described at page 1 thereof, wherein it is
stated that: "The present invention involves polynucleotide mutations
which confer paclitaxel resistance; mutant cells which are paclitaxel
resistant; and methods to determine paclitaxel resistance. The present
invention also provides a simple assay with sufficient sensitivity to
detect drug resistant cells in tumor biopsies by extracting
polynucleotide from the tissue. The extracted polynucleotide is then
hybridized to mutant-specific PCR primers and the mutant regions of
tubulin are identified by selective amplification. Once identified, a
secondary treatment protocol can be administered to the patient to aid
in tumor treatment."
[0218] At pages 2 et seq. of published United
States patent application 2003/0235855, the inventor discloses that " .
. . mutations able to conver resistance to paclitaxel are clustered in
several small regions of beta-tubulin." In paragraphs 0022 et seq., it
is disclosed that: "The inventor has found that mutations able to
confer resistance to paclitaxel are clustered in several small regions
of .beta.-tubulin (Tables I-III) including I210T, T214A, L215H, L215R,
L215F, L215A, L215E, L215M, L215P, K216A, L217R, L217N, L217A, L225M,
L228A, L228F, L228H, F270C, L273V, Q292H, and V365D. Of these 21
identified and sequenced mutant tubulins, 15 or 62% have a substitution
at leucine including locations 215, 217, 225, 228 and 273. Of the 15
total leucine mutants, 7 or 46.7% occur at leu215, 3 or 20% occur at
leu217, 3 or 20% occur at leu228, 1 or 6.7% occur at leu225 and 1 or
6.7% occur at leu273. The ability of 19 of the 21 total mutations to
confer paclitaxel resistance has been confirmed by transfecting mutant
cDNAs into wild-type cells."
[0219] It is also disclosed in published United
States patent application 2003/0235855 (commencing at page 3 thereof)
that:"The clustering of mutations affecting leucines is unusual and
unexpected. Also unexpected is the three relatively localized regions
of mutation, 210-217, 225-228, and 270-273, and two isolated sites of
mutations, 292 and 365. Although some of these regions appear distant
in the primary structure, they are actually close together in the
tertiary structure of .beta.-tubulin. The data support the hypothesis
that the mutations affect a critical interaction between tubulin
subunits necessary for microtubule assembly and that the mechanism of
paclitaxel is to facilitate this interaction." Thereafter, in the
middle of page 3 of such patent application, Table 1 is presented.
[0220] It is also disclosed in published United
States patent application 2003/0235855 (commencing at page 3 thereof)
that: "Table V below contains the corresponding .beta.-tubulin protein
sequences for the variants listed in Table I: L215H (Seq. No. 10);
L215R (Seq. No. 11); L215F (Seq. No. 12); L217R (Seq. No. 13); L228F
(Seq. No. 14); and L228H (Seq. No. 15).AII of these mutations result in
amino acid substitutions at 3 leucine residues that are within 14 amino
acids of one another." The aforementioned Seq. No. 10, 11, 12, 13, 14,
and 15 are listed in this application's sequence listing as SEQ. ID.
No. 293, 294, 295, 296, 297 and 298 respectively.
[0221] It is also disclosed in published United
States patent application 2003/0235855 (commencing at page 3 thereof)
that: "Using site-directed mutagenesis, the inventor has identified
additional mutations in the H6/H7 loop of beta tubulin (that contains
L215 and L217) that confer paclitaxel resistance. Table II lists the
cell line, a portion of the encoding region including the mutated codon
and the protein alteration." Thereafer, Table II is presented on page 3
of the patent application.
[0222] It is also disclosed in published United
States patent application 2003/0235855 (commencing at page 4 thereof)
that: "The corresponding .beta.-tubulin protein sequences (see Table
IV) are: T214A (Seq. No. 24), L215A (Seq. No. 25), L215E (Seq. No. 26),
L215M (Seq. No. 27), L215P (Seq. No. 28), K216A (Seq. No. 29), L217A
(Seq. No. 30) and L228A (Seq. No. 31). The present invention also
relates to probes having at least 12 bases including the codon for the
particular amino acid substitution." The aforementioned Seq. No. 24,
25, 26, 27, 28, 29, 30 and 31 are listed in this application's sequence
listing as SEQ. ID. No. 299, 300, 301, 302, 303, 304, 305, and 306
respectively.
[0223] It is also disclosed in published United
States patent application 2003/0235855 (commencing at page 3 thereof)
that: "More recently, the inventor has found that the number of
mutations that confer resistance to paclitaxel are likely to be small
and that most are clustered in a small region of .beta.-tubulin. The
likelihood that only a relatively small number of mutations will cause
paclitaxel resistance is indicated by the observation that a random
mutagenesis approach to find new mutations is recapitulating mutations
that have already been found by classical genetics, and by the
observation that mutations reported in different laboratories using
different cell lines are beginning to show overlap. New mutants
recently identified by the inventor in both CHO cells, and in the human
KB3 cervical carcinoma cell line, are summarized in Table m. The fact
that human mutations fall into the same region as the CHO mutations in
the tertiary structure, combined with the observation that some
mutations (not reported in this application) in CHO cells affect
residues that are altered in human cell lines, supports the conclusion
(based on identical amino acid sequences for .beta.-tubulin in the two
species) that mutations identified in CHO cells are expected to confer
drug resistance in human cells. The nucleotide sequences encoding the
new mutants are shown in Table III. 3 TABLE III" Thereafter, Table III
is repesented on page 4.
[0224] It is also disclosed in published United
States patent application 2003/0235855 (commencing at page 4 thereof)
that: "The new corresponding mutant CHO .beta.-tubulin protein
sequences (see Table IV) are: I210T (Ile to Thr at location 210) (Seq.
No. 39), L217N (Leu to Asn at location 217) (Seq. No. 40), F270C (Phe
to Cys at location 270) (Seq. No. 41) and Q292H (Gln to His at location
292) (Seq. No. 42). The new corresponding mutant human .beta.-tubulin
sequences are: L225M (Leu to Met at location 225) (Seq. No.43), L273V
(Leu to Val at location 273) (Seq. No. 44) and V365D (Val to Asp at
location 365) (Seq. No. 45)." The aforementioned Seq. No. 39, 40, 41,
42, 43, 44, and 45 are listed in this application's sequence listing as
SEQ. ID. No. 307, 308, 309, 310, 311, 312, and 313 respectively.
[0225] It is also disclosed in published United
States patent application 2003/0235855 (commencing at page 4 thereof)
that: "Table IV lists all of the nucleic acid and protein sequences in
sequence order that are described in this application along with their
sequence id number and abbreviated amino acid mutation." Thereafter,
Table IV is presented on pages 4 et seq.
[0226] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 8
thereof) that: "Because .alpha.-tubulin and .beta.-tubulin are similar
proteins, similar clustering of mutations are anticipated in
.alpha.-tubulin in paclitaxel resistant cells and .alpha.-tubulin PCR
mutant primer sequences can be constructed in a similar manner to the
primers presented herein for .beta.-tubulin in paclitaxel resistant
tumor cells."
[0227] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 8
thereof) that: "The assays of the present invention were performed
using Chinese hamster ovary (CHO) cells selected for resistance to
paclitaxel. It is important to note that human and hamster tubulin have
identical amino acid sequences and the nucleotide sequences are highly
homologous and the nucleotide differences do not alter the amino acid
sequence, and therefore, the amino acid changes found in mutant CHO
cells will also confer resistance in humans."
[0228] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 8
thereof) that: "It has been established that the most frequent
mechanism of resistance to paclitaxel occurs through mutations in
tubulin that affect the stability of the microtubules. These
paclitaxel-resistant cells assemble less microtubule polymer and are
frequently hypersensitive to other drugs such as vinblastine and
vincristine that inhibit microtubule assembly."
[0229] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 8
thereof) that: "A model to explain these observations is provided in
FIG. 1. The assay of the present invention can be used to identify many
or most patients in danger of relapse due to tumor cell mutation and
allow administration of alternate or additional treatment protocols
using such agents as vinblastine or vincristine which are highly
effective in eliminating the paclitaxel-resistant cells."
[0230] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 8
thereof) that: "The identification of the mutations and the clustering
of mutations within the tubulin genes provide the data to construct
highly efficient assays to detect these mutations in patients. Until
now, there has been no method available to easily detect paclitaxel
resistant cells in human tumors. The present methods or assays involve
the design and use of allele-specific oligonucleotide primers for PCR."
[0231] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 8
thereof) that: "One such assay has been successfully confirmed for
primers using the leu217 to arg mutation shown in FIG. 2. The wild-type
primer (CTCCGTAGGTGGGCGTGGTGA (Seq. No.46)) is able to amplify
wild-type DNA; but because of a 3' mismatch with the mutant allele, it
fails to amplify mutant DNA. Conversely, the mutant primer
(CTCCGTAGGTGGGCGTGCGC (Seq. No. 47)) is able to amplify mutant DNA, but
does not amplify the wild-type DNA because of 3' mismatch (underlined).
The mutant primer also contains an intentional mismatch to both
wild-type and mutant DNA at the third nucleotide from the 3' end
(underlined) in order to enhance its allele specificity." The
aforementioned Seq. No. 46 and 47 are listed in this application's
sequence listing as SEQ. ID. No. 314 and 315 respectively.
[0232] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 8
thereof) that: "Thus, allele-specific primers covering most potential
mutations can be used individually or a `cocktails` to detect the
mutations in a single or very few PCR reactions. Alternatively, assays
involving restriction enzyme digestion or allele-specific hybridization
using the mutant DNA sequences can be used, but may lack the
sensitivity and simplicity of the PCR assay."
[0233] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 9
thereof) that: "The high frequency of mutations affecting only a few
leucine residues of .alpha.-tubulin in paclitaxel-resistant mutants was
unexpected. Currently, there is no rational basis for predicting how an
individual patient will respond to paclitaxel therapy. An initial assay
of the tumor for mutations in tubulin that confer paclitaxel resistance
would help clinicians decide whether the patient is a good candidate
for paclitaxel therapy and save needless morbidity with a treatment
that is unlikely to be effective. It would also allow the clinician to
choose an alternative or additional therapy at an early time in the
disease progression, thereby enhancing the survival of the patient."
[0234] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 9
thereof) that: "Mammals express 6 .alpha.- and 6 .beta.-tubulin genes,
which are the targeted genes. To further optimize assays, it may be
necessary to determine which tubulin isotype is involved in paclitaxel
resistance for each type of tumor in certain instances. The tubulin is
expressed in a tissue specific manner, with some forms restricted to
certain tissues, which are widely disclosed in the prior art
literature. Furthermore, the present inventors have found in CHO cells
that the most abundant tubulin isotype is the one always involved in
conferring resistance, which was completely unexpected. Thus, one
skilled in the art must merely find the most abundant isotype for each
type of tumor, which is disclosed in many technical journal and prior
art references."
[0235] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 9
thereof) that: "Paclitaxel is the prototype for a novel class of agents
that inhibit cells in mitosis by promoting and stabilizing microtubule
assembly. Early studies with this compound demonstrated that it binds
to microtubules in a 1:1 stoichiometry with tubulin heterodimers
(Manfredi, J. J., Parness, J., and Horwitz, S. B. (1981) J. Cell Biol.
94, 688-696) and inhibits microtubule disassembly. It is also able to
induce microtubule assembly both in vitro and in vivo and induces
microtubule bundle formation in treated cells (Schiff, P. B., Fant, J.,
and Horwitz, S. B. (1979) Nature 277, 665-667 and Schiff, P. B., and
Horwitz, S. B. (1980) Proc. Natl. Acad. Sci. U.S.A. 77, 1561-1565).
Recent interest in this and related compounds has been fueled by
clinical studies demonstrating remarkable activity of paclitaxel
against a number of malignant diseases (Rowinsky, E. K., and Donehower,
R. C. (1995) N. E. J. Med. 332, 1004-1014). Although still in clinical
trials, the demonstrated activity of paclitaxel in phase 11 studies has
led to FDA approval for its use in refractory cases of breast and
ovarian cancer. As more patients are treated with this drug, clinical
resistance is expected to become an increasingly significant problem."
[0236] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 9
thereof) that: "The mechanisms by which tumor cells acquire resistance
to paclitaxel are not fully understood. Cell culture studies have shown
that paclitaxel is a substrate for the multidrug resistance pump
(gP170), and cells selected for high levels of resistance to the drug
have increased gP170 (Casazza, A. M., and Fairchild, C. R. (1996)
Cancer Treatment & Research 87, 149-71). Nevertheless, it has
yet to be demonstrated that this mechanism is significant in paclitaxel
refractory tumors. Indeed, the remarkable efficacy of paclitaxel in
early clinical studies of patients who were pretreated with Adriamycin,
a well known substrate for gP170, argues that the multidrug resistance
(mdr) phenotype may not be as clinically prevalent as had initially
been anticipated (Schiff, P. B., and Horwitz, S. B. (1980) Proc. Natl.
Acad. Sci. U.S.A. 77, 1561-1565)."
[0237] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 9
thereof) that: "Additional mechanisms of resistance to paclitaxel have
been reported. For example, several laboratories have provided evidence
that changes in the expression of specific .beta.-tubulin genes are
associated with paclitaxel resistance in cultured tumor cell lines
(Haber, M., Burkhart, C. A., Regl, D. L., Madafiglio, J., Norris, M.
D., and Horwitz, S. B. (1995) J. Biol. Chem. 270, 31269-75; Jaffrezou,
J. P., Dumontet, C., Derry, W. B., Duran, G., Chen, G., Tsuchiya, E.,
Wilson, L., Jordan, M. A., and Sikic, B. I. (1995) Oncology Res. 7,
517-27; Kavallaris, M., Kuo, D. Y. S., Burkhart, C. A., Regl, D. L.,
Norris, M. D., Haber, M., and Horwitz, S. B. (1997) J. Clin. Invest.
100, 1282-93; and Ranganathan, S., Dexter, D. W., Benetatos, C. A., and
Hudes, G. R. (1998) Biochim. Biophys. Acta 1395, 237-245). More
recently, a report describing mutations in .beta.-tubulin that make the
protein unresponsive to paclitaxel has appeared (Giannakakou, P.,
Sackett, D. L., Kang, Y.-K., Zhan, Z., Buters, J. T. M., Fojo, T., and
Poruchynsky, M. S. (1997) J. Biol. Chem. 272, 17118-17125). To date,
however, there is little evidence that any of the mechanisms described
in cell culture cause paclitaxel resistance in human tumors."
[0238] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 9
thereof) that "The inventor's own studies have described a resistance
mechanism mediated by tubulin alterations that affect microtubule
assembly (Cabral, F., and Barlow, S. B. (1991) Pharmac. Ther. 52,
159-171). Based on mutant properties and drug cross-resistance
patterns, it is proposed that these changes in microtubule assembly
could compensate for the presence of the drug (Cabral, F., Brady, R.
C., and Schibler, M. J. (1986) Ann. N.Y. Acad. Sci. 466, 745-756). The
inventors were later able to directly demonstrate that paclitaxel
resistant Chinese hamster ovary (CHO) cells have diminished microtubule
assembly compared to wild-type controls (Minotti, A. M., Barlow, S. B.,
and Cabral, F. (1991) J. Biol. Chem. 266, 3987-3994). Thus, isolation
of paclitaxel resistant mutants provides an opportunity to study
mutations that not only give information about the mechanisms of drug
action and resistance, but also give structural information about
regions of tubulin that are involved in assembly."
[0239] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page
10thereof) that: "The inventors have now sequenced 9 mutant
.beta.-tubulin alleles and find that the mutations cluster at a site
that is likely to be involved in lateral or longitudinal interactions
during microtubule assembly. Remarkably, these mutations are present in
the H6H7 region of of tubulin. Previously, it was believed that this
region was not associated with paclitaxel binding. However, the
inventors have isolated mutants in the H6H7 region, which are directly
related to paclitaxel resistence."
[0240] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 10
thereof) that: "There is some significance to the fact that all the
mutated residues are leucines--it certainly indicates that the changes
that produce taxol resistance are not random. One possibility is that
the leucines define a structural motif (e.g., analogous to a leucine
zipper, but clearly distinct) that forms an interaction site with a
neighboring subunit. A more trivial explanation is that the leucines
are among the least critical residues in the region and are therefore
better able to tolerate changes that produce the kind of subtle
alterations in tubulin assembly that give resistance to taxol. The fact
that the 3 leucines are highly conserved throughout all species and
that the conservation extends to alpha and even gamma tubulin would
tend to argue for the former alternative, but it will take a lot of
further experimentation before the true significance can be
elucidated."
[0241] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 10
thereof) that: "All 3 leucines in hamster are encoded by a CTC. Thus, a
single base change can lead to substitution of histidine, arginine,
phenylalanine, isoleucine, valine, or pro line. Only his, arg, and phe
were isolated in the mutant cell lines. By transfection of cDNA altered
by site-directed mutagenesis, is has been found that ile and val do not
produce taxol resistance, probably because they do not perturb the
structure of the microtubule sufficiently to produce resistance.
Proline substitution can cause resistance, but appears to do so when
expressed at very low levels. Moreover, the inventors have not been
able to express it at high levels. This suggests that pro was not
isolated in the mutant cell lines because it disrupts the structure of
microtubules too severely for the cells to survive."
[0242] It is also disclosed in United States
published patent application 2003/0235855 (commencing at page 10
thereof) that: "The codons for leucine in human DNA are CTG at
positions 215 and 217, and CTT at position 228. Single nucleotide
changes will produce the same amino acid substitutions at 228, but a
different set (valine, methionine, glutamine, arginine, or proline) at
215 and 217. Thus, 2 new possibilities (methionine and glutamine) might
be found at 215 or 217 in human cells resistant to taxol. Of the two,
methionine has been tested by transfection and it turns out to produce
borderline resistance even at high levels of expression. A glutamine
substitution has not yet been tested and should therefore be considered
a presumptive candidate for producing resistance."
A Preferred Anti-Mitotic Compound
[0243] In this section of the specification, a
preferred compound is discussed. The preferred compound of this
embodiment of the invention is an anti-mitotic compound. Anti-mitotic
compounds are known to those skilled in the art. Reference may be had,
e.g., to U.S. Pat. No. 6,723,858 (estrogenic compounds as anti-mitotic
agents), U.S. Pat. No. 6,528,676 (estrogenic compounds as anti-mitotic
agents), U.S. Pat. No. 6,350,777 (anti-mitotic agents which inhibit
tubulin polyumerization), U.S. Pat. No. 6,162,930 (anti-mitotic agents
which inhibit tubulin polymerization), U.S. Pat. No. 5,892,069
(estrogenic compounds as anti-mitotic agents), U.S. Pat. No. 5,886,025
(anti-mitotic agents which inhibit tubulin polymerization), U.S. Pat.
No. 5,661,143 (estrogenic compounds as anti-mitotic agents), U.S. Pat.
No. 3,997,506 (anti-mitotic derivatives of thiocolchicine), and the
like. The entire disclosure of each of these United States patents
applications is hereby incorporated by reference into this
specification.
[0244] These prior art anti-mitotic agents may be
modified, in accordance with the process of this invention, to make
them "magnetic," as that term is defined in this specification. In the
next section of this specification, a process for modifying prior art
taxanes to-make them "magnetic" is described.
Preparation and Use of Magnetic Taxanes
[0245] In this portion of the specification,
applicants will describe the preparation of certain magnetic taxanes
that may be used in one or more of the processes of his invention. The
process that is ued to make such taxanes magnetic and/or water soluble
may also be used to make other anti-mitotic compounds magnetic and/or
water soluble.
[0246] In one embodiment of the invention, a
biologically active substrate is linked to a magnetic carrier particle.
An external magnetic field may then be used to increase the
concentration of a magnetically linked drug at a predetermined
location.
[0247] One method for the introduction of a
magnetic carrier particle involves the linking of a drug with a
magnetic carrier. While some naturally occurring drugs inherently carry
magnetic particles (ferrimycin, albomycin, salmycin, etc.), it is more
common to generate a synthetic analog of the target drug and attach the
magnetic carrier through a linker.
Functionalized Taxanes
[0248] Paclitaxel and docetaxel are members of the
taxane family of compounds. A variety of taxanes have been isolated
from the bark and needles of various yew trees
[0249] In one embodiment of the invention, such a
linker is covalently attached to at least one of the positions in
taxane.
[0250] It is well known in the art that the
northern hemisphere of taxanes has been altered without significant
impact on the biological activity of the drug. Reference may be had to
Chapter 15 of Taxane Anticancer Agents, Basic Science and Current
Status, edited by G. George et al., ACS Symposium Series 583,
207.sup.th National Meeting of the American Chemical Society, San
Diego, Calif. (1994). Specifically the C-7, C-9, and C-10 positions of
paclitaxel have been significantly altered without degrading the
biological activity of the parent compound. Likewise the C-4 position
appears to play only a minor role. The oxetane ring at C-4 to C-5 has
been shown to be critical to biological activity. Likewise, certain
functional groups on the C-13 sidechain have been shown to be of
particular importance.
[0251] In one embodiment of the invention, a
position within paclitaxel is functionalized to link a magnetic carrier
particle. A number of suitable positions are presented below. It should
be understood that paclitaxel is illustrated in the figures below, but
other taxane analogs may also be employed. Attachment at C-4
[0252] C-4 taxane analogs have been previously
generated in the art. A wide range of methodologies exist for the
introduction of a variety of substituents at the C-4 position. By way
of illustration, reference may be had to "Synthesis and Biological
Evaluation of Novel C-4 Aziridine-Bearing Paclitaxel Analogs" by S.
Chen et al., J. Med. Chem. 1995, vol 38, pp 2263.
[0253] The secondary (C-13) and tertiary (C-1)
alcohols of 7-TES baccatin were protected using the procedure of Chen
(J. Org. Chem. 1994, vol 59, p 6156) while simultaneously unmasking the
alcohol at C-4. The resulting product was treated with a chloroformate
to yield the corresponding carboxylate. Removal of the silyl protecting
groups at C-1, C-7, and C-13, followed by selective re-protection of
the C-7 position gave the desired activated carboxylate. The compound
was then treated with a suitable nucleophile (in the author's case,
ethanolamine) to produce a C-4 functionalized taxane. The C-13
sidechain was installed using standard lactam methodology.
[0254] This synthetic scheme thus provides access
to a variety of C-4 taxane analogs by simply altering the nucleophile
used. In one embodiment of the instant invention, the nucleophile is
selected so as to allow the attachment of a magnetic carrier to the C-4
position.
Attachment at C-7
[0255] The C-7 position is readily accessed by the
procedures taught in U.S. Pat. No. 6,610,860. The alcohol at the C-10
position of 10-deacetylbaccatin III was selectively protected. The
resulting product was then allowed to react with an acid halide to
produce the corresponding ester by selectively acylating the C-7
position over the C-13 alcohol. Standard lactam methodology allowed the
installation of the C-13 sidechain. In another embodiment, baccatin
III, as opposed to its deacylated analog, is used as the starting
material.
[0256] Other C-7 taxane analogs are disclosed in,
U.S. Pat. Nos. 6,610,860; 6,359,154; and 6,673,833, the contents of
which are hereby incorporated by reference.
Attachment at C-9
[0257] It has been established that the C-9
carbonyl of paclitaxel is relatively chemically inaccessible, although
there are exceptions (see, for example, Tetrahedron Lett. Vol 35, p
4999). However, scientists gained access to C-9 analogs when
13-acetyl-9-dihydrobaccatin III was isolated from Taxus candidensis
(see J. Nat. Products, 1992, vol 55, p 55 and Tetrahedron Lett. 1992,
vol 33, p 5173). This triol is currently used to provide access to a
variety of such C-9 analogues.
[0258] In chapter 20 of Taxane Anticancer Agents,
Basic Science and Current Status, (edited by G. George et al., ACS
Symposium Series 583, 207.sup.th National Meeting of the American
Chemical Society, San Diego, Calif. (1994)) Klein describes a number of
C-7/C-9 taxane analogs. One of routes discussed by Klein begins with
the selective deacylation of 13-acetyl-9-dihydrobaccatin III, followed
by the selective protection of the C7 alcohol as the silyl ether. A
standard lactam coupling introduced the C-13 sidechain. The alcohols at
C-7 and C-9 were sufficiently differentiated to allow a wide range of
analogs to be generated. "In contrast to the sensitivity of the C-9
carbonyl series under basic conditions, the 9(R)-dihydro system can be
treated directly with strong base in order to alkylate the C-7 and/or
the C-9 hydroxyl groups."
[0259] One skilled in the art may adapt Klein's
general procedures to install a variety of magnetic carriers at these
positions. Such minor adaptations are routine for those skilled in the
art.
Attachment at C-7 and C-9
[0260] Klein also describes a procedure wherein
13-acetyl-9-dihydrobaccatin III is converted to 9-dihydrotaxol.
Reference may be had to "Synthesis of 9-Dihydrotaxol: a Novel Bioactive
Taxane" by L. L. Klein in Tetrahedron Lett. Vol 34, pp 2047-2050. An
intermediate in this synthetic pathway is the dimethylketal of
9-dihydrotaxol.
[0261] In one embodiment, the procedure of Klein is
followed with a carbonyl compound other than acetone to bind a wide
variety of groups to the subject ketal. Supplemental discussion of C-9
analogs is found in "Synthesis of 9-Deoxotaxane Analogs" by L. L. Klein
in Tetrahedron Lett. Vol 35, p 4707 (1994).
Attachment at C-10
[0262] In one embodiment of the invention, the C-10
position is functionalized using the procedure disclosed in U.S. Pat.
No. 6,638,973. This patent teaches the synthesis of paclitaxel analogs
that vary at the C-10 position. A sample of 10-deacetylbaccatin III was
acylated by treatment with propionic anhydride. The C-13 sidechain was
attached using standard lactam methodology after first performing a
selective protection of the secondary alcohol at the C-7 position. In
one embodiment of the invention, this procedure is adapted to allow
access to a variety of C-10 analogues of paclitaxel.
[0263] In one embodiment an anhydride is used as an
electrophile. In another embodiment, an acid halide is used. As would
be apparent to one of ordinary skill in the art, a variety of
electrophiles could be employed. Siderophores
[0264] In one embodiment, a member of the taxane
family of compounds is attached to a magnetic carrier particle.
Suitable carrier particles include siderophores (both iron and non-iron
containing), nitroxides, as well as other magnetic carriers.
[0265] Siderophores are a class of compounds that
act as chelating agents for various metals. Most organisms use
siderophores to chelate iron (III) although other metals may be
exchanged for iron (see, for example, Exchange of Iron by Gallium in
Siderophores by Emergy, Biochemistry 1986, vol 25, pages 4629-4633).
Most of the siderophores known to date are either catecholates or
hydroxamic acids.
[0266] Representative examples of catecholate
siderophores include the albomycins, agrobactin, parabactin,
enterobactin, and the like.
[0267] Examples of hydroxamic acid-based
siderophores include ferrichrome, ferricrocin, the albomycins,
ferrioxamines, rhodotorulic acid, and the like. Reference may be had to
Microbial Iron Chelators as Drug Delivery Agents by M. J. Miller et
al., Acc. Chem. Res. 1993, vol 26, pp 241-249; Structure of
Des(diserylglycyl)ferrirhodin, DDF, a Novel Siderophore from
Aspergillus ochraceous by M. A. F. Jalal et al. , J. Org. Chem. 1985,
vol 50, pp 5642-5645; Synthesis and Solution Structure of Microbial
Siderophores by R. J. Bergeron, Chem. Rev. 1984, vol 84, pp 587-602;
and Coordination Chemistry and Microbial Iron Transport by K. N.
Raymond, Acc. Chem. Res., 1979, vol 12, pp 183-190. The synthesis of a
retrohydroxamate analog of ferrichrome is described by R. K. Olsen et
al. in J. Org. Chem. 1985, vol 50, pp 2264-2271.
[0268] In "Total Synthesis of Desferrisalmycin" (M.
J. Miller et al. in J. Am. Chem. Soc. 2002, vol 124 pp 15001-15005), a
natural product is synthesized that contains a siderophore. The author
states "siderophores are functionally defined as low molecular mass
molecules which acquire iron (III) from the environment and transport
it into microganisms. Because of the significant roles they play in the
active transport of physiologically essentially iron (III) through
microbe cell members, it is not surprising that siderophores-drug
conjugates are attracting more and more attention from both medicinal
chemists and clinical researchers as novel drug delivery systems in the
war against microbial infections, especially in an area of widespread
emergency of multidrug-resistance (MDR) strains. There have been three
families of compounds identified as natural siderophore-drug
conjugates, including ferrimycin, albomycin, and salmycin." In a
related paper, Miller describes the use of siderophores as drug
delivery agents (Acc. Chem. Res. 1993, vol 26, pp 241-249. Presumably,
the siderophore acts as a "sequestering agents [to] facilitate the
active transport of chelated iron into cells where, by modification,
reduction, or siderophore decomposition, it is released for use by the
cell." Miller describes the process of tethering a drug to a sidrophore
to promote the active transport of the drug across the cell membrane.
[0269] In "The Preparation of a Fully
Differentiated `Multiwarhead` Sidrophore Precursor", by M. J. Miller et
al (J. Org. Chem. 2003, vol 68, pp 191-194) a precursor is disclosed
which allows for a drug to be tethered to a sidrophore. In one
embodiment, the route disclosed by Miller is employed to provide a
variety of siderophores of similar structure. The synthesis of similar
hydroxamic acid-based siderophores is discussed in J. Org. Chem. 2000,
vol 65 (Total Synthesis of the Siderophore Danoxamine by M. J. Miller
et al.), pp 4833-4838 and in the J. of Med. Chem. 1991, vol 32, pp
968-978 (by M. J. Miller et al.).
[0270] A variety of fluorescent labels have been
attached to ferrichrome analogues in "Modular Fluorescent-Labeled
Siderophore Analogues" by A. Shanzer et al. in J. Med. Chem. 1998, vol
41, 1671-1678. The authors have developed a general methodology for
such attachments.
[0271] As discussed above, functionalized
ferrichrome analogs have been previous generated, usually using basic
amine acids (glycine). In one embodiment, functionality is introduced
using an alternative amine acid (such as serine) in place of the
central glycine residue. This provides a functional group foothold from
which to base a wide variety of analogs. Using traditional synthetic
techniques, various linkers are utilized so as to increase or decrease
the distance between the magnetic carrier and the drug.
[0272] As would be apparent to one of ordinary
skill in the art, the above specified techniques are widely applicable
to a variety of substrates. By way of illustration, and not limitation,
a number of magnetic taxanes are shown below. Nitroxides
[0273] Another class of magnetic carriers is the
nitroxyl radicals (also known as nitroxides). Nitroxyl radicals a
"persistent" radials that are unusually stable. A wide variety of
nitroxyls are commercially available. Their paramagnetic nature allows
them to be used as spin labels and spin probes.
[0274] In addition to the commercially available
nitroxyls, other paramagnetic radical labels have been generated by
acid catalyzed condensation with 2-Amino-2-methyl-1-propanol followed
by oxidation of the amine.
[0275] One of ordinary skill in the art could use
the teachings of this specification to generate a wide variety of
suitable carrier-drug complexes. The following table represents but a
small sampling of such compounds. TABLE-US-00003 R1 R2 R3 R4 F1, Y=CH2,
H Ac COPh n = 0 to 20 Ac F1, Y=CH2, Ac COPh n = 0 to 20 Ac H F1, Y=CH2,
COPh n = 0 to 20 Ac H Ac F1, Y=CH2, n = 0 to 20 H H Ac Boc F1, Y=CH2, H
Ac Boc n = 0 to 20 H F1, Y=CH2, Ac Boc n = 0 to 20 H H F1, Y=CH2, Boc n
= 0 to 20 H H Ac F1, Y=CH2, n = 0 to 20 F1, Y=NH or H Ac COPh NR, n = 0
to 20 Ac F1, Y=NH or Ac COPh NR, n = 0 to 20 Ac H F1, Y=NH or COPh NR,
n = 0 to 20 Ac H Ac F1, Y=NH or NR, n = 0 to 20 H H Ac Boc F1, Y=NH or
H Ac Boc NR, n = 0 to 20 H F1, Y=NH or Ac Boc NR, n = 0 to 20 H H F1,
Y=NH or Boc NR, n = 0 to 20 H H Ac F1, Y=NH or NR, n = 0 to 20 N1, n =
0 to 20 H Ac COPh Ac N1, n = 0 to 20 Ac COPh Ac H N1, n = 0 to 20 COPh
Ac H Ac N1, n = 0 to 20 H H Ac Boc N1, n = 0 to 20 H Ac Boc H N1, n = 0
to 20 Ac Boc H H N1, n = 0 to 20 Boc H H Ac N1, n = 0 to 20 N2, H Ac
COPh n = 0 to 20, X = O or NH Ac N2, n = 0 to 20, Ac COPh X = O or NH
Ac H N2, n = 0 to 20, COPh X = O or NH Ac H Ac N2, n = 0 to 20, X = O
or NH H H Ac Boc N2, H Ac Boc n = 0 to 20, X = O or NH H N2, n = 0 to
20, Ac Boc X = O or NH H H N2, n = 0 to 20, Boc X = O or NH H H Ac N2,
n = 0 to 20, X = O or NH N3, H Ac COPh n = 0 to 20, X = O or NH Ac N3,
n = 0 to 20, Ac COPh X = O or NH Ac H N3, n = 0 to 20, COPh X = O or NH
Ac H Ac N3, n = 0 to 20, X = O or NH H H Ac Boc N3, H Ac Boc n = 0 to
20, X = O or NH H N3, n = 0 to 20, Ac Boc X = O or NH H H N3, n = 0 to
20, Boc X = O or NH H H Ac N3, n = 0 to 20, X = O or NH F2 or F3 H Ac
COPh Ac F2 or F3 Ac COPh Ac H F2 or F3 COPh Ac H Ac F2 or F3 F2 or F3 H
Ac Boc H F2 or F3 Ac Boc H H F2 or F3 Boc H H Ac F2 or F3
[0276] The prior disclosure illustrates how one may
modify prior art taxanes to make them magnetic. As will be apparent to
those skilled in the art, one may similarly modify other modifiable
prior art anti-mitotic compounds to make them magnetic.
Other Modifiable Prior Art Compounds
[0277] Many anti-mitotic compounds that may be
modified in accordance with the process of this invention are described
in the prior art. One of these compounds is discodermolide; and it is
described in U.S. Pat. No. 6,541,509, the entire disclosure of which is
hereby incorporated by reference into this specification. Reference may
be had, e.g., to column 10 of such paent and to the references 10, 11,
12, and 13 cited in such patent.
[0278] The reference 12 in U.S. Pat. No. 6,541,509
is to an article by R. J. Kowalski et al., "The Microtubule-Stabilizing
Agent Discodermolide Competitively Inhibits the Binding of
Paclitaxel(Taxol) to Tubulin Monomers, . . . " Mol. Pharacol.
52:613-22, 1997. At page 2 of the Kowalski et al. patent, a formula for
discodermolide is presented with 29 numbered carbon atoms (see FIG. 1).
[0279] Elsewhere in this specification, applicants
teach how to make "magnetic taxanes" by incorporating therein various
linker groups and/or siderophores. The same linker groups and/or
siderphores may be utilized via subsgtantially the same process to make
the discodermolide magnetic in the same manner.
[0280] As is disclosed elsewhere in this
specification, siderphores are a class of compounds that act as
chelating agents for various metals. When used to make "magnetic
taxanes," they are preferably bound to either the C7 and/or the C10
carbons of the paclitaxels. They can similarly be used to make
"magnetic discodermolides," but in this latter case they should be
bonded at the C17 carbon of discodermolide, to which a hydroxyl group
is bound. The same linker that is used to link the C7/C10 carbon of the
taxane to the siderphore may also be sued to link the C17 carbon of the
discodermolde to the siderphore.
[0281] In one embodiment, the "siderohophoric
group" disclosed in United States patent 6,310,058, the entire
disclosure of which is hereby incorporated by reference into this
specification, is utilized. The siderophoric group is of the formula
--(CH2).sub.m--N(OH)--C(O)--(CH.sub.2)n -(CH.dbd.CH).sub.o--CH3,
wherein m is an integer of from 2 to 6, n is 0 or an integer of from 1
to 22, and o is 0 or an integer 1 to 4, provided that m+o is no greater
than 25.
[0282] In another embodiment, "magentic epothilone
A" and/or "magentic epotilone B" is also made by a similar process. As
is also disclosed in the FIG. 1 of the Kowalski et al. article (see
page 614), and in the formula depicted, the epothilone A exists when,
in such formula, the alkyl group ("R") is hydrogen, whereas the
epothilone B exists when, in such formula, the alkyl group is methyl.
In either case, one can make magnetic analogs of these compounds by
using the same siderophores and the same linkers groups but utilzing
them at a different site. One may bind such siderophores at either the
number 3 carbon (which which a hydroxyl group is bound) and/or the
number 7 carbon (to which another hydroxyl group is bound.).
[0283] Without wishing to be bound to any
particular theory, applicants believe that the binding of the
siderphores at the specified carbon sites imparts the required magnetic
properties to such modified materials without adversely affecting the
anti-mitotic properteis of the material. In fact, in some embodiment,
the anti-mitotic properties of the modified magnetic materials surpass
the anti-mitotic properties of the unmodified materials.
[0284] This is unexpected; for, if the same linker
groups and/or siderophores are used to bind to other than the specified
carbon atoms, materials with no or subtantially poorer anti-mitotic
properties are produced.
[0285] Thus, e.g., and referring to the magnetic
taxanes described elsewhere in this speficification (and also to FIG. 1
of the Kowalski et al. article), one should not link such siderphores
to to any carbons on the pendant aromatic rings. Thus, e.g., and
referring to the discodermolide structure, one shouldnot link
siderphores to any of 1, 2, 3, or 4 carbon atoms. Thus, e.g., and
referring to the epothilones, one should not link the siderphores to
any carbonon the ring structure containing sulfur and nitrogen.
[0286] By way of further illustration, and
referring to U.S. Pat. Nos. 5,504,074, 5,661,143, 5,892,069, 6,528,676,
and 6,723,858 (the entire disclosure of each of which is hereby
incorporated by reference into this specification), one may modify
estradiol and estradiol metabolites to make them magnetic in accordance
with the process of this invention. As is disclosed in U.S. Pat. No.
6,723,858 (the entire disclosure of which is hereby incorporated by
reference into this specification, "Cell mitosis is a multi-step
process that includes cell division and replication (Alberts, B. et al.
In The Cell, pp. 652-661 (1989); Stryer, E. Biochemistry (1988)).
Mitosis is characterized by the intracellular movement and segregation
of organelles, including mitotic spindles and chromosomes. Organelle
movement and segregation are facilitated by the polymerization of the
cell protein tubulin. Microtubules are formed from .alpha. and .beta.
tubulin polymerization and the hydrolysis of guanosine triphosphate
(GTP). Microtubule formation is important for cell mitosis, cell
locomotion, and the movement of highly specialized cell structures such
as cilia and flagella."
[0287] As is also disclosed in U.S. Pat. No.
6,723,858, "Microtubules are extremely labile structures that are
sensitive to a variety of chemically unrelated anti-mitotic drugs. For
example, colchicine and nocadazole are anti-mitotic drugs that bind
tubulin and inhibit tubulin polymerization (Stryer, E. Biochemistry
(1988)). When used Cell mitosis is a multi-step process that includes
cell division and replication (Alberts, B. et al. In The Cell, pp.
652-661 (1989); Stryer, E. Biochemistry (1988)). Mitosis is
characterized by the intracellular movement and segregation of
organelles, including mitotic spindles and chromosomes. Organelle
movement and segregation are facilitated by the polymerization of the
cell protein tubulin. Microtubules are formed from .alpha. and .beta.
tubulin polymerization and the hydrolysis of guanosine triphosphate
(GTP). Microtubule formation is important for cell mitosis, cell
locomotion, and the movement of highly specialized cell structures such
as cilia and flagella. Microtubules are extremely labile structures
that are sensitive to a variety of chemically unrelated anti-mitotic
drugs. For example, colchicine and nocadazole are anti-mitotic drugs
that bind tubulin and inhibit tubulin polymerization (Stryer, E.
Biochemistry (1988)). When used alone or in combination with other
therapeutic drugs, colchicine may be used to treat cancer
(WO-9303729-A, published Mar. 4, 1993; J 03240726-A, published Oct. 28,
1991), alter neuromuscular function, change blood pressure, increase
sensitivity to compounds affecting sympathetic neuron function, depress
respiration, and relieve gout (Physician's Desk Reference, Vol. 47,
p.1487, (1993))."
[0288] As is also disclosed in U.S. Pat. No.
6,723,858, "Estradiol and estradiol metabolites such as
2-methoxyestradiol have been reported to inhibit cell division
(Seegers, J. C. et al. J. Steroid Biochem. 32, 797-809 (1989);
Lottering, M-L. et al. Cancer Res. 52, 5926-5923(1992); Spicer, L. J.
and Hammond, J. M. Mol. and Cell. Endo. 64,119-126 (1989); Rao, P. N.
and Engelberg, J. Exp. Cell Res. 48, 71-81 (1967)). However, the
activity is variable and depends on a number of in vitro conditions.
For example, estradiol inhibits cell division and tubulin
polymerization in some in vitro settings (Spicer, L. J. and Hammond, J.
M. Mol. and Cell. Endo. 64, 119-126 (1989); Ravindra, R., J. Indian
Sci. 64 (c) (1983)), but not in others (Lottering, M-L. et al. Cancer
Res. 52, 5926-5923 (1992); Ravindra, R., J. Indian Sci. 64 (c) (1983)).
Estradiol metabolites such as 2-methoxyestradiol will inhibit cell
division in selected in vitro settings depending on whether the cell
culture additive phenol red is present and to what extent cells have
been exposed to estrogen. (Seegers, J. C. et al. Joint NCI-IST
Symposium. Biology and Therapy of Breast Cancer. Sep. 25, Sep. 27,
1989, Genoa, Italy, Abstract A 58). alone or in combination with other
therapeutic drugs, colchicine may be used to treat cancer
(WO-09303729-A, published Mar. 4, 1993; J 03240726-A, published Oct.
28, 1991), alter neuromuscular function, change blood pressure,
increase sensitivity to compounds affecting sympathetic neuron
function, depress respiration, and relieve gout (Physician's Desk
Reference, Vol. 47, p. 1487, (1993)).
[0289] As is also disclosed in U.S. Pat. No.
6,723,858, estradiol and estradiol metabolites such as
2-methoxyestradiol have been reported to inhibit cell division
(Seegers, J. C. et al. J. Steroid Biochem. 32, 797-809 (1989);
Lottering, M-L. et al. Cancer Res. 52, 5926-5923(1992); Spicer, L. J.
and Hammond, J. M. Mol. and Cell. Endo. 64, 119-126 (1989); Rao, P. N.
and Engelberg, J. Exp. Cell Res. 48, 71-81 (1967)). However, the
activity is variable and depends on a number of in vitro conditions.
For example, estradiol inhibits cell division and tubulin
polymerization in some in vitro settings (Spicer, L. J. and Hammond, J.
M. Mol. and Cell. Endo. 64, 119-126 (1989); Ravindra, R., J. Indian
Sci. 64 (c) (1983)), but not in others (Lottering, M-L. et al. Cancer
Res. 52, 5926-5923 (1992); Ravindra, R., J. Indian Sci. 64 (c) (1983)).
Estradiol metabolites such as 2-methoxyestradiol will inhibit cell
division in selected in vitro settings depending on whether the cell
culture additive phenol red is present and to what extent cells have
been exposed to estrogen. (Seegers, J. C. et al. Joint NCI-IST
Symposium. Biology and Therapy of Breast Cancer. Sep. 25, Sep. 27,
1989, Genoa, Italy, Abstract A 58).
[0290] In one preferred embodiment; the modifiable
anti-mitotic agent is an anti-microtubule agent. In one aspect of this
embodiment, and referring to U.S. Pat. No. 6,689,803 at columns 5-6
thereof (the entire disclosure of which patent is hereby incorporated
by reference into this specification), representative anti-microtubule
agents include, e.g., " . . . taxanes (e.g., paclitaxel and docetaxel),
campothecin, eleutherobin, sarcodictyins, epothilones A and B,
discodermolide, deuterium oxide (D.sub.2O), hexylene glycol
(2-methyl-2,4-pentanediol), tubercidin (7-deazaadenosine), LY290181
(2-amino-4-(3-pyridyl)-4H-naphtho(1,2-b)pyran-3-cardonitrile), aluminum
fluoride, ethylene glycol bis-(succinimidylsuccinate), glycine ethyl
ester, nocodazole, cytochalasin B, colchicine, colcemid,
podophyllotoxin, benomyl, oryzalin, majusculamide C, demecolcine,
methyl-2-benzimidazolecarbamate (MBC), LY195448, subtilisin, 1069C85,
steganacin, combretastatin, curacin, estradiol, 2-methoxyestradiol,
flavanol, rotenone, griseofulvin, vinca alkaloids, including
vinblastine and vincristine, maytansinoids and ansamitocins, rhizoxin,
phomopsin A, ustiloxins, dolastatin 10, dolastatin 15, halichondrins
and halistatins, spongistatins, cryptophycins, rhazinilam, betaine,
taurine, isethionate, HO-221, adociasulfate-2, estramustine, monoclonal
anti-idiotypic antibodies, microtubule assembly promoting protein
(taxol-like protein, TALP), cell swelling induced by hypotonic (190
mosmol/L) conditions, insulin (100 nmol/L) or glutamine (10 mmol/L),
dynein binding, gibberelin, XCHO1 (kinesin-like protein),
lysophosphatidic acid, lithium ion, plant cell wall components (e.g.,
poly-L-lysine and extensin), glycerol buffers, Triton X-100 microtubule
stabilizing buffer, microtubule associated proteins (e.g., MAP2, MAP4,
tau, big tau, ensconsin, elongation factor-1-alpha (EF-1.alpha.) and
E-MAP-115), cellular entities (e.g., histone H1, myelin basic protein
and kinetochores), endogenous microtubular structures (e.g., axonemal
structures, plugs and GTP caps), stable tubule only polypeptide (e.g.,
STOP145 and STOP220) and tension from mitotic forces, as well as any
analogues and derivatives of any of the above. Within other
embodiments, the anti-microtubule agent is formulated to further
comprise a polymer."
[0291] The term "anti-microtubule," as used in this
specification (and in the specification of U.S. Pat. No. 6,689,803),
refers to any " . . . protein, peptide, chemical, or other molecule
which impairs the function of microtubules, for example, through the
prevention or stabilization of polymerization. A wide variety of
methods may be utilized to determine the anti-microtubule activity of a
particular compound, including for example, assays described by Smith
et al. (Cancer Lett 79(2):213-219, 1994) and Mooberry et al., (Cancer
Lett. 96(2):261-266, 1995);" see, e.g., lines 13-21 of column 14 of
U.S. Pat. No. 6,689,803. One preferred method, utilizing the
anti-mitotic factor, is described in this specification.
[0292] An extensive listing of anti-microtubule
agents is provided in columns 14, 15, 16, and 17 of U.S. Pat. No.
6,689,803; and one or more of them may be modified them in accordance
with the process of this invention to make them magnetic. These
anti-microtubule agents include " . . . taxanes (e.g., paclitaxel
(discussed in more detail below) and docetaxel) (Schiff et al., Nature
277: 665-667, 1979; Long and Fairchild, Cancer Research 54: 4355-4361,
1994; Ringel and Horwitz, J. Natl. Cancer Inst. 83(4): 288-291, 1991;
Pazdur et al., Cancer Treat. Rev. 19(4): 351-386, 1993), campothecin,
eleutherobin (e.g., U.S. Pat. No. 5,473,057), sarcodictyins (including
sarcodictyin A), epothilones A and B (Bollag et al., Cancer Research
55: 2325-2333, 1995), discodermolide (ter Haar et al., Biochemistry 35:
243-250, 1996), deuterium oxide (D2O) (James and Lefebvre, Genetics
130(2): 305-314, 1992; Sollott et al., J. Clin. Invest. 95: 1869-1876,
1995), hexylene glycol (2-methyl-2,4-pentanediol) (Oka et al., Cell
Struct. Funct. 16(2): 125-134, 1991), tubercidin (7-deazaadenosine)
(Mooberry et al., Cancer Lett. 96(2): 261-266, 1995), LY290181
(2-amino-4-(3-pyridyl)-4H-naphtho(1,2-b)pyran-3-cardonitrile) (Panda et
al., J. Biol. Chem. 272(12): 7681-7687, 1997; Wood et al., Mol.
Pharmacol. 52(3): 437-444, 1997), aluminum fluoride (Song et al., J.
Cell. Sci. Suppl. 14:147-150, 1991), ethylene glycol
bis-(succinimidylsuccinate) (Caplow and Shanks, J. Biol. Chem. 265(15):
8935-8941, 1990), glycine ethyl ester (Mejillano et al., Biochemistry
31(13): 3478-3483, 1992), nocodazole (Ding et al., J. Exp. Med. 171(3):
715-727, 1990; Dotti et al., J. Cell Sci. Suppl. 15: 75-84, 1991; Oka
et al., Cell Struct. Funct. 16(2): 125-134, 1991; Weimer et al., J.
Cell. Biol. 136(1), 71-80, 1997), cytochalasin B (Illinger et al.,
Biol. Cell 73(2-3): 131-138, 1991), colchicine and CI 980 (Allen et
al., Am. J. Physiol. 261(4 Pt. 1): L315-L321, 1991; Ding et al., J.
Exp. Med. 171(3): 715-727, 1990; Gonzalez et al., Exp. Cell. Res.
192(1): 10-15, 1991; Stargell et al., Mol. Cell. Biol. 12(4):
1443-1450, 1992; Garcia et al., Antican. Drugs 6(4): 533-544, 1995),
colcemid (Barlow et al., Cell. Motil. Cytoskeleton 19(1): 9-17, 1991;
Meschini et al., J. Microsc. 176(Pt. 3): 204-210, 1994; Oka et al.,
Cell Struct. Funct. 16(2): 125-134, 1991), podophyllotoxin (Ding et
al., J. Exp. Med. 171(3): 715-727, 1990), benomyl (Hardwick et al., J.
Cell. Biol. 131(3): 709-720, 1995; Shero et al., Genes Dev. 5(4):
549-560, 1991), oryzalin (Stargell et al., Mol. Cell. Biol. 12(4):
1443-1450, 1992), majusculamide C (Moore, J. Ind. Microbiol. 16(2):
134-143, 1996), demecolcine (Van Dolah and Ramsdell, J. Cell. Physiol.
166(1): 49-56, 1996; Wiemer et al., J. Cell. Biol. 136(1): 71-80,
1997), methyl-2-benzimidazolecarbamate (MBC) (Brown et al., J. Cell.
Biol. 123(2): 387-403, 1993), LY195448 (Barlow & Cabral, Cell
Motil. Cytoskel. 19: 9-17, 1991), subtilisin (Saoudi et al., J. Cell
Sci. 108: 357-367, 1995), 1069C85 (Raynaud et al., Cancer Chemother.
Pharmacol. 35: 169-173, 1994), steganacin (Hamel, Med. Res. Rev. 16(2):
207-231, 1996), combretastatins (Hamel, Med. Res. Rev. 16(2): 207-231,
1996), curacins (Hamel, Med. Res. Rev. 16(2): 207-231, 1996), estradiol
(Aizu-Yokata et al., Carcinogen. 15(9): 1875-1879, 1994),
2-methoxyestradiol (Hamel, Med. Res. Rev. 16(2): 207-231, 1996),
flavanols (Hamel, Med. Res. Rev. 16(2): 207-231, 1996), rotenone
(Hamel, Med. Res. Rev. 16(2): 207-231, 1996), griseofulvin (Hamel, Med.
Res. Rev. 16(2): 207-231; 1996), vinca alkaloids, including vinblastine
and vincristine (Ding et al., J. Exp. Med. 171(3): 715-727, 1990; Dirk
et al., Neurochem. Res. 15(11): 1135-1139, 1990; Hamel, Med. Res. Rev.
16(2): 207-231, 1996; Illinger et al., Biol. Cell 73(2-3): 131-138,
1991; Wiemer et al., J. Cell. Biol. 136(1): 71-80, 1997), maytansinoids
and ansamitocins (Hamel, Med. Res. Rev. 16(2): 207-231, 1996), rhizoxin
(Hamel, Med. Res. Rev. 16(2): 207-231, 1996), phomopsin A (Hamel, Med.
Res. Rev. 16(2): 207-231, 1996), ustiloxins (Hamel, Med. Res. Rev.
16(2): 207-231, 1996), dolastatin 10 (Hamel, Med Res. Rev. 16(2):
207-231, 1996), dolastatin 15 (Hamel, Med. Res. Rev. 16(2): 207-231,
1996), halichondrins and halistatins (Hamel, Med. Res. Rev. 16(2):
207-231, 1996), spongistatins (Hamel, Med. Res. Rev. 16(2): 207-231,
1996), cryptophycins (Hamel, Med. Res. Rev. 16(2): 207-231, 1996),
rhazinilam (Hamel, Med. Res. Rev. 16(2): 207-231, 1996), betaine
(Hashimoto et al., Zool. Sci. 1: 195-204, 1984), taurine (Hashimoto et
al., Zool. Sci. 1: 195-204, 1984), isethionate (Hashimoto et al., Zool.
Sci. 1: 195-204, 1984), HO-221 (Ando et al., Cancer Chemother.
Pharmacol. 37: 63-69, 1995), adociasulfate-2 (Sakowicz et al., Science
280: 292-295, 1998), estramustine (Panda et al., Proc. Natl. Acad. Sci.
USA 94:10560-10564, 1997), monoclonal anti-idiotypic antibodies (Leu et
al., Proc. Natl. Acad. Sci. USA 91(22): 10690-10694, 1994), microtubule
assembly promoting protein (taxol-like protein, TALP) (Hwang et al.,
Biochem. Biophys. Res. Commun. 208(3): 1174-1180, 1995), cell swelling
induced by hypotonic (190 mosmol/L) conditions, insulin (100 nmol/L) or
glutamine (10 mmol/L) (Haussinger et al., Biochem. Cell. Biol. 72(1-2):
12-19, 1994), dynein binding (Ohba et al., Biochim. Biophys. Acta
1158(3): 323-332, 1993), gibberelin (Mita and Shibaoka, Protoplasma
119(1/2): 100-109, 1984), XCHO1 kinesin-like protein) (Yonetani et al.,
Mol. Biol. Cell 7(suppl): 211A, 1996), lysophosphatidic acid (Cook et
al., Mol. Biol. Cell 6(suppl): 260A, 1995), lithium ion (Bhattacharyya
and Wolff, Biochem. Biophys. Res. Commun. 73(2): 383-390, 1976), plant
cell wall components (e.g., poly-L-lysine and extensin) (Akashi et al.,
Planta 182(3): 363-369, 1990), glycerol buffers (Schilstra et al.,
Biochem. J. 277(Pt. 3): 839-847, 1991; Farrell and Keates, Biochem.
Cell. Biol. 68(11): 1256-1261, 1990; Lopez et al., J. Cell. Biochem.
43(3): 281-291, 1990), Triton X-100 microtubule stabilizing buffer
(Brown et al., J. Cell Sci. 104(Pt. 2): 339-352, 1993; Safiejko-Mroczka
and Bell, J. Histochem. Cytochem. 44(6): 641-656, 1996), microtubule
associated proteins (e.g., MAP2, MAP4, tau, big tau, ensconsin,
elongation factor-1 -alpha EF-1.alpha.) and E-MAP-115) (Burgess et al.,
Cell Motil. Cytoskeleton 20(4): 289-300, 1991; Saoudi et al., J. Cell.
Sci. 108(Pt. 1): 357-367, 1995; Bulinski and Bossler, J. Cell. Sci.
107(Pt. 10): 2839-2849, 1994; Ookata et al., J. Cell Biol. 128(5):
849-862, 1995; Boyne et al., J. Comp. Neurol. 358(2): 279-293, 1995;
Ferreira and Caceres, J. Neurosci. 11(2): 392400, 1991; Thurston et
al., Chromosoma 105(1): 20-30, 1996; Wang et al., Brain Res. Mol. Brain
Res. 38(2): 200-208, 1996; Moore and Cyr, Mol. Biol. Cell 7(suppl):
221-A, 1996; Masson and Kreis, J. Cell Biol. 123(2), 357-371, 1993),
cellular entities (e.g. histone H1, myelin basic protein and
kinetochores) (Saoudi et al., J. Cell. Sci. 108(Pt. 1): 357-367, 1995;
Simerly et al., J. Cell Biol. 111(4): 1491-1504, 1990), endogenous
microtubular structures (e.g., axonemal structures, plugs and GTP caps)
(Dye et al., Cell Motil. Cytoskeleton 21(3): 171-186, 1992; Azhar and
Murphy, Cell Motil. Cytoskeleton 15(3): 156-161, 1990; Walker et al.,
J. Cell Biol. 114(1): 73-81, 1991; Drechsel and Kirschner, Curr. Biol.
4(12): 1053-1061, 1994), stable tubule only polypeptide (e.g., STOP145
and STOP220) (Pirollet et al., Biochim. Biophys. Acta 1160(1): 113-119,
1992; Pirollet et al., Biochemistry 31(37): 8849-8855, 1992; Bosc et
al., Proc. Natl. Acad. Sci. USA 93(5): 2125-2130, 1996; Margolis et
al., EMBO J. 9(12): 4095-4102, 1990) and tension from mitotic forces
(Nicklas and Ward, J. Cell Biol. 126(5): 1241-1253, 1994), as well as
any analogues and derivatives of any of the above. Such compounds can
act by either depolymerizing microtubules (e.g., colchicine and
vinblastine), or by stabilizing microtubule formation (e.g.,
paclitaxel)."
[0293] U.S. Pat. No. 6,689,803 also discloses (at
columns 16 and 17 that, "Within one preferred embodiment of the
invention, the anti-mitotic compound is paclitaxel, a compound which
disrupts microtubule-formation by binding to tubulin to form abnormal
mitotic spindles. Briefly, paclitaxel is a highly derivatized
diterpenoid (Wani et al., J. Am. Chem. Soc. 93:2325, 1971) which has
been obtained from the harvested and dried bark of Taxus brevifolia
(Pacific Yew) and Taxomyces Andreanae and Endophytic Fungus of the
Pacific Yew (Stierle et al., Science 60:214-216,-1993). "Paclitaxel"
(which should be understood herein to include prodrugs, analogues and
derivatives such as, for example, TAXOL.RTM., TAXOTERE.RTM., Docetaxel,
10-desacetyl analogues of paclitaxel and 3'N-desbenzoyl-3'N-t-butoxy
carbonyl analogues of paclitaxel) may be readily prepared utilizing
techniques known to those skilled in the art (see e.g., Schiff et al.,
Nature 277:665-667, 1979; Long and Fairchild, Cancer Research
54:4355-4361, 1994; Ringel and Horwitz, J. Natl. Cancer Inst.
83(4):288-291, 1991; Pazdur et al., Cancer Treat. Rev. 19(4):351 -386,
1993; WO9407882; WO9407881; WO9407880; WO9407876; WO9323555; WO9310076;
WO94/00156; WO9324476; EP590267; WO9420089; U.S. Pat. Nos. 5,294,637;
5,283,253; 5,279,949; 5,274,137; 5,202,448; 5,200,534; 5,229,529;
5,254,580; 5,412,092; 5,395,850; 5,380,751; 5,350,866; 4,857,653;
5,272,171; 5,411,984; 5,248,796; 5,248,796; 5,422,364; 5,300,638;
5,294,637; 5,362,831; 5,440,056; 4,814,470; 5,278,324; 5,352,805;
5,411,984; 5,059,699; 4,942,184; Tetrahedron Letters 35(52):9709-9712,
1994; J. Med. Chem. 35:4230-4237, 1992; J. Med. Chem. 34:992-998, 1991;
J. Natural Prod. 57(10):1404-1410, 1994; J. Natural Prod.
57(11):1580-1583, 1994; J. Am. Chem. Soc. 110:6558-6560, 1988), or
obtained from a variety of commercial sources, including for example,
Sigma Chemical Co., St. Louis, Mo. (T7402--from Taxus brevifolia)."
[0294] As is also disclosed in U.S. Pat. No.
6,689,893, "Representative examples of such paclitaxel derivatives or
analogues include 7-deoxy-docetaxol, 7,8-cyclopropataxanes,
N-substituted 2-azetidones, 6,7-epoxy paclitaxels, 6,7-modified
paclitaxels, 10-desacetoxytaxol, 10-deacetyltaxol (from
10-deacetylbaccatin III), phosphonooxy and carbonate derivatives of
taxol, taxol 2',7-di(sodium 1,2-benzenedicarboxylate,
10-desacetoxy-11,12-dihydrotaxol-10,12(18)-diene derivatives,
10-desacetoxytaxol, Protaxol(2'- and/or 7-O-ester derivatives), (2'-
and/or 7-O-carbonate derivatives), asymmetric synthesis of taxol side
chain, fluoro taxols, 9-deoxotaxane, (13-acetyl-9-deoxobaccatine III,
9-deoxotaxol, 7-deoxy-9-deoxotaxol, 10-desacetoxy-7-deoxy-9-deoxotaxol,
Derivatives containing hydrogen or acetyl group and a hydroxy and
tert-butoxycarbonylamino, sulfonated 2'-acryloyltaxol and sulfonated
2'-O-acyl acid taxol derivatives, succinyltaxol,
2'-.gamma.-aminobutyryltaxol formate, 2'-acetyl taxol, 7-acetyl taxol,
7-glycine carbamate taxol, 2'-OH-7-PEG(5000)carbamate taxol, 2'-benzoyl
and 2',7-dibenzoyl taxol derivatives, other prodrugs (2'-acetyl taxol;
2',7-diacetyltaxol; 2'succinyltaxol; 2'-(beta-alanyl)-taxol);
2'gamma-aminobutyryltaxol formate; ethylene glycol derivatives of
2'-succinyltaxol; 2'-glutaryltaxol; 2'-(N,N-dimethylglycyl)taxol;
2'-(2-(N,N-dimethylamino)propionyl)taxol; 2'orthocarboxybenzoyl taxol;
2'aliphatic carboxylic acid derivatives of taxol, Prodrugs
{2'(N,N-diethylaminopropionyl)taxol, 2'(N,N-dimethylglycyl)taxol,
7(N,N-dimethylglycyl)taxol, 2',7-di-(N,N-dimethylglycyl)taxol,
7(N,N-diethylaminopropionyl)taxol,
2',7-di(N,N-diethylaminopropionyl)taxol, 2'-(L-glycyl)taxol,
7-(L-glycyl)taxol, 2',7-di(L-glycyl)taxol, 2'-(L-alanyl)taxol,
7-(L-alanyl)taxol, 2',7-di(L-alanyl)taxol, 2'-(L-leucyl)taxol,
7-(L-leucyl)taxol, 2',7-di(L-leucyl)taxol, 2'-(L-isoleucyl)taxol,
7-(L-isoleucyl)taxol, 2',7-di(L-isoleucyl)taxol, 2'-(L-valyl)taxol,
7-(L-valyl)taxol, 2'7-di(L-valyl)taxol, 2'-(L-phenylalanyl)taxol,
7-(L-phenylalanyl)taxol, 2',7-di(L-phenylalanyl)taxol,
2'-(L-prolyl)taxol, 7-(L-prolyl)taxol, 2',7-di(L-prolyl)taxol,
2'-(L-lysyl)taxol, 7-(L-lysyl)taxol, 2',7-di(L-lysyl)taxol,
2'-(L-glutamyl)taxol, 7-(L-glutamyl)taxol, 2',7-di(L-glutamyl)taxol,
2'-(L-arginyl)taxol, 7-(L-arginyl)taxol, 2',7-di(L-arginyl)taxol},
Taxol analogs with modified phenylisoserine side chains, taxotere,
(N-debenzoyl-N-tert-(butoxycaronyl)-10-deacetyltaxol, and taxanes
(e.g., baccatin III, cephalomannine, 10-deacetylbaccatin III,
brevifoliol, yunantaxusin and taxusin)."
[0295] By way of yet further illustration, one may
use one or more of the anti-mitotic agents disclosed in U.S. Pat. No.
6,673,937 (syntheses and methods of use of new antimitotic agents),
U.S. Pat. No. 6,624,317 (taxoid conjugates as antimitotoic and
antitumor agents), U.S. Pat. No. 6,593,334 (camptothecin-taxoid
conjugates as antimitotic and antitumor agents), U.S. Pat. No.
6,593,321 (2-alkoxyestradiiol analogs with antiproliferative and
antimitotic activity), U.S. Pat. No. 6,569,870 (fluorinated quinolones
as antimitotic and antitumor agent), U.S. Pat. No. 6,528,489 (mycotoxin
derivatives as antimitotic agents), 6,392,055 (synthesis and biological
evaluation of analogs of the antimitotic marine natural product curacin
A), U.S. Pat. No. 6,127,377 (vinka alkaloid antimitotic halogenated
derivatives), U.S. Pat. No. 5,695,950 (method of screening for
antimitotic compounds using the cdc25 tyrosine phosphatase), U.S. Pat.
No. 5,620,985 (antimitotic binary alkaloid derivatives from
catharanthus roseus), U.S. Pat. No. 5,294,538 (method of screening for
antimitotic compounds using the CDC tyrosine phosphatase), and the
like. The entire disclosure of each of these United States patents is
hereby incorporated by reference into this specification.
[0296] As will be apparent, one or more of the
aforementioned anti-mitotic and/or anti-microtubule agents may be
modified to make them magnetic in accordance with this invention.
Synergistic Combinations of Magnetic Anti-Mitotic
Agents
[0297] In one embodiment of this invention,
discussed elsewhere in this specification, a synergistic combination of
the magnetic anti-mititoic compound of this invention and paclitaxel is
described. In the embodiment of the invention described in this section
of the specification, a synergitic combination of two or more
anti-mititoic compounds is described.
[0298] In one embodiment, the first anti-mitotic
compound is preferably a magentic taxane such as, e.g., magentic
paclitaxel and/ormagnetic docetaxel. In this embodiment, the second
anti-mitotic compound may be magnetic discdermolide, and/or magnetic
epothilone A, and/or magentic epothilone B, and/or mixtures thereof.
Other suitable combinations of magnetic anti-mitotic agents will be
apparent.
Properties of the Preferred Anti-Mitotic Compounds
[0299] In one preferred embodiment, the compound of
this invention has a mitotic index factor of at least about 10 percent
and, more preferably, at least about 20 percent. In one aspect of this
embodiment, the mitotic index factor is at least about 30 percent. In
another embodiment, the mitotic index factor is at least about 50
percent.
[0300] In another embodiment of the invention, the
compound of this invention has a mitotic index factor of less than
about 5 percent.
[0301] As is known to those skilled in the art, the
mitotic index is a measure of the extent of mitosis. Reference may be
had, e.g., to U.S. Pat. No. 5,262,409 (binary tumor therapy), U.S. Pat.
No. 5,443,962 (methods of indentifying inhibitors of cdc25
phosphatase), U.S. Pat. No. 5,744,300 (methods and reagents for the
indentificatioin and regulation of senescence-related genes), U.S. Pat.
Nos. 6,613,318, 6,251,585 (assay and reagents for indentifying
anti-proliferative agents), U.S. Pat. No. 6,252,058 (sequences for
targeting metastatic cells), U.S. Pat. No. 6,387,642 (method for
indentifying a reagent that modulates Myt1 activity), U.S. Pat. No.
6,413,735 (method of screening for a modulator of angiogenesis), U.S.
Pat. No. 6,531,479 (anti-cancer compounds), U.S. Pat. No. 6,599,694
(method of characterizing potential therapeutics by determining
cell-cell interactions), U.S. Pat. No. 6,620,403 (in vivo
chemosensitivity screen for human tumors), U.S. Pat. No. 6,699,854
(anti-cancer compounds), U.S. Pat. No. 6,743,576 (database system for
predictive cellular bioinformatics), and the like. The entire
disclosure of each of these United States patents is hereby
incorporated by reference into this specification.
[0302] Reference may also be had, e.g., to U.S.
Pat. No. 5,262,409, which discloses that: "Determination of mitotic
index: For testing mitotic blockage with nocodazole and taxol, cells
were grown a minimum of 16 hours on polylysinecoated glass coverslips
before drug treatment. Cells were fixed at intervals, stained with
antibodies to detect lamin B, and counterstained with propidium iodide
to assay chromosome condensation. To test cell cycle blocks in
interphase, cells were synchronized in mitosis by addition of
nocodazole (Sigma Chemical Co.) to a final concentration of 0.05
.mu.g/ml from a 1 mg/ml stock in dimethylsulfoxide. After 12 hours
arrest, the mitotic subpopulation was isolated by shakeoff from the
culture plate. After applying cell cycle blocking drugs and/or 2-AP,
cells were fixed at intervals, prepared for indirect immunofluorescence
with anti-tubulin antibodies, and counterstained with propidium iodide.
All data timepoints represent averages of three counts of greater than
150 cells each. Standard deviation was never more than 1.5% on the
ordinate scale."
[0303] Reference may be had, e.g., to U.S. Pat. No.
6,413,735 which discloses that: "The mitotic index is determined
according to procedures standard in the art. Keram et al., Cancer
Genet. Cytogenet. 55:235 (1991). Harvested cells are fixed in
methanol:acetic acid (3:1, v:v), counted, and resuspended at 106
cells/ml in fixative. Ten microliters of this suspension is placed on a
slide, dried, and treated with Giemsa stain. The cells in metaphase are
counted under a light microscope, and the mitotic index is calculated
by dividing the number of metaphase cells by the total number of cells
on the slide. Statistical analysis of comparisons of mitotic indices is
performed using the 2-sided paired t-test."
[0304] By means of yet further illustration, one
may measure the mitotic index by means of the procedures described in,
e.g., articles by Keila Torres et al. ("Mechanisms of Taxol-Induced
Cell Death are Concentration Dependent," Cancer Research 58, 3620-3626,
Aug. 15, 1998), and Jie-Gung Chen et al. ("Differential Mitosis
Responses to Microtubule-stabilizing and destablilizng Drugs," Cancer
Research 62, 1935-1938, Apr. 1, 2002).
[0305] The mitotic index is preferably measured by
using the well-known HeLa cell lines. As is known to those skilled in
the art, HeLa cells are cells that have been derived from a human
carcinoma of the cervix from a patient named Henrietta Lack; the cells
have been maintained in tissued culture since 1953.
[0306] Hela cells are described, e.g., in U.S. Pat.
No. 5,811,282 (cell lines useful for detection of human
immunodeficiency virus), U.S. Pat. No. 5,376,525 (method for the
detectioin of mycoplasma), U.S. Pat. Nos. 6,143,512, 6,326,196,
6,365,394 (cell lines and constructs useful in production of E-1
deleted adenoviruses), U.S. Pat. No. 6,440,658 (assay method for
determining effect on aenovirus infection of Hela cells), U.S. Pat. No.
6,461,809 (method of improving inflectivity of cells for viruses), U.S.
Pat. Nos. 6,596,535, 6,605,426, 6,610,493 (screening compounds for the
ability to alter the production of amyloid-beta-peptide), U.S. Pat. No.
6,699,851 (cytotoxic compounds and their use), and the like; the entire
disclosure of each of these United States patents is hereby
incorporated by reference into this specification. By way of
illustration, U.S. Pat. No. 6,440,658 discloses that, for the
experiments described in such patent, "The HeLa cell line was obtained
from the American Type Culture Collection, Manassas Va."
[0307] In one preferred embodiment, the mitotic
index of a "control cell line" (i.e., one that omits that drug to be
tested) and of a cell line that includes 50 nanomoles of such drug per
liter of the cell line are determined and compared. The "mitotic index
factor" is equal to (Mt-Mc/Mc).times.100, wherein Mc is the mitotic
index of the "control cell line," and Mt is the mitotic index of the
cell line that includes the drug to be tested.
[0308] The compound of this invention preferably
has a molecular weight of at least about 150 grams per mole. In one
embodiment, the molecular weight of such compound is at least 300 grams
per mole. In another embodiment, the molecular weight of such compound
is 400 grams per mole. In yet another embodiment, the molecular weight
of such compound is at least about 550 grams per mole. In yet another
embodiment, the molecular weight of such compound is at least about
1,000 grams per mole. In yet another embodiment, the molecular weight
of such compound is at least 1,200 grams per mole.
[0309] The compound of this invention preferably
has a positive magnetic susceptibility of at least
1,000.times.10.sup.-6 centimeter-gram-seconds (cgs). As is known to
those skilled in the art, magnetic susceptibility is the ratio of the
magnetization of a material to the magnetic filed strength. Reference
may be had, e.g., to U.S. Pat. No. 3,614,618 (magnetic susceptibility
tester), U.S. Pat. No. 3,644,823 (nulling coil apparatus for magnetic
susceptibility logging), U.S. Pat. No. 3,657,636 (thermally stable coil
assembly for magnetic susceptibility logging), U.S. Pat. No. 3,665,297
(apparatus for determining magnetic susceptibility in a controlled
chemical and thermal environment), U.S. Pat. No. 3,758,847 (method and
system with voltage cancellation for measuring the magnetic
susceptibility of a subsurface earth formation), U.S. Pat. No.
3,758,848 (magnetic susceptibility well logging system), U.S. Pat. No.
3,879,658 (apparatus for measuring magnetic susceptibility), U.S. Pat.
No. 3,890,563 (magnetic susceptibility logging apparatus for
distinguishing ferromagnetic materials), U.S. Pat. No. 3,980,076
(method for measuring externally of the human body magnetic
susceptibility changes), U.S. Pat. No. 4,079,730 (apparatus for
measuring externally of the human body magnetic susceptibility
changes), U.S. Pat. No. 4,277,750 (induction probe for the measurement
of magnetic susceptibility), U.S. Pat. No. 4,359,399 (taggands with
induced magnetic susceptibility), U.S. Pat. No. 4,507,613 (method for
identifying non-magnetic minerals in earth formations utilizing
magnetic susceptibility measurements), U.S. Pat. No. 4,662,359 (use of
magnetic susceptibility probes in the treatment of cancer), U.S. Pat.
No. 4,701,712 (thermoregulated magnetic susceptibility sensor
assembly), U.S. Pat. No. 5,233,992 (MRI method for high liver iron
measurement using magnetic susceptibility induced field distortions),
U.S. Pat. No. 6,208,884 (noninvasive room temperature instrument to
measure magnetic susceptibility variations in body tissue), U.S. Pat.
No. 6,321,105 (contrast agents with high magnetic susceptibility), U.S.
Pat. No. 6,477,398 (resonant magnetic susceptibility imaging), and the
like. The entire disclosure of each of these United States patent
applications is hereby incorporated by reference into this
specification.
[0310] In one embodiment, the compound of this
invention has a positive magnetic susceptibility of at least
5,000.times.10.sup.-6 cgs. In another embodiment, such compound has a
positive magnetic susceptibility of at least 10,000.times.10.sup.-6
cgs.
[0311] The compound of this invention is preferably
comprised of at least 7 carbon atoms and, more preferably, at least
about 10 carbon atoms. In another embodiment, such compound is
comprised of at least 13 carbon atoms and at least one aromatic ring;
in one aspect of this embodiment, the compound has at least two
aromatic rings. In another embodiment, such compound is comprised of at
least 17 carbon atoms.
[0312] In one embodiment, the compound of this
invention is comprised of at least one oxetane ring. As is disclosed,
e.g., on page 863 of N. Iving Sax's "Hawley's Condensed Chemical
Dictionary," Eleventh Edition (Van Nostrand Reinhold Company, New York,
N.Y., 1987), the oxetane group, also known as "trimethylene oxide), is
identified by chemical abstract number CAS: 503-30-0. The oxetane group
present in the preferred compound preferably is unsubstituted. In one
embodiment, however, one ore more of the ring carbon atoms (either
carbon number one, or carbon number two, or carbon number 3), has one
or more of its hydrogen atoms substituted by a halogen group (such as
chlorine), a lower alkyl group of from 1 to 4 carbon atoms, a lower
haloalkyl group of from 1 to 4 carbon atoms, a cyanide group (CN), a
hydroxyl group, a carboxyl group, an amino group (wich can be primary,
secondary, or teriarary and may also contain from 0 to 6 carbon atoms),
a substituted hydroxyl group (such as, e.g., an ether group containing
from 1 to 6 carbon atoms), and the like. In one aspect of this
embodiment, the substituted oxetane group is 3,3-bis (chlormethyl)
oxetane.
[0313] In one embodiment, the compound of this
invention is comprised of from about 1 to 10 groups of the formula
--OB, in which B is selected from the group consisting of hydrogen,
alkyl of from about 1 to about 5 carbon atoms, and a moiety of the
formula R--(C.dbd.O)--O--, wherein R is selected from the group
consisting of hydrogen and alkyl of from about 1 to about 6 cabon
atoms, and the carbon is bonded to the R moiety, to the double-bonded
oxygen, and to the single bonded oxygen, thereby forming what is
commonly known as an acetyl group. This acetyl group preferably is
linked to a ring structure that is unsaturated and preferably contains
from about 6 to about 10 carbon atoms.
[0314] In one embodiment, the compound is comprised
of two unsaturated ring structures linked by an amide structure, which
typically has an acyl group, --CONR.sub.1--, wherein R.sub.1 is
selected from the group consisting of hydrogen lower alkyl of from 1 to
about 6 carbon atoms. In one preferred embodiment, the N group is
bonded to both to the R.sub.1 group and also to radical that contains
at least about 20 carbon atoms and at least about 10 oxygen atoms.
[0315] In one embodiment, the compound of this
invention contains at least one saturated ring comprising from about 6
to about 10 carbon atoms. By way of illustration, the saturated ring
structures may be one or more cyclohexane rings, cyclopheptane rings,
cyclooctane rings, cylclononane rings, and/or cylcodecane rings. In one
preferred aspect of this embodiment, at least one saturated ring in the
compound is bonded to at least one quinine group. Referring to page 990
of the "Hawley's Condensed Chemical Dictionary" described elsewhere in
this specification, quinine is 1,4-benzoquinone and is identified as
"CAS: 106-51-4."
[0316] In one embodiment, the compound of this
invention may comprise a ring structure with one double bond or two
double bonds (as opposed to the three double bonds in the aromatic
structures). These ring structures may be a partially unsaturated
material selected from the group consisting of partially unsaturated
cyclohexane, partially unsaturated cyclopheptane, partially unsaturated
cyclooctane, partially unstaruated cyclononane, partially unsaturated
cyclodecane, and mixtures thereof.
[0317] The compound of this invention is also
preferably comprised of at least one inorganic atom with a positive
magnetic susceptibility of at least 200.times.10.sup.-6 cgs. Thus, and
referring to the "CRC Handbook of Chemistry and Physics," 63.sup.rd
Edition (CRC Press, Inc., Boca Raton, Fla., 1982-83), the magnetic
susceptibility of elements are described at pages E-118 to E-123.
Suitable inorganic (i.e., non-carbon containing) elements with a
positive magnetic susceptibility greater than about 200.times.10.sup.-6
Cgs include, e.g., cerium (+5,160.times.10.sup.-6 Cgs), cobalt
(+11,000.times.10.sup.-6 cgs), dysprosium (+89,600.times.10.sup.-6
cgs), europium (+34,000.times.10.sup.-6 cgs), gadolinium
(+755,000.times.10.sup.-6 cgs), iron (+13,600.times.10.sup.-6 cgs),
manganese (+529.times.10.sup.-6 cgs), palladium (+567.4.times.10.sup.-6
cgs), plutonium (+610.times.10.sup.-6 cgs), praseodymium
(+5010.times.10.sup.-6 cgs), samarium (+2230.times.10.sup.-6 cgs),
technetium (+250.times.10.sup.-6 cgs), thulium (+51,444.times.10.sup.-6
cgs), and the like. In one embodiment, the positive magnetic
susceptibility of such element is preferably greater than about
+500.times.10.sup.-6 cgs and, even more preferably, greater than about
+1,000.times.10.sup.-6 cgs.
[0318] In one preferred compound, the inorganic
atom is radioactive. As is known to those skilled in the art,
radioactivity is a phenomenon characterized by spontaneous
disintegration of atomic nuclei with emission of corpuscular or
electromagnetic radiation.
[0319] In another preferred embodiment, one or more
inorganic or organic atoms that do not have the specified degree of
magnetic suscpeptibility are radioactive. Thus, e.g., the radioactive
atom may be, .e.g, radioactive carbon, radioactive hydrogen (tritium),
radioactive phosphorus, radioactive sulfur, radioactive potassium, or
any other of the atoms that exist is radioactive isotope form.
[0320] One preferred class of atoms is the class of
radioactive nuclides. As is known to those skilled in the art,
radioactive nuclides are atoms disintegrate by emission of corpuscular
or electromagnetic radiatons. The rays most commonly emitted are alpha
or beta gamma rays. See, e.g., page F-109 of the aforementioned "CRC
Handbook of Chemistry and Physics."
[0321] Radioactive nuclides are well known and are
described, e.g., in U.S. Pat. No. 4,355,179 (radioactive nuclide
labeled propiophenone compounds), U.S. Pat. No. 4,625,118 (device for
the elution and metering of a radioactive nuclide), U.S. Pat. No.
5,672,876 (method and apparatus for measuring distribution of
radioactive nuclide in a subject), and U.S. Pat. No. 6,607,710
(bisphosphonic acid derivative and compound thereof labeled with
radioactive nuclide.). The entire disclosure of each of these United
States patents is hereby incorporated by reference into this
specification.
[0322] Referring again to the aforementioned "CRC
Handbook of Chemistry and Physics," and to pages and in particular to
pages B340-B378 thereof, it will be seen that the inorganic atom may
be, e.g., cobalt 53, cobalt 54, cobalt 55, cobalt 56, cobalt 57, cobalt
58, cobalt 59, cobalt 60, cobalt 61, cobalt 62, cobalt 63, gadolinium
146, iron 49, iron 51, iron 52, iron 53, iron 54, iron 57, iron 58,
iron 59, iron 60, iron 61, iron 62, manganese 50, praseodymium 135,
samarium 156, and the like.
[0323] The compound of this invention preferably
has a magnetic moment of at least about 0.5 Bohr magnetrons per
molecule and, more preferably, at least about 1.0 Bohr magnetrons per
molecule. In one embodiment, the compound has a magnetic moment of at
least about 2 Bohr magnetrons per molecule.
[0324] As is known to those skilled in the art, a
Bohr magnetron is the amount he/4(pi)mc, wherein he is Plank's
constant, e and m are the charge and mass of the electron, c is the
speed of light, and pi is equal to about 3.14567. Reference may be had,
e.g., to U.S. Pat. Nos. 4,687,331, 4,832,877, 4,849,107, 5,040,373
("(One Bohr magnetron is equal to 9.273.times.10-24 Joules/Tesla"),
U.S. Pat. Nos. 5,169,944, 5,323,227 (".mu.o is a constant known as the
Bohr magnetron at 9.274.times.10-21 erg/Gauss"), U.S. Pat. Nos.
5,352,979; 6,383,597; 6,725,668; 6,739,137 ("One Bohr magnetron .mu.B
is equal to 9.273.times.10-24 Joules/Tesla"), and the like. The entire
disclosure of each of these United States patents is hereby
incorporated by reference into this specification.
[0325] In one preferred embodiment, the magnetic
compound of this invention is water soluble. As is known to those
skilled in the art, solubility of one liquid or solid in another is the
mass of the substance cotnained in a solution which is in equilibrium
with an excess of the substance. Under such conditions, the solution is
said to be saturated. Reference may be had, e.g., to page F-95 of the
CRC "Handbook of Chemistry and Physics," 53.sup.rd Edition (The
Chemical Rubber Company, CRC Press Division, 18901 Cranwood Parkway,
Cleveland, Ohio, 44128, 1972-1973).
[0326] As used in this specification, the term
"water soluble" refers to a solubility of at least 10 micrograms per
milliliter and, more preferably, at least 100 micrograms per
milliliter; by way of comparison, the solubility of paclitaxel in water
is only about 0.4 micrograms per milliliter. One may determine water
solubulity by conventional means. Thus, e.g., one may mix 0.5 milliters
of water with the compound to be tested under ambient conditions, stir
for 18 hours under ambient conditions, filter the slurry thus produced
to remove the non-solubulized portion of the fitrand, and calculae how
much ofthe filtrand was solubilized. From this, one can determine the
number of micrograms that went into solution.
[0327] In one embodiment, the magnetic compound of
this invention has a water solubility of at least 500 micrograms per
milliliter, and more preferably at least 1,000 micrograms per
milliliter. In yet another embodiment, the magnetic compound of this
invention has a water solubility of at least 2500 micrograms per
milliliter. In yet another embodiment, the magnetic compound of this
invention has a water solubility of at least 5,000 micrograms per
milliliter. In yet another embodiment, the magnetic compound of this
invention has a water solubility of at least 10,000 micrograms per
milliliter.
[0328] In another embodiment, the magnetic compound
of this invention has a water solubility of less than about 10
micrograms per milliliter and, preferably, less than about 1.0
micrograms per milliliter.
[0329] Without wishing to be bound to any
particular theory, applicants believe that the presence of a
hydrophilic group in the compound of their invention helps render such
compound water-soluble. Thus, e.g., it is believed that the siderophore
group that is present in their preferred compounds aids in creating
such water-solubility. As is known to those skilled in the art, a
siderophe is one of a number of low molecular weight, iron-containing,
or iron binding organic compounds or groups. Siderophores have a storng
affinity for Fe.sup.3+ (which they chelate) and function in the
solubilization and transport of iron. Siderophores are classified as
belonging to either the phenol-catechol type (such as enterobactin and
agrobactin), or the hydroxyamic acid type (such as ferrichome and
mycobactin). Reference may be had, e.g., to page 442 of J. Stenesh's
"Dictionary of Biochemistry and Molecular Biology," Second Edition
(John Wiley & Sons, New York, N.Y., 1989).
[0330] In one preferred embodiment, the compound of
this invention is comprised of one or more siderophore groups bound to
a magnetic moiety (such as, e.g., an atom selected from the group
consisting of iron, cobalt, nickel, and mixtures thereof).
[0331] As will be apparent, the inclusion of other
hydrophilic groups into otherwise water-insoluble compounds is
contemplated. Thus, by way of illustration and not limitation, and in
place of or in addition to such siderophore group, one use hydrophilic
groups such as the siderophore group(s) described hereinabove, hydroxyl
groups, carboxyl groups, amino groups, organometallic ionic structures,
phosphate groups, and the like. In one preferred aspect of this
embodiment, the hydrophilic group utilized should preferably be
biologically inert.
[0332] In one embodiment, the magnetic compound of
this invention has an association rate with microtubules of at least
3,500,000/mole/second. The association rate may be determined in
accordance with the procedure described in an article by J. F. Diaz et
al., "Fast Kinetics of Taxol Binding to Microtubules," Journal of
Biological Chemistry, 278(10) 8407-8455. Reference also may be had,
e.g., to a paper by J. R. Strobe et al. appearing in the Journal of
Biological Chemistry, 275: 26265-26276 (2000). As is disclosed, e.g.,
in the Diaz et al. paper, "The kinetics of binding and dissociation of
Flutax-1 and Flutax-2 were measured by thechange of fluorescence
intensity using an SS-51 stopped flow device (High-Tech Scientific, UK)
equipped with a fluorescence detetion system, using an excitation
wavelenght of 492 and a 530-nmcut-off filter in the emission pathway.
Thefitting of the kinetic curves was done with a non-linear least
squares sfitting program based upon the Marquardt algorithm . . . where
pseudo-firt order conditions were used . . . ."
[0333] In another embodiment of the invention, the
magnetic compound of this invention has a dissociation rate with
microubules, as measured in accordance with the procedure desribed in
such Diaz et al. paper, of less than about 0.08/second, when measured
at a temperature of 37 degrees Celsius and under atmospheric
conditions. Thus, in this embodiment, the magnetic compound of this
invention binds more durably to microtubules than does paclitaxel,
which has a dissociation rate of at least 0.91/second.
[0334] In one embodiment, the dissociation rate of
the magnetic compound of this invention is less than 0.7/second and,
more preferably, less than 0.6/second.
[0335] In one embodiment of this invention, the
anti-mitotic compound of the invention has the specified degree of
water-solubility and of anti-mitotic activity but does not necessarily
possess one or more of the magnetic properties described hereinabove.
Other Magnetic Compounds
[0336] In another embodiment of this invention,
other compounds which are not necessarily anti-mitotic are made
magnetic by a process comparable to the process described in this
specification for making taxanes magnetic.
[0337] In this embodiment, it is preferred to make
"magnetic derivatives" of drugs and therapeutic agents. These
derivative compounds each preferably have a molecular weight of at
least 150 grams per mole, a positive magnetic susceptibility of at
least 1,000.times.10.sup.-6 cgs, and a magnetic moment of at least 0.5
bohr magnetrons, wherein said compound is comprised of at least 7
carbon atoms and at least one inorganic atom with a positive magnetic
susceptibility of at least 200.times.10.sup.-6 cgs.
[0338] Some of the preferred "precursors" used to
make these "derivative compounds" are described in the remainder of
this section of the specification.
[0339] The precursor materials may be either
proteinaceous or non-proteinaceous drugs, as they terms are defined in
U.S. Pat. No. 5,194,581, the entire disclosure of which is hereby
incorporated by reference into this specification. U.S. Pat. No.
5,194,581 discloses "The drugs with which can be incorporated in the
compositions of the invention include non-proteinaceous as well as
proteinaceous drugs. The term "non-proteinaceous drugs" encompasses
compounds which are classically referred to as drugs such as, for
example, mitomycin C, daunorubicin, vinblastine, AZT, and hormones.
Similar substances are within the skill of the art. The proteinaceous
drugs which can be incorporated in the compositions of the invention
include immunomodulators and other biological response modifiers. The
term "biological response modifiers" is meant to encompass substances
which are involved in modifying the immune response in such manner as
to enhance the particular desired therapeutic effect, for example, the
destruction of the tumor cells. Examples of immune response modifiers
include such compounds as lymphokines. Examples of lymphokines include
tumor necrosis factor, the interleukins, lymphotoxin, macrophage
activating factor, migration inhibition factor, colony stimulating
factor and the interferons. Interferons which can be incorporated into
the compositions of the invention include alpha-interferon,
beta-interferon, and gamma-interferon and their subtypes. In addition,
peptide or polysaccharide fragments derived from these proteinaceous
drugs, or independently, can also be incorporated. Also, encompassed by
the term "biological response modifiers" are substances generally
referred to as vaccines wherein a foreign substance, usually a
pathogenic organism or some fraction thereof, is used to modify the
host immune response with respect to the pathogen to which the vaccine
relates. Those of skill in the art will know, or can readily ascertain,
other substances which can act as proteinaceous drugs."
[0340] The precursor may be a lectin, as is
disclosed in U.S. Pat. No. 5,176,907, the entire disclosure of which is
hereby incorporated by reference into this specification. This United
States patent discloses "Lectins are proteins, usually isolated from
plant material, which bind to specific sugar moieties. Many lectins are
also able to agglutinate cells and stimulate lymphocytes. Other
therapeutic agents which can be used therapeutically with the
biodegradable compositions of the invention are known, or can be easily
ascertained, by those of ordinary skill in the art."
[0341] The precursor material may be an amorphous
water-soluble pharmaceutical agent, as is disclosed in U.S. Pat. No.
6,117,455, the entire disclosure of which is hereby incorporated by
reference into this specification. As is disclosed in the abstract of
this patent, there is provided "A sustained-release microcapsule
contains an amorphous water-soluble pharmaceutical agent having a
particle size of from 1 nm-10 .mu.m and a polymer. The microcapsule is
produced by dispersing, in an aqueous phase, a dispersion of from
0.001-90% (w/w) of an amorphous water-soluble pharmaceutical agent in a
solution of a polymer having a wt. avg. molecular weight of
2,000-800,000 in an organic solvent to prepare an s/o/w emulsion and
subjecting the emulsion to in-water drying."
[0342] In one embodiment, and referring to U.S.
Pat. No. 5,420,105 (the entire disclosure of which is hereby
incorporated by reference into this specification), the precursor
material is selected from the group consisting of an anti-cancer
anthracycline antibiotic, cis-platinum, methotrexate, vinblastine,
mitoxanthrone ARA-C, 6-mercaptopurine, 6-mercaptoguanosine, mytomycin C
and a steroid.
[0343] By way of further illustration, the
precursor material is selected from the group consisting of
antithrombogenic agents, antiplatelet agents, prostaglandins,
thrombolytic drugs, antiproliferative drugs, antirejection drugs,
antimicrobial drugs, growth factors, and anticalcifying agents.
[0344] By way of yet further illustration, the
precursor material may, e.g., be any one or more of the therapeutic
agents disclosed in column 5 of U.S. Pat. No. 5,464,650. Thus, and
referring to such column 5, "The therapeutic substance used in the
present invention could be virtually any therapeutic substance which
possesses desirable therapeutic characteristics for application to a
blood vessel. This can include both solid substances and liquid
substances. For example, glucocorticoids (e.g. dexamethasone,
betamethasone), heparin, hirudin, tocopherol, angiopeptin, aspirin, ACE
inhibitors, growth factors, oligonucleotides, and, more generally,
antiplatelet agents, anticoagulant agents, antimitotic agents,
antioxidants, antimetabolite agents, and anti-inflammatory agents could
be used. Antiplatelet agents can include drugs such as aspirin and
dipyridamole. Aspirin is classified as an analgesic, antipyretic,
anti-inflammatory and antiplatelet drug. Dypridimole is a drug similar
to aspirin in that it has anti-platelet characteristics. Dypridimole is
also classified as a coronary vasodilator. Anticoagulant agents can
include drugs such as heparin, coumadin, protamine, hirudin and tick
anticoagulant protein. Antimitotic agents and antimetabolite agents can
include drugs such as methotrexate, azathioprine, vincristine,
vinblastine, fluorouracil, adriamycin and mutamycin."
[0345] The precurors material may be one or more of
the drugs disclosed in U.S. Pat. No. 5,599,352, the entire disclosure
of which is hereby incorporated by reference into this specification.
As is disclosed in this patent, "Examples of drugs that are thought to
be useful in the treatment of restenosis are disclosed in published
international patent application WO9112779 "Intraluminal Drug Eluting
Prosthesis" which is incorporated herein by reference. Therefore,
useful drugs for treatment of restenosis and drugs that can be
incorporated in the fibrin and used in the present invention can
include drugs such as anticoagulant drugs, antiplatelet drugs,
antimetabolite drugs, anti-inflammatory drugs and antimitotic drugs.
Further, other vasoreactive agents such as nitric oxide releasing
agents could also be used . . . . By this method, drugs such as
glucocorticoids (e.g. dexamethasone, betamethasone), heparin, hirudin,
tocopherol, angiopeptin, aspirin, ACE inhibitors, growth factors,
oligonucleotides, and, more generally, antiplatelet agents,
anticoagulant agents, antimitotic agents, antioxidants, antimetabolite
agents, and anti-inflammatory agents can be applied to a stent . . . ."
[0346] By way of yet further illustration, and
referring to U.S. Pat. No. 5,605,696 (the entire disclosure of which is
hereby incororporated by reference into this specification), the
precursor may be a "selected therapeutic drug" that may be, e.g., " . .
. anticoagulant antiplatelet or antithrombin agents such as heparin,
D-phe-pro-arg-chloromethylketone (synthetic antithrombin),
dipyridamole, hirudin, recombinant hirudin, thrombin inhibitor
(available from Biogen), or c7E3 (an antiplatelet drug from Centocore);
cytostatic or antiproliferative agents such as angiopeptin (a
somatostatin analogue from Ibsen), angiotensin converting enzyme
inhibitors such as Captopril (available from Squibb), Cilazapril
(available from Hoffman-LaRoche), or Lisinopril (available from Merk);
calcium channel blockers (such as Nifedipine), colchicine, fibroblast
growth factor (FGF) antagonists, fish oil (omega 3-fatty acid), low
molecular weight heparin (available from Wyeth, and Glycomed),
histamine antagonists, Lovastatin (an inhibitor of HMG-CoA reductase, a
cholesterol lowering drug from Merk), methotrexate, monoclonal
antibodies (such as to PDGF receptors), nitroprusside,
phosphodiesterase inhibitors, prostacyclin and prostacyclin analogues,
prostaglandin inhibitor (available from Glaxo), Seramin (a PDGF
antagonist), serotonin blockers, steroids, thioprotease inhibitors, and
triazolopyrimidine (a PDGF antagonist). Other therapeutic drugs which
may be appropriate include alphainterferon and genetically engineered
epithelial cells, for example."
[0347] By way of yet further illustration, and
referring to U.S. Pat. No. 5,700,286 (the entire disclosure of which is
hereby incorporated by reference into this specification), precursor
material may be a therapeutic agent or drug " . . . including, but not
limited to, antiplatelets, antithrombins, cytostatic and
antiproliferative agents, for example, to reduce or prevent restenosis
in the vessel being treated. The therapeutic agent or drug is
preferably selected from the group of therapeutic agents or drugs
consisting of sodium heparin, low molecular weight heparin, hirudin,
argatroban, forskolin, vapiprost, prostacyclin and prostacyclin
analogues, dextran, D-phe-pro-arg-chloromethylketone, dipyridamole,
glycoprotein IIb/IIIa platelet membrane receptor antibody, recombinant
hirudin, thrombin inhibitor, angiopeptin, angiotensin converting enzyme
inhibitors, (such as Captopril, available from Squibb; Cilazapril,
available for Hoffman-La Roche; or Lisinopril, available from Merck)
calcium channel blockers, colchicine, fibroblast growth factor
antagonists, fish oil, omega 3-fatty acid, histamine antagonists,
HMG-CoA reductase inhibitor, methotrexate, monoclonal antibodies,
nitroprusside, phosphodiesterase inhibitors, prostaglandin inhibitor,
seramin, serotonin blockers, steroids, thioprotease inhibitors,
triazolopyrimidine and other PDGF antagonists, alpha-interferon and
genetically engineered epithelial cells, and combinations thereof."
[0348] By way of yet further illustration, and
referring to U.S. Pat. No. 5,900,433 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
precursor material may be a congener of an endothelium-derived
bioactive composition of matter. This congener is discussed in column 7
of the patent, wherein it is disclosed that "We have discovered that
administration of a congener of an endothelium-derived bioactive agent,
more particularly a nitrovasodilator, representatively the nitric oxide
donor agent sodium nitroprusside, to an extravascular treatment site,
at a therapeutically effective dosage rate, is effective for abolishing
CFR's while reducing or avoiding systemic effects such as supression of
platelet function and bleeding . . . congeners of an
endothelium-derived bioactive agent include prostacyclin, prostaglandin
E1, and a nitrovasodilator agent. Nitrovasodilater agents include
nitric oxide and nitric oxide donor agents, including L-arginine,
sodium nitroprusside and nitroglycycerine."
[0349] By way of yet further illustration, the
precursor material may be heparin. As is disclosed in U.S. Pat. No.
6,120,536 (the entire disclosure of which is hereby incorporated by
reference into this specification), "While heparin is preferred as the
incorporated active material, agents possibly suitable for
incorporation include antithrobotics, anticoagulants, antibiotics,
antiplatelet agents, thorombolytics, antiproliferatives, steroidal and
non-steroidal antinflammatories, agents that inhibit hyperplasia and in
particular restenosis, smooth muscle cell inhibitors, growth factors,
growth factor inhibitors, cell adhesion inhibitors, cell adhesion
promoters and drugs that may enhance the formation of healthy
neointimal tissue, including endothelial cell regeneration."
[0350] By way of yet further illustration, and
referring to U.S. Pat. No. 6,624,138 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
precursor material may be one or more of the drugs described in this
patent. Thus, and referring to columns 9 et seq. of such patent,
"Straub et al. in U.S. Pat. No. 6,395,300 discloses a wide variety of
drugs that are useful in the methods and compositions described herein,
entire contents of which, including a variety of drugs, are
incorporated herein by reference. Drugs contemplated for use in the
compositions described in U.S. Pat. No. 6,395,300 and herein disclosed
include the following categories and examples of drugs and alternative
forms of these drugs such as alternative salt forms, free acid forms,
free base forms, and hydrates: analgesics/antipyretics. (e.g., aspirin,
acetaminophen, ibuprofen, naproxen sodium, buprenorphine, propoxyphene
hydrochloride, propoxyphene napsylate, meperidine hydrochloride,
hydromorphone hydrochloide, morphine, oxycodone, codeine,
dihydrocodeine bitartrate, pentazocine, hydrocodone bitartrate,
levorphanol, diflunisal, trolamine salicylate, nalbuphine
hydrochloride, mefenamic acid, butorphanol, choline salicylate,
butalbital, phenyltoloxamine citrate, diphenhydramine citrate,
methotrimeprazine, cinnamedrine hydrochloride, and meprobamate);
antiasthamatics (e.g., ketotifen and traxanox); antibiotics (e.g.,
neomycin, streptomycin, chloramphenicol, cephalosporin, ampicillin,
penicillin, tetracycline, and ciprofloxacin); antidepressants (e.g.,
nefopam, oxypertine, doxepin, amoxapine, trazodone, amitriptyline,
maprotiline, phenelzine, desipramine, nortriptyline, tranylcypromine,
fluoxetine, doxepin, imipramine, imipramine pamoate, isocarboxazid,
trimipramine, and protriptyline); antidiabetics (e.g., biguanides and
sulfonylurea derivatives); antifungal agents (e.g., griseofulvin,
ketoconazole, itraconizole, amphotericin B, nystatin, and candicidin);
antihypertensive agents (e.g., propanolol, propafenone, oxyprenolol,
nifedipine, reserpine, trimethaphan, phenoxybenzamine, pargyline
hydrochloride, deserpidine, diazoxide, guanethidine monosulfate,
minoxidil, rescinnamine, sodium nitroprusside, rauwolfia serpentina,
alseroxylon, and phentolamine); anti-inflammatories (e.g.,
(non-steroidal) indomethacin, ketoprofen, flurbiprofen, naproxen,
ibuprofen, ramifenazone, piroxicam, (steroidal) cortisone,
dexamethasone, fluazacort, celecoxib, rofecoxib, hydrocortisone,
prednisolone, and prednisone); antineoplastics (e.g., cyclophosphamide,
actinomycin, bleomycin, daunorubicin, doxorubicin, epirubicin,
mitomycin, methotrexate, fluorouracil, carboplatin, carmustine (BCNU),
methyl-CCNU, cisplatin, etoposide, camptothecin and derivatives
thereof, phenesterine, paclitaxel and derivatives thereof, docetaxel
and derivatives thereof, vinblastine, vincristine, tamoxifen, and
piposulfan); antianxiety agents (e.g., lorazepam, buspirone, prazepam,
chlordiazepoxide, oxazepam, clorazepate dipotassium, diazepam,
hydroxyzine pamoate, hydroxyzine hydrochloride, alprazolam, droperidol,
halazepam, chlormezanone, and dantrolene); immunosuppressive agents
(e.g., cyclosporine, azathioprine, mizoribine, and FK506 (tacrolimus));
antimigraine agents (e.g., ergotamine, propanolol, isometheptene
mucate, and dichloralphenazone); sedatives/hypnotics (e.g.,
barbiturates such as pentobarbital, pentobarbital, and secobarbital;
and benzodiazapines such as flurazepam hydrochloride, triazolam, and
midazolam); antianginal agents (e.g., beta-adrenergic blockers; calcium
channel blockers such as nifedipine, and diltiazem; and nitrates such
as nitroglycerin, isosorbide dinitrate, pentearythritol tetranitrate,
and erythrityl tetranitrate); antipsychotic agents (e.g., haloperidol,
loxapine succinate, loxapine hydrochloride, thioridazine, thioridazine
hydrochloride, thiothixene, fluphenazine, fluphenazine decanoate,
fluphenazine enanthate, trifluoperazine, chlorpromazine, perphenazine,
lithium citrate, and prochlorperazine); antimanic agents (e.g., lithium
carbonate); antiarrhythmics (e.g., bretylium tosylate, esmolol,
verapamil, amiodarone, encainide, digoxin, digitoxin, mexiletine,
disopyramide phosphate, procainamide, quinidine sulfate, quinidine
gluconate, quinidine polygalacturonate, flecainide acetate, tocainide,
and lidocaine); antiarthritic agents (e.g., phenylbutazone, sulindac,
penicillanine, salsalate, piroxicam, azathioprine, indomethacin,
meclofenamate, gold sodium thiomalate, ketoprofen, auranofin,
aurothioglucose, and tolmetin sodium); antigout agents (e.g.,
colchicine, and allopurinol); anticoagulants (e.g., heparin, heparin
sodium, and warfarin sodium); thrombolytic agents (e.g., urokinase,
streptokinase, and alteplase); antifibrinolytic agents (e.g.,
aminocaproic acid); hemorheologic agents (e.g., pentoxifylline);
antiplatelet agents (e.g., aspirin); anticonvulsants (e.g., valproic
acid, divalproex sodium, phenytoin, phenytoin sodium, clonazepam,
primidone, phenobarbitol, carbamazepine, amobarbital sodium,
methsuximide, metharbital, mephobarbital, mephenytoin, phensuximide,
paramethadione, ethotoin, phenacemide, secobarbitol sodium, clorazepate
dipotassium, and trimethadione); antiparkinson agents (e.g.,
ethosuximide); antihistamines/antipruritics (e.g., hydroxyzine,
diphenhydramine, chlorpheniramine, brompheniramine maleate,
cyproheptadine hydrochloride, terfenadine, clemastine fumarate,
triprolidine, carbinoxamine, diphenylpyraline, phenindamine, azatadine,
tripelennamine, dexchlorphenirarnine maleate, methdilazine,; agents
useful for calcium regulation (e.g., calcitonin, and parathyroid
hormone); antibacterial agents (e.g., amikacin sulfate, aztreonam,
chloramphenicol, chloramphenicol palirtate, ciprofloxacin, clindamycin,
clindamycin palmitate, clindamycin phosphate, metronidazole,
metronidazole hydrochloride, gentamicin sulfate, lincomycin
hydrochloride, tobramycin sulfate, vancomycin hydrochloride, polymyxin
B sulfate, colistimethate sodium, and colistin sulfate); antiviral
agents (e.g., interferon alpha, beta or gamma, zidovudine, amantadine
hydrochloride, ribavirin, and acyclovir); antimicrobials (e.g.,
cephalosporins such as cefazolin sodium, cephradine, cefaclor,
cephapirin sodium, ceftizoxime sodium, cefoperazone sodium, cefotetan
disodium, cefuroxime e azotil, cefotaxime sodium, cefadroxil
monohydrate, cephalexin, cephalothin sodium, cephalexin hydrochloride
monohydrate, cefamandole nafate, cefoxitin sodium, cefonicid sodium,
ceforanide, ceftriaxone sodium, ceftazidime, cefadroxil, cephradine,
and cefuroxime sodium; penicillins such as ampicillin, amoxicillin,
penicillin G benzathine, cyclacillin, ampicillin sodium, penicillin G
potassium, penicillin V potassium, piperacillin sodium, oxacillin
sodium, bacampicillin hydrochloride, cloxacillin sodium, ticarcillin
disodium, azlocillin sodium, carbenicillin indanyl sodium, penicillin G
procaine, methicillin sodium, and nafcillin sodium; erythromycins such
as erythromycin ethylsuccinate, erythromycin, erythromycin estolate,
erythromycin lactobionate, erythromycin stearate, and erythromycin
ethylsuccinate; and tetracyclines such as tetracycline hydrochloride,
doxycycline hyclate, and minocycline hydrochloride, azithromycin,
clarithromycin); anti-infectives (e.g., GM-CSF); bronchodilators (e.g.,
sympathomimetics such as epinephrine hydrochloride, metaproterenol
sulfate, terbutaline sulfate, isoetharine, isoetharine mesylate,
isoetharine hydrochloride, albuterol sulfate, albuterol,
bitolterolmesylate, isoproterenol hydrochloride, terbutaline sulfate,
epinephrine bitartrate, metaproterenol sulfate, epinephrine, and
epinephrine bitartrate; anticholinergic agents such as ipratropium
bromide; xanthines such as aminophylline, dyphylline, metaproterenol
sulfate, and aminophylline; mast cell stabilizers such as cromolyn
sodium; inhalant corticosteroids such as beclomethasone dipropionate
(BDP), and beclomethasone dipropionate monohydrate; salbutamol;
ipratropium bromide; budesonide; ketotifen; salmeterol; xinafoate;
terbutaline sulfate; triamcinolone; theophylline; nedocromil sodium;
metaproterenol sulfate; albuterol; flunisolide; fluticasone
proprionate; steroidal compounds and hormones (e.g., androgens such as
danazol, testosterone cypionate, fluoxymesterone, ethyltestosterone,
testosterone enathate, methyltestosterone, fluoxymesterone, and
testosterone cypionate; estrogens such as estradiol, estropipate, and
conjugated estrogens; progestins such as methoxyprogesterone acetate,
and norethindrone acetate; corticosteroids such as triamcinolone,
betamethasone, betamethasone sodium phosphate, dexamethasone,
dexamethasone sodium phosphate, dexamethasone acetate, prednisone,
methylprednisolone acetate suspension, triamcinolone acetonide,
methylprednisolone, prednisolone sodium phosphate, methylprednisolone
sodium succinate, hydrocortisone sodium succinate, triamcinolone
hexacetonide, hydrocortisone, hydrocortisone cypionate, prednisolone,
fludrocortisone acetate, paramethasone acetate, prednisolone tebutate,
prednisolone acetate, prednisolone sodium phosphate, and hydrocortisone
sodium succinate; and thyroid hormones such as levothyroxine sodium);
hypoglycemic agents (e.g., human insulin, purified beef insulin,
purified pork insulin, glyburide, chlorpropamide, glipizide,
tolbutarnide, and tolazamide); hypolipidemic agents (e.g., clofibrate,
dextrothyroxine sodium, probucol, pravastitin, atorvastatin,
lovastatin, and niacin); proteins (e.g., DNase, alginase, superoxide
dismutase, and lipase); nucleic acids (e.g., sense or anti-sense
nucleic acids encoding any therapeutically useful protein, including
any of the proteins described herein); agents useful for erythropoiesis
stimulation (e.g., erythropoietin); antiulcer/antireflux agents (e.g.,
famotidine, cimetidine, and ranitidine hydrochloride);
antinauseants/antiemetics (e.g., meclizine hydrochloride, nabilone,
prochlorperazine, dimenhydrinate, promethazine hydrochloride,
thiethylperazine, and scopolamine); as well as other drugs useful in
the compositions and methods described herein include mitotane,
halonitrosoureas, anthrocyclines, ellipticine, ceftriaxone,
ketoconazole, ceftazidime, oxaprozin, albuterol, valacyclovir,
urofollitropin, famciclovir, flutamide, enalapril, mefformin,
itraconazole, buspirone, gabapentin, fosinopril, tramadol, acarbose,
lorazepan, follitropin, glipizide, omeprazole, fluoxetine, lisinopril,
tramsdol, levofloxacin, zafirlukast, interferon, growth hormone,
interleukin, erythropoietin, granulocyte stimulating factor,
nizatidine, bupropion, perindopril, erbumine, adenosine, alendronate,
alprostadil, benazepril, betaxolol, bleomycin sulfate, dexfenfluramine,
diltiazem, fentanyl, flecainid, gemcitabine, glatiramer acetate,
granisetron, lamivudine, mangafodipir trisodium, mesalamine, metoprolol
fumarate, metronidazole, miglitol, moexipril, monteleukast, octreotide
acetate, olopatadine, paricalcitol, somatropin, sumatriptan succinate,
tacrine, verapamil, nabumetone, trovafloxacin, dolasetron, zidovudine,
finasteride, tobramycin, isradipine, tolcapone, enoxaparin,
fluconazole, lansoprazole, terbinafine, pamidronate, didanosine,
diclofenac, cisapride, venlafaxine, troglitazone, fluvastatin,
losartan, imiglucerase, donepezil, olanzapine, valsartan, fexofenadine,
calcitonin, and ipratropium bromide. These drugs are generally
considered to be water soluble." Any of these water-soluble drugs may
be used as precursors in the process of this invention to make a
composition with the desired magnetic properties.
[0351] As is also disclosed in U.S. Pat. No.
6,624,138, "Preferred drugs useful in the present invention may include
albuterol, adapalene, doxazosin mesylate, mometasone furoate, ursodiol,
amphotericin, enalapril maleate, felodipine, nefazodone hydrochloride,
valrubicin, albendazole, conjugated estrogens, medroxyprogesterone
acetate, nicardipine hydrochloride, zolpidem tartrate, amlodipine
besylate, ethinyl estradiol, omeprazole, rubitecan, amlodipine
besylate/benazepril hydrochloride, etodolac, paroxetine hydrochloride,
paclitaxel, atovaquone, felodipine, podofilox, paricalcitol,
betamethasone dipropionate, fentanyl, pramipexole dihydrochloride,
Vitamin D3 and related analogues, finasteride, quetiapine fumarate,
alprostadil, candesartan, cilexetil, fluconazole, ritonavir, busulfan,
carbamazepine, flumazenil, risperidone, carbemazepine, carbidopa,
levodopa, ganciclovir, saquinavir, amprenavir, carboplatin, glyburide,
sertraline hydrochloride, rofecoxib carvedilol, halobetasolproprionate,
sildenafil citrate, celecoxib, chlorthalidone, imiquimod, simvastatin,
citalopram, ciprofloxacin, irinotecan hydrochloride, sparfloxacin,
efavirenz, cisapride monohydrate, lansoprazole, tamsulosin
hydrochloride, mofafinil, clarithromycin, letrozole, terbinafine
hydrochloride, rosiglitazone maleate, diclofenac sodium, lomefloxacin
hydrochloride, tirofiban hydrochloride, telmisartan, diazapam,
loratadine, toremifene citrate, thalidomide, dinoprostone, mefloquine
hydrochloride, trandolapril, docetaxel, mitoxantrone hydrochloride,
tretinoin, etodolac, triamcinolone acetate, estradiol, ursodiol,
nelfinavir mesylate, indinavir, beclomethasone dipropionate, oxaprozin,
flutamide, famotidine, nifedipine, prednisone, cefuroxime, lorazepam,
digoxin, lovastatin, griseofulvin, naproxen, ibuprofen, isotretinoin,
tamoxifen citrate, nimodipine, amiodarone, and alprazolam. Specific
non-limiting examples of some drugs that fall under the above
categories include paclitaxel, docetaxel and derivatives, epothilones,
nitric oxide release agents, heparin, aspirin, coumadin, PPACK,
hirudin, polypeptide from angiostatin and endostatin, methotrexate,
5-fluorouracil, estradiol, P-selectin Glycoprotein ligand-1 chimera,
abciximab, exochelin, eleutherobin and sarcodictyin, fludarabine,
sirolimus, tranilast, VEGF, transforming growth factor (TGF)-beta,
Insulin-like growth factor (IGF), platelet derived growth factor
(PDGF), fibroblast growth factor (FGF), RGD peptide, beta or gamma ray
emitter (radioactive) agents, and dexamethasone, tacrolimus,
actinomycin-D, batimastat etc." These drugs also may be used in the
process of this invention to make magnetic compositons.
ANOTHER PREFERRED COMPOUND OF THE INVENTION
[0352] In another embodiment of this invention,
there is provided a compound that, in spite of having a molecular
weight in excess of 550, still has a water solubility in excess of
about 10 micrograms per milliliter. In particular, there is provided a
compound with a molecular weight of at least about 550, a water
solubility of at least about 10 micrograms per milliliter, a pKa
dissociation constant of from about 1 to about 15, and a partition
coefficient of from about 1.0 to about 50.
[0353] The compound of this embodiment of the
invention has a molecular weight of at least about 550. In one
embodiment, this compound has a molecular weight of at least about 700.
[0354] The water solubility of this compound is at
least about 1 micrograms per milliliter and, more preferably, at least
about 10 micrograms per milliliter. In one embodiment, such compound
has a water solubility of at least about 100 micrograms per milliliter.
In yet another embodiment, such compound has a water solubility of at
least about 1,000 micrograms per milliliter.
[0355] The compound of this embodiment of the
invention has a pKa dissociation constant of from about 1 to about 15.
As used herein, the term "pKa dissociation constant" is equal to--log
K.sub.a, wherein K.sub.a is equal to (H.sub.3 O.sup.+][A.sup.-]/[HA],
wherein the square brackets ([ ]) indicate concentration, and wherein A
is the counterion. Reference may be had, e.g., to pages 327-328 of
Maitland Jones, Jr.'s "Organic Chemistry" (W. M. Norton &
Company, New York, N.Y., 1997). Reference may also be had, e.g., to
U.S. Pat. Nos. 5,036,164; 5,025,063; 5,767,066; 5,155,162; 5,132,000;
and 5,079,134. The entire disclosure of each of these United States
patents is hereby incorporated by reference into this specification
[0356] As is known to those skilled in the art, and
as is disclosed at pages 39 et seq. of Stephen H. Curry et al.'s
"Manual of Laboratory Phamaconkinetics" (John Wiley & Sons, New
York, N.Y., 1983), "Many drugs are weak acids and/or bases. The degree
of ionization will influence the absorption, distribution, and
excretion in vivo, the solubility at a given pH, the distribution of
the drug between aqueous and organic pahses the choice of pH in liquid
chromatographic separations, etc. . . . . From the above it follows
that the pH at which the compound is 50 percent ionized is equal to the
pK.sub.a To determine a value of pK.sub.a the relative concentrations
of ionized and non-ionized forms msut be known at a particular pH.
Several methods are available, including potentiometric titration,
conductimetry, solubility, and spectrometery . . . ."
[0357] The compound of this embodiment of the
invention preferably has a partition coefficient of from about 1.0 to
about 50. This partition coefficient is also dicussed at pages 41 et
seq. of the aforementioned Curry book, wherein it is disclosed that:
"When a solute is distributed between two immiscible phases, 1 and 2,
the ratio of the activities of the solute in the phases is constant. If
the solutions are dilute and ideal behavior is assumed, then the ratio
of the concentration of the solute will be constant . . . . The
constant is known as the partition (or distribution) coefficient . . .
. The convention with regard to which phase is classed as 1 and which
is as 2 is not entirely clear. Usually, partition coefficients are
defined as the concentration in the organic phase divided by the
concentration in the aqueous phase."
[0358] It is preferred to measure the partition
coefficient between water and octane. Means for measuring the partition
coefficient are well known to-those skilled in the art and are
described, e.g., in the patent literature. Reference may be had, e.g.,
to U.S. Pat. Nos. 6,660,288; 6,645,479; 6,585,953; 6,583,136;
6,500,995; 6,475,961; 6.369.001; 6,362,158; 6,315,907; 6,310,013;
6,271,665; 6,218,378; 6,203,817; 6,156,826; 6,124,086; 6,071,409;
6,045,835; 6,042,792; 5,874,481; 5,763,146; 5,555,747; 5,252,320
(complexes having a partition coefficient above 300); U.S. Pat. Nos.
5,254,342; 5,252,320; 5,164,189; 5,071,769; 5,041,523; -5,013,556;
5,011,982; 5,011,967; 4,986,917; 4,980,453; 4,957,862; 4,940,654;
4,886,656; 4,859,584; 4,762,701; 4,746,745; 4,743,550 (method for
improving the partition coefficient in enzyme containing systems having
at least two phases), U.S. Pat. Nos. 4,736,016; 4,721,730; 4,699,924;
4,619,939; 4,420,473; 4,371,540; 4,363,793; and the like. The entire
disclosure of each of these United States patents is hereby
incorporated by reference into this specification.
[0359] In one embodiment, the compound of this
invention has a tumor uptake of at least about 10 percent and, more
preferably, at least about 20 percent. In one embodiment, the tumor
uptake is at least about 30 percent. In yet another embodiment, the
tumor uptake is at least about 50 percent. In yet another embodiment,
the tumor uptake is at least about 70 percent.
[0360] Tumor uptake is the extent to which the
compound is selectively taken up by tumors from blood. It may be
determined by dissolving 1 milligram of the compound to be tested in 1
milliliter of "Cremophor EL," a 1:1 (volume/volume) mixture of
anhydrous ethanol and polyethoxylated castor oil. For a discussion of
such "Cremophor EL," reference may be had, e.g., to U.S. Pat. No.
5,591,715 (methods and compositions for reducing multidrug resistance),
U.S. Pat. No. 5,686,488 (polyethoxylated castor oil products as
anti-inflammatory agents), U.S. Pat. No. 5,776,891 (compositions for
reducing multidrug resistance), and the like. The entire disclosure4 of
each of these United States patents is hereby incorporated by reference
into this specification.
[0361] The mixture of the compound to be tested and
"Cremophor EL" is injected ito the blood supply (artery) of a
laboratory rat, near the tumor. Thirty seconds later the rate is
sacrificed, the tumor is removed, and it and the blood are analyzed for
the presence of the compound. Both the arterial blood and the venous
drainage beyond the tumor are analyzed. The percent tumor uptake is
equal to ([C.sub.a-C.sub.v]/C.sub.a).times.100, wherein C.sub.a is the
concentration of the compound in the arterial blood, and C.sub.v is the
concentration of the compound in the venous blood.
[0362] Other conventional means may be used to
determine the tumor uptake. Reference may be had, e.g., to U.S. Pat.
Nos. 4,448,762; 5,077,034; 5,094,835; 5,135,717; 5,166,944; 5,284,831;
5,391,547; 5,399,338; 5,474,772; 5,516,940; 5,578,287; 5,595,738;
5,601,800; 5,608,060; 5,616,690; 5,624,798; 5,624,896; 5,683,873;
5,688,501; 5,753,262; 5,762,909; 5,783,169; 5,810,888; 5,811,073;
5,820,873; 5,847,121; 5,869,248; 5,877,162; 5,891,689; 5,902,604;
5,911,969; 5,914,312; 5,955,605; 5,965,598; 5,976,535;
5,976,874;6,008,319; 6,022,522; 6,022,966; 6,025,165; 6,027,725;
6,057,153; 6,074,626; 6,103,889; 6,121,424; 6,165,441; 6,171,577;
6,172,045; 6,197,333; 6,217,869; 6,217,886; 6,235,264; 6,242,477;
6,331,287; 6,348,214; 6,358,490; 6,403,096; 6,426,400; 6,436,708;
6,441,158; 6,458,336; 6,498,181; 6,515,110; 6,537,521; 6,610,478;
6,617,135; 6,620,805; 6,624,187; 6,723,318; 6,734,171; 6,685,915; and
the like. The entire disclosure of each of these United States patents
is hereby incorporated by reference into this specification.
GUIDED DELIVERY OF THE COMPOUNDS OF THIS INVENTION
[0363] In one preferred embodiment, the magnetic
properties of the anti-mitotic compound of this invention are used in
order to preferentially deliver such compound to a specified site. In
another embodiment, the magnetic properties of the compounds and
compositions of this invention which are not necessarily anti-mitotic
but have the desired magnetic properties also may be used to deliver
such compounds and/or compositions to a desired site.
[0364] Thus, by way of illustration, one may guide
delivery of the compound of this invention with conventional magnetic
focusing means. In one aspect of this embodiment, a magnetic field of a
specified strength is focused onto a desired therapeutic site, such as
a tumor to be treated, whereby the compound is selectively drawn to the
therapeutic site and binds with tubulin moleuces at the site. In one
embodiment, the focused magnetic field has a field strength of at least
about 6 Tesla in order to cause microtubules to move linearly. The
magnetic field may, e.g., be focused for a period of at least about 30
minutes following the administration of the compound of this invention.
[0365] One may use any of the conventional magnetic
field generators known to those skilled in the art to produce such a
magnetic field. Thus, e.g., one may use one or more of the magnetic
field generators disclosed in U.S. Pat. Nos. 6,503,364; 6,377,149
(magnetic field generator for magnetron plasma generation); U.S. Pat.
No. 6,353,375 (magnetostatic wave device); U.S. Pat. No. 6,340,888
(magnetic field generator for MRI); U.S. Pat. Nos. 6,336,989; 6,335,617
(device for calibrating a magnetic field generator); U.S. Pat. Nos.
6,313,632; 6,297,634; 6,275,128; 6,246,066 (magnetic field generator
and charged particle beam irradiator); U.S. Pat. No. 6,114,929
(magnetostatic wave device); U.S. Pat. No. 6,099,459 (magnetic field
generating device and method of generating and applying a magnetic
field); U.S. Pat. Nos. 5,795,212; 6,106,380 (deterministic
magnetorheological finishing); U.S. Pat. No. 5,839,944 (apparatus for
deterministic magnetorheological finishing); U.S. Pat. No. 5,971,835
(system for abrasive jet shaping and polishing of a surface using a
magnetorheological fluid); U.S. Pat. Nos. 5,951,369; 6,506,102 (system
for magnetorheological finishing of substrates); U.S. Pat. Nos.
6,267,651; 6,309,285 (magnetic wiper); U.S. Pat. Nos. 5,929,732 and
6,488,615 (which describe devices and methods for creating a high
intensity magnetic field for magnetically guiding a anti-mitotic
compoundto a predetermined site within a biological organism), and the
like. The entire disclosure of each of these United States patents is
hereby incorporated by reference into this specification.
The Use of Externally Applied Energy to Affect an
Implanted Medical Device
[0366] The prior art discloses many devices in
which an externally applied electromagnetic field (i.e., a field
originating outside of a biological organism, such as a human body) is
generated in order to influence one or more implantable devices
disposed within the biological organism; these may be used in
conjunction with anti-mitotic compound of this invention. Some of these
devices are described below.
[0367] U.S. Pat. No. 3,337,776 describes a device
for producing controllable low frequency magnetic fields; the entire
disclosure of this patent is hereby incorporated by reference into this
specification. Thus, e.g., claim 1 of this patent describes a
biomedical apparatus for the treatment of a subject with controllable
low frequency magnetic fields, comprising solenoid means for creating
the magnetic field. These low-frequency magnetic fields may be used to
affect the anti-mitotic compounds of this invention, and/or tubulin
and/or microtubules and/or other moieties.
[0368] U.S. Pat. No. 3,890,953 also discloses an
apparatus for promoting the growth of bone and other body tissues by
the application of a low frequency alternating magnetic field; the
entire disclosure of this United States patent is hereby incorporated
by reference into this specification. This patent claims "In an
electrical apparatus for promoting the growth of bone and other body
tissues by the application thereto of a low frequency alternating
magnetic field, such apparatus having current generating means and
field applicator means, the improvement wherein the applicator means
comprises a flat solenoid coil having an axis about which the coil is
wound and composed of a plurality of parallel and flexible windings,
each said winding having two adjacent elongate portions and two
180.degree. coil bends joining said elongate portions together, said
coil being flexible in the coil plane in the region of said elongate
portion for being bent into a U-shape, said coil being bent into such
U-shape about an axis parallel to the coil axis and adapted for
connection to a source of low frequency alternating current." These
low-frequency magnetic fields may be used to affect the anti-mitotic
compounds of this invention, and/or tubulin and/or microtubules and/or
other moieties.
[0369] The device of U.S. Pat. No. 3,890,953 is
described, in part, at lines 52 et seq. of column 2, wherein it is
disclosed that: "The apparatus shown diagrammatically in FIG. 1
comprises a AC generator 10, which supplies low frequency AC at the
output terminals 12. The frequency of the AC lies below 150 Hz, for
instance between 1 and 50 or 65 Hz. It has been found particularly
favorable to use a frequency range between 5 or 10 and 30 Hz, for
example 25 Hz. The half cycles of the alternating current should have
comparatively gently sloping leading and trailing flanks (rise and fall
times of the half cycles being for example in the order of magnitude of
a quarter to an eighth of the length of a cycle); the AC can thus be a
sinusoidal current with a low non-linear distortion, for example less
than 20 percent, or preferably less than 10 percent, or a triangular
wave current."
[0370] U.S. Pat. No. 4,095,588 discloses a
"vascular cleansing device" adapted to " . . . effect motion of the red
corpuscles in the blood stream of a vascular system . . . whereby these
red cells may cleanse the vascular system by scrubbing the walls
thereof . . . ;" the entire disclosure of this United States patent is
hereby incorporated by reference into this specification. This patent
claims (in claim 3) "A means to propel a red corpuscle in a vibratory
and rotary fashion, said means comprising an electronic circuit and
magnetic means including: a source of electrical energy; a variable
oscillator connected to said source; a binary counter means connected
to said oscillator to produce sequential outputs; a plurality of
deflection amplifier means connected to be operable by the outputs of
said binary counter means in a sequential manner, said amplifier means
thereby controlling electrical energy from said source; a plurality of
separate coils connected in separate pairs about an axis in series
between said deflection amplifier means and said source so as to be
sequentially operated in creating an electromagnetic field from one
coil to the other and back again and thence to adjacent separate coils
for rotation of the electromagnetic field from one pair of coils to
another; and a table within the space encircled by said plurality of
coils, said table being located so as to place a person along the axis
such that the red corpuscles of the person's vascular system are within
the electromagnetic field between the coils creating same." The energy
used to affect such red blood corpuscles may also be used affect the
anti-mitotic compounds of this invention, and/or tubulin and/or
microtubules and/or other moieties.
[0371] U.S. Pat. No. 4,323,075 discloses an
implantable defibrillator with a rechargeable power supply; the entire
disclosure of this patent is hereby incorporated by reference into this
specification. Claim 1 of this patent describes "A fully implantable
power supply for use in a fully implantable defibrillator having an
implantable housing, a fibrillation detector for detecting fibrillation
of the heart of a recipient, an energy storage and discharge device for
storing and releasing defibrillation energy into the heart of the
recipient and an inverter for charging the energy storage and discharge
device in response to detection of fibrillation by the fibrillation
detector, the inverter requiring a first level of power to be
operational and the fibrillation detector requiring a second level of
power different from said first level of power to be operational, said
power supply comprising: implantable battery means positioned within
said implantable housing, said battery means including a plurality of
batteries arranged in series, each of said batteries having a pair of
output terminals, each of said batteries producing a distinctly
multilevel voltage across its pair of output terminals, said voltage
being at a first level when the battery is fully charged and dropping
to a second level at some point during the discharge of the battery;
and implantable circuit means positioned within said implantable
housing, said circuit means for creating a first conductive path betwen
said serially-connected batteries and said fibrillation detector to
provide said fibrillation detector with said second level of power, and
for creating a second conductive path between said inverter and said
battery means by placing only the batteries operating at said first
level voltage in said second conductive path, and excluding the
remaining batteries from said second conductive path to provide said
inverter with said first level of power." The power supply of this
patent may be used to power, e.g., one or more magnetic focusing
devices.
[0372] U.S. Pat. No. 4,340,038 discloses an
implanted medical system comprised of magnetic field pick-up means for
converting magnetic energy to electrical energy; the entire disclosure
of this patentis hereby incorporated by reference into this
specification. One may use the electrical energy produced by such
pick-up means to affect the anti-mitotic compounds of this invention,
and/or tubulin and/or microtubules and/or other moieties. Such energy
may also be used to power an implanted magnetic focusing device.
[0373] In column 1 of U.S. Pat. No. 4,340,038, at
lines 12 et seq., it is disclosed that "Many types of implantable
devices incorporate a self-contained transducer for converting magnetic
energy from an externally-located magnetic field generator to energy
usable by the implanted device. In such a system having an implanted
device and an externally-located magnetic field generator for powering
the device, sizing and design of the power transfer system is
important. In order to properly design the power transfer system while
at the same time avoiding overdesign, the distance from the implanted
device to the magnetic field generator must be known. However for some
types of implanted devices the depth of the implanted device in a
recipient's body is variable, and is not known until the time of
implantation by a surgeon. One example of such a device is an
intracranial pressure monitoring device (ICPM) wherein skull thickness
varies considerably between recipients and the device must be located
so that it protrudes slightly below the inner surface of the skull and
contacts the dura, thereby resulting in a variable distance between the
top of the implanted device containing a pick-up coil or transducer and
the outer surface of the skull. One conventional technique for
accommodating an unknown distance between the magnetic field generator
and the implanted device includes increasing the transmission power of
the external magnetic field generator. However this increased power can
result in heating of the implanted device, the excess heat being
potentially hazardous to the recipient. A further technique has been to
increase the diameter of the pick-up coil in the implanted device.
However, physical size constraints imposed on many implanted devices
such as the ICPM are critical; and increasing the diameter of the
pick-up coil is undesirable in that it increases the size of the
orifice which must be formed in the recipient's skull. The concentrator
of the present invention solves the above problems by concentrating
magnetic lines of flux from the magnetic generator at the implanted
pick-up coil, the concentrator being adapted to accommodate distance
variations between the implanted device and the magnetic field
generator.
[0374] Claim 1 of U.S. Pat. No. 4,340,038 describes
"In a system including an implanted device having a magnetic field
pick-up means for converting magnetic energy to electrical energy for
energizing said implanted device, and an external magnetic field
generator located so that magnetic lines of flux generated thereby
intersect said pick-up means, a means for concentrating a portion of
said magnetic lines of flux at said pick-up means comprising a metallic
slug located between said generator and said pick-up means, thereby
concentrating said magnetic lines of flux at said pick-up means." claim
5 of this patent further describes the pick-up means as comprising " .
. . a magnetic pick-up coil and said slug is formed in the shape of a
truncated cone and oriented so that a plane defined by the smaller of
said cone end surfaces is adjacent to said substantially parallel to a
plane defined by said magnetic pick-up coil." In one embodiment, such
pick-up means may be located near the site to be treated (such as a
tumor) and may be used to affect the tumor by, e.g., hyperthermia
treatement.
[0375] U.S. Pat. No. 4,361,153 discloses an
implantable telemetry system; the entire disclosure of such United
States patent is hereby incorporated by reference into this
specification. Such an implantable telemetry system, equipped with a
multiplicity of sensors, may be used to report how the anti-mitotic
compounds of this invention, and/or tubulin and/or microtubules and/or
other moieties respond to applied electromagnetic fields.
[0376] As is disclosed at column 1 of U.S. Pat. No.
4,361,153 (see lines 9 et seq.), "Externally applied oscillating
magnetic fields have been used before with implanted devices. Early
inductive cardiac pacers employed externally generated electromagnetic
energy directly as a power source. A coil inside the implant operated
as a secondary transformer winding and was interconnected with the
stimulating electrodes. More recently, implanted stimulators with
rechargeable (e.g., nickel cadmium) batteries have used magnetic
transmission to couple energy into a secondary winding in the implant
to energize a recharging circuit having suitable rectifier circuitry.
Miniature reed switches have been utilized before for implant
communications. They appear to have been first used to allow the
patient to convert from standby or demand mode to fixed rate pacing
with an external magnet. Later, with the advent of programmable
stimulators, reed switches were rapidly cycled by magnetic pulse
transmission to operate pulse parameter selection circuitry inside the
implant. Systems analogous to conventional two-way radio frequency (RF)
and optical communication system have also been proposed. The
increasing versatility of implanted stimulators demands more complex
programming capabilities. While various systems for transmitting data
into the implant have been proposed, there is a parallel need to
develop compatible telemetry systems for signalling out of the implant.
However, the austere energy budget constraints imposed by long life,
battery operated implants rule out conventional transmitters and
analogous systems
[0377] The solution provided by U.S. Pat. No.
4,361,153 is " . . . achieved by the use of a resonant impedance
modulated transponder in the implant to modulate the phase of a
relatively high energy reflected magnetic carrier imposed from outside
of the body." In particular, and as is described by claim 1 of this
patent, there is claimed "An apparatus for communicating variable
information to an external device from an electronic stimulator
implanted in a living human patient, comprising an external unit
including means for transmitting a carrier signal, a hermetically
sealed fully implantable enclosure adapted to be implanted at a fixed
location in the patient's body, means within said enclosure for
generating stimulator outputs, a transponder within said enclosure
including tuned resonant circuit means for resonating at the frequency
of said carrier signal so as to re-radiate a signal at the frequency of
said carrier signal, and means for superimposing an information signal
on the reflected signal by altering the resonance of said tuned circuit
means in accordance with an information signal, said superimposing
means including a variable impedance load connected across said tuned
circuit and means for varying the impedance of said load in accordance
with an information signal, said external unit further including pickup
means for receiving the reflected signal from said transponder and
means for recovering the information signal superimposed thereon, said
receiving means including means reponsive to said reflected signal from
said transponder for producing on associated analog output signal, and
said recovering means including phase shift detector means responsive
to said analog output signal for producing an output signal related to
the relative phase angle thereof."
[0378] U.S. Pat. No. 4,408,607 discloses a
rechargeable, implantable capacitive energy source; the entire
disclosure of this patent is hereby incorporated into this
specification by reference; and this source may be used to directly or
indirectly supply energy to one or more of the anti-mitotic compounds
of this invention, and/or tubulin and/or microtubules and/or other
moieties. As is disclosed in column 1 of such patent (at lines 12 et
seq.), "Medical science has advanced to the point where it is possible
to implant directly within living bodies electrical devices necessary
or advantageous to the welfare of individual patients. A problem with
such devices is how to supply the electrical energy necessary for their
continued operation. The devices are, of course, designed to require a
minimum of electrical energy, so that extended operation from batteries
may be possible. Lithium batteries and other primary, non-rechargeable
cells may be used, but they are expensive and require replacement of
surgical procedures. Nickel-cadmium and other rechargeable batteries
are also available, but have limited charge-recharge characteristics,
require long intervals for recharging, and release gas during the
charging process."The solution to this problem is described, e.g., in
claim 1 of the patent, which describes "An electric power supply for
providing electrical energy to an electrically operated medical device
comprising: capacitor means for accommodating an electric charge; first
means providing a regulated source of unidirectional electrical energy;
second means connecting said first means to said capacitor means for
supplying charging current to said capacitor means at a first voltage
which increases with charge in the capacitor means; third means
deriving from said first means a comparison second voltage of constant
magnitude; comparator means operative when said first voltage reaches a
first value to reduce said first voltage to a second, lower value; and
voltage regulator means connected to said capacitor means and medical
device to limit the voltage supplied to the medical device."
[0379] U.S. Pat. No. 4,416,283 discloses an
implantable shunted coil telemetry transponder employed as a magnetic
pulse transducer for receiving externally transmitted data; the entire
disclosure of this United States patent is hereby incorporated by
reference into this specification. This transponder may be used in a
manner similar to that of the aforementioned telemetry system.
[0380] In particular, a programming system for a
biomedical implant is described in claim 1 of U.S. Pat. No. 4,416,283.
Such claim 1 discloses "In a programming system for a biomedical
implant of the type wherein an external programmer,produces a series of
magnetic impulses which are received and transduced to form a
corresponding electrical pulse input to programmable parameter data
registers inside the implant, wherein the improvement comprises
external programming pulse receiving and transducing circuitry in the
implant including a tuned coil, means responsive to pairs of successive
voltage spikes of opposite polarity magnetically induced across said
tuned coil by said magnetic impulses for forming corresponding binary
pulses duplicating said externally generated magnetic impulses giving
rise to said spikes, and means for outputting said binary pulses to
said data registers to accomplish programming of the implant."
[0381] U.S. Pat. No. 4,871,351 discloses an
implantable pump infusion system; the entire disclosure of this United
States patent is hereby incorporated by reference into this
specification. These implantable pumps are discussed in column 1 of the
patent, wherein it is disclosed that: "Certain human disorders, such as
diabetes, require the injection into the body of prescribed amounts of
medication at prescribed times or in response to particular conditions
or events. Various kinds of infusion pumps have been propounded for
infusing drugs or other chemicals or solutions into the body at
continuous rates or measured dosages. Examples of such known infusion
pumps and dispensing devices are found in U.S. Pat. Nos 3,731,861;
3,692,027; 3,923,060; 4,003,379; 3,951,147; 4,193,397; 4,221,219 and
4,258,711. Some of the known pumps are external and inject the drugs or
other medication into the body via a catheter, but the preferred pumps
are those which are fully implantable in the human body." One may use
the implantable pumps of this patent to delivery the anti-mitotic
compound of this invention to a specified site and, thereafter, to
"finely focus" such delivery by means of magnetic focusing means.
[0382] U.S. Pat. No. 4,871,351 also discloses that:
"Implantable pumps have been used in infusion systems such as those
disclosed in U.S. Pat. Nos. 4,077,405; 4,282,872; 4,270,532; 4,360,019
and 4,373,527. Such infusion systems are of the open loop type. That
is, the systems are pre-programmed to deliver a desired rate of
infusion. The rate of infusion may be programmed to vary with time and
the particular patient. A major disadvantage of such open loop systems
is that they are not responsive to the current condition of the
patient, i.e. they do not have feedback information. Thus, an infusion
system of the open loop type may continue dispensing medication
according to its pre-programmed rate or profile when, in fact, it may
not be needed."
[0383] U.S. Pat. No. 4,871,351 also discloses that:
"There are known closed loop infusion systems which are designed to
control a particular condition of the body, e.g. the blood glucose
concentration. Such systems use feedback control continuously, i.e. the
patient's blood is withdrawn via an intravenous catheter and analysed
continuously and a computer output signal is derived from the actual
blood glucose concentration to drive a pump which infuses insulin at a
rate corresponding to the signal. The known closed loop systems suffer
from several disadvantages. First, since they monitor the blood glucose
concentration continuously they are complex and relatively bulky
systems external to the patient, and restrict the movement of the
patient. Such systems are suitable only for hospital bedside
applications for short periods of time and require highly trained
operating staff. Further, some of the known closed loop systems do not
allow for manually input overriding commands. Examples of closed loop
systems are found in U.S. Pat. Nos. 4,055,175; 4,151,845 and
4,245,634."
[0384] U.S. Pat. No. 4,871,351 also discloses that
"An implanted closed loop system with some degree of external control
is disclosed in U.S. Pat. No. 4,146,029. In that system, a sensor
(either implanted or external) is arranged on the body to sense some
kind of physiological, chemical, electrical or other condition at a
particular site and produced data which corresponds to the sensed
condition at the sensed site. This data is fed directly to an implanted
microprocessor controlled medication dispensing device. A predetermined
amount of medication is dispensed in response to the sensed condition
according to a pre-programmed algorithm in the microprocessor control
unit. An extra-corporeal coding pulse transmitter is provided for
selecting between different algorithms in the microprocessor control
unit. The system of U.S. Pat. No. 4,146,029 is suitable for use in
treating only certain ailments such as cardiac conditions. It is
unsuitable as a blood glucose control system for example, since (i) it
is not practicable to measure the blood glucose concentration
continuously with an implanted sensor and (ii) the known system is
incapable of dispensing discrete doses of insulin in response to
certain events, such as meals and exercise. Furthermore, there are
several disadvantages to internal sensors; namely, due to drift, lack
of regular calibration and limited life, internal sensors do not have
high long-term reliability. If an external sensor is used with the
system of U.S. Pat. No. 4,146,029, the output of the sensor must be fed
through the patient's skin to the implanted mechanism. There are
inherent disadvantages to such a system, namely the high risk of
infection. Since the algorithms which control the rate of infusion are
programmed into the implanted unit, it is not possible to upgrade these
algorithms without surgery. The extra-corporeal controller merely
selects a particular one of several medication programs but cannot
actually alter a program."
[0385] U.S. Pat. No. 4,871,351 also discloses that
"It is an object of the present invention to overcome, or substantially
ameliorate the above described disadvantages of the prior art by
providing an implantable open loop medication infusion system with a
feedback control option"
[0386] The solution to this problem is set forth in
claim 1 of United States patent 4,871,351,which describes: "A medical
infusion system intermittently switchable at selected times between an
open loop system without feedback and a closed loop system with
feedback, said system comprising an implantable unit including means
for controllably dispensing medication into a body, an external
controller, and an extra-corporeal sensor; wherein said implantable
unit comprises an implantable transceiver means for communicating with
a similar external transceiver means in said external controller to
provide a telemetry link between said controller and said implantable
unit, a first reservoir means for holding medication liquid, a liquid
dispensing device, a pump connected between said reservoir means and
said liquid dispensing device, and a first electronic control circuit
means connected to said implantable transceiver means and to said pump
to operate said pump; wherein said external controller comprises a
second electronic control circuit means connected with said external
transceiver means, a transducer means for reading said sensor, said
transducer means having an output connected to said second electronic
control circuit means, and a manually operable electric input device
connected to said second electronic control circuit means; wherein said
pump is operable by said first electronic control circuit means to pump
said medication liquid from said first reservoir means to said
liquid-dispensing deive at a first predetermined rate independent of
the output of said extra-corporeal sensor, and wherein said input
device or said transducer means include means which selectively
operable at intermittent times to respectively convey commands or
output of said transducer representing the reading of said sensor to
said second control circuit to instruct said first control circuit via
said telemetry link to modify the operation of said pump."
[0387] U.S. Pat. No. 4,941,461 describes an
electrically actuated inflatable penile erecton device comprised of an
implantable induction coil and an implantable pump; the entire
disclosure of this United States patent is hereby incorporated by
reference into this specification. The device of this patent is
described, e.g., in claim 1 of the patent, which discloses "An
apparatus for achieving a penile erection in a human male, comprising:
at least one elastomer cylinder having a root chamber and a pendulous
chamber, said elastomer cylinder adapted to be placed in the corpus
carvenosum of the penis; an external magnetic field generator which can
be placed over some section of the penis which generates an alternating
magnetic field; an induction coil contained within said elastomer
cylinder which produces an alternating electric current when in the
proximity of said alternating magnetic filed which is produced by said
external magnetic field generator; and a fluid pumping means located
within said elastomer cylinder, said pumping means being operated by
the electrical power generated in said induction coil to pump fluid
from said root chamber to said pendulous chamber in order to stiffen
said elastomer cylinder for causing the erect state of the penis."
[0388] U.S. Pat. No. 5,487,760 discloses an
implantable signal transceiver disposed in an artificial heart valve;
this transceiver may be used in the process of this invention in
accordance with the aforementioned telemetry device; and the entire
disclosure of this United States patent is hereby incorporated by
reference into this specification. Claim 1 of this patent describes:
"In combination, an artificial heart valve of the type having a tubular
body member, defining a lumen and pivotally supporting at least one
occluder, said body member having a sewing cuff covering an exterior
surface of said body member; and an electronic sensor module disposed
between said sewing cuff and said exterior surface, wherein said sensor
module incorporates a sensor element for detecting movement of said at
least one occluder between an open and a closed disposition relative to
said lumen and wherein said sensor module further includes a signal
transceiver coupled to said sensor element, and means for energizing
said signal transceiver, and wherein said sensor module includes means
for encapsulating said sensor element, signal transceiver and
energizing means in a moisture-impervious container."
[0389] As will be apparent to those skilled in the
art, the sensor/transceiver combination may advantageously be used in
conjunction with the anti-mitotic compound of this invention, and/or
microtubules.
[0390] U.S. Pat. No. 5,702,430 discloses an
implantable power supply; the entire disclosure of such patent is
hereby incorporated by reference into this specification. This
implantable power supply may be used to supply power to either the
compound of this invention, the treatment site, and/or one or more
other devices from which a specified energy output is desired.
[0391] Claim 1 of U.S. Pat. No. 5,702,430
describes: "A surgically implantable power supply comprising battery
means for providing a source of power, charging means for charging the
battery means, enclosure means isolating the battery means from the
human body, gas holding means within the enclosure means for holding
gas generated by the battery means during charging, seal means in the
enclosure means arranged to rapture when the internal gas pressure
exceeds a certain value and inflatable gas container means outside the
enclosure means to receive gas from within the enclosure means when the
seal means has been ruptured."
[0392] Columns 1 through 5 of U.S. Pat. No.
5,702,430 presents an excellent discussion of "prior art" implantable
pump assemblies that may be used, e.g., to deliver the anti-mitotic
compound of this invention. As is disclosed in such portion of U.S.
Pat. No. 5,702,430, "The most widely tested and commonly used
implantable blood pumps employ variable forms of flexible sacks (also
spelled sacs) or diaphragms which are squeezed and released in a
cyclical manner to cause pulsatile ejection of blood. Such pumps are
discussed in books or articles such as Hogness and Antwerp 1991,
DeVries et al 1984, and Farrar et al 1988, and in U.S. Pat. No.
4,994,078 (Jarvik 1991), U.S. Pat. No. 4,704,120 (Slonina 1987), U.S.
Pat. No. 4,936,758 (Coble 1990), and U.S. Pat. No. 4,969,864
(Schwarzmann et al 1990). Sack or diaphragm pumps are subject to
fatigue failure of compliant elements and as such are mechanically and
functionally quite different from the pump which is the subject of the
present invention."
[0393] U.S. Pat. No. 5,702,430 also discloses that
"An entirely different class of implantable blood pumps uses rotary
pumping mechanisms. Most rotary pumps can be classified into two
categories: centrifugal pumps and axial pumps. Centrifugal pumps, which
include pumps marketed by Sarns (a subsidiary of the 3M Company) and
Biomedicus (a subsidiary of Medtronic, Eden Prairie, Minn.), direct
blood into a chamber, against a spinning interior wall (which is a
smooth disk in the Medtronic pump). A flow channel is provided so that
the centrifugal force exerted on the blood generates flow."
[0394] U.S. Pat. No. 5,702,430 also discloses that
"By contrast, axial pumps provide blood flow along a cylindrical axis,
which is in a straight (or nearly straight) line with the direction of
the inflow and outflow. Depending on the pumping mechanism used inside
an axial pump, this can in some cases reduce the shearing effects of
the rapid acceleration and deceleration forces generated in centrifugal
pumps. However, the mechanisms used by axial pumps can inflict other
types of stress and damage on blood cells."
[0395] U.S. Pat. No. 5,702,430 also discloses that
"Some types of axial rotary pumps use impeller blades mounted on a
center axle, which is mounted inside a tubular conduit. As the blade
assembly spins, it functions like a fan, or an outboard motor
propeller. As used herein, "impeller" refers to angled vanes (also
called blades) which are constrained inside a flow conduit; an impeller
imparts force to a fluid that flows through the conduit which encloses
the impeller. By contrast, "propeller" usually refers to non-enclosed
devices, which typically are used to propel vehicles such as boats or
airplanes."
[0396] "Another type of axial blood pump, called
the "Haemopump" (sold by Nimbus) uses a screw-type impeller with a
classic screw (also called an Archimedes screw; also called a helifoil,
due to its helical shape and thin cross-section). Instead of using
several relatively small vanes, the Haemopump screw-type impeller
contains a single elongated helix, comparable to an auger used for
drilling or digging holes. In screw-type axial pumps, the screw spins
at very high speed (up to about 10,000 rpm). The entire Haemopump unit
is usually less than a centimeter in diameter. The pump can be passed
through a peripheral artery into the aorta, through the aortic valve,
and into the left ventricle. It is powered by an external motor and
drive unit."
[0397] U.S. Pat. No. 5,702,430 also discloses that
"Centrifugal or axial pumps are commonly used in three situations: (1)
for brief support during cardio-pulmonary operations, (2) for
short-term support while awaiting recovery of the heart from surgery,
or (3) as a bridge to keep a patient alive while awaiting heart
transplantation. However, rotary pumps generally are not well tolerated
for any prolonged period. Patients who must rely on these units for a
substantial length-of time often suffer from strokes, renal (kidney)
failure, and other organ dysfunction. This is due to the fact that
rotary devices, which must operate at relatively high speeds, may
impose unacceptably high levels of turbulent and laminar shear forces
on blood cells. These forces can damage or lyse (break apart) red blood
cells. A low blood count (anemia) may result, and the disgorged
contents of lysed blood cells (which include large quantities of
hemoglobin) can cause renal failure and lead to platelet activation
that can cause embolisms and stroke."
[0398] "One of the most important problems in axial
rotary pumps in the prior art involves the gaps that exist between the
outer edges of the blades, and the walls of the flow conduit. These
gaps are the site of severe turbulence and shear stresses, due to two
factors. Since implantable axial pumps operate at very high speed, the
outer edges of the blades move extremely fast and generate high levels
of shear and turbulence. In addition, the gap between the blades and
the wall is usually kept as small as possible to increase pumping
efficiency and to reduce the number of cells that become entrained in
the gap area. This can lead to high-speed compression of blood cells as
they are caught in a narrow gap between the stationary interior wall of
the conduit and the rapidly moving tips or edges of the blades."
[0399] U.S. Pat. No. 5,702,430 also discloses that
"An important factor that needs to be considered in the design and use
of implantable blood pumps is "residual cardiac function," which is
present in the overwhelming majority of patients who would be
candidates for mechanical circulatory assistance. The patient's heart
is still present and still beating, even though, in patients who need
mechanical pumping assistance, its output is not adequate for the
patient's needs. In many patients, residual cardiac functioning often
approaches the level of adequacy required to support the body, as
evidenced by the fact that the patient is still alive when implantation
of an artificial pump must be considered and decided. If cardiac
function drops to a level of severe inadequacy, death quickly becomes
imminent, and the need for immediate intervention to avert death
becomes acute."
[0400] U.S. Pat. No. 5,702,430 also discloses that
"Most conventional ventricular assist devices are designed to assume
complete circulatory responsibilities for the ventricle they are
"assisting. As such, there is no need, nor presumably any advantage,
for the device to interact in harmony with the assisted ventricle.
Typically, these devices utilize a "fill-to-empty" mode that, for the
most part, results in emptying of the device in random association with
native heart contraction. This type of interaction between the device
and assisted ventricle ignores the fact that the overwhelming majority
of patients who would be candidates for mechanical assistance have at
least some significant residual cardiac function."
[0401] U.S. Pat. No. 5,702,430 also discloses that
"It is preferable to allow the natural heart, no matter how badly
damaged or diseased it may be, to continue contributing to the required
cardiac output whenever possible so that ventricular hemodynamics are
disturbed as little as possible. This points away from the use of total
cardiac replacements and suggests the use of "assist" devices whenever
possible. However, the use of assist devices also poses a very
difficult problem: in patients suffering from severe heart disease,
temporary or intermittent crises often require artificial pumps to
provide "bridging" support which is sufficient to entirely replace
ventricular pumping capacity for limited periods of time, such as in
the hours or days following a heart attack or cardiac arrest, or during
periods of severe tachycardia or fibrillation."
[0402] U.S. Pat. No. 5,702,430 also discloses that
"Accordingly, an important goal during development of the described
method of pump implantation and use and of the surgically implantable
reciprocating pump was to design a method and a device which could
cover a wide spectrum of requirements by providing two different and
distinct functions. First, an ideal cardiac pumping device should be
able to provide "total" or "complete" pumping support which can keep
the patient alive for brief or even prolonged periods, if the patient's
heart suffers from a period of total failure or severe inadequacy.
Second, in addition to being able to provide total pumping support for
the body during brief periods, the pump should also be able to provide
a limited "assist" function. It should be able to interact with a
beating heart in a cooperative manner, with minimal disruption of the
blood flow generated by the natural heartbeat. If a ventricle is still
functional and able to contribute to cardiac output, as is the case in
the overwhelming majority of clinical applications, then the pump will
assist or augment the residual cardiac output. This allows it to take
advantage of the natural, non-hemolytic pumping action of the heart to
the fullest extent possible; it minimizes red blood cell lysis, it
reduces mechanical stress on the pump, and it allows longer pump life
and longer battery life."
[0403] "Several types of surgically implantable
blood pumps containing a piston-like member have been developed to
provide a mechanical device for augmenting or even totally replacing
the blood pumping action of a damaged or diseased mammalian heart."
[0404] "U.S. Pat. No. 3,842,440 to Karlson
discloses an implantable linear motor prosthetic heart and control
system containing a pump having a piston-like member which is
reciprocal within a magnetic field. The piston-like member includes a
compressible chamber in the prosthetic heart which communicates with
the vein or aorta."
[0405] U.S. Pat. No. 5,702,430 also discloses that
"U.S. Pat. Nos. 3,911,897 and 3,911,898 to Leachman, Jr. disclose heart
assist devices controlled in the normal mode of operation to copulsate
and counterpulsate with the heart, respectively, and produce a blood
flow waveform corresponding to the blood flow waveform of the heart
being assisted. The heart assist device is a pump connected serially
between the discharge of a heart ventricle and the vascular system. The
pump may be connected to the aorta between the left ventricle discharge
immediately adjacent the aortic valve and a ligation in the aorta a
short distance from the discharge. This pump has coaxially aligned
cylindrical inlet and discharge pumping chambers of the same diameter
and a reciprocating piston in one chamber fixedly connected with a
reciprocating piston of the other chamber. The piston pump further
includes a passageway leading between the inlet and discharge chambers
and a check valve in the passageway preventing flow from the discharge
chamber into the inlet chamber. There is no flow through the movable
element of the piston."
[0406] U.S. Pat. No. 5,702,430 also discloses that
"U.S. Pat. No. 4,102,610 to Taboada et al. discloses a magnetically
operated constant volume reciprocating pump which can be used as a
surgically implantable heart pump or assist. The reciprocating member
is a piston carrying a tilting-disk type check valve positioned in a
cylinder. While a tilting disk valve results in less turbulence and
applied shear to surrounding fluid than a squeezed flexible sack or
rotating impeller, the shear applied may still be sufficiently
excessive so as to cause damage to red blood cells."
[0407] U.S. Pat. No. 5,702,430 also discloses that
"U.S. Pat. Nos. 4,210,409 and 4,375,941 to Child disclose a pump used
to assist pumping action of the heart having a piston movable in a
cylindrical casing in response to magnetic forces. A tilting-disk type
check valve carried by the piston provides for flow of fluid into the
cylindrical casing and restricts reverse flow. A plurality of
longitudinal vanes integral with the inner wall of the cylindrical
casing allow for limited reverse movement of blood around the piston
which may result in compression and additional shearing of red blood
cells. A second fixed valve is present in the inlet of the valve to
prevent reversal of flow during piston reversal."
[0408] U.S. Pat. No. 5,702,430 also discloses that
"U.S. Pat. No. 4,965,864 to Roth discloses a linear motor using
multiple coils and a reciprocating element containing permanent magnets
which is driven by microprocessor-controlled power semiconductors. A
plurality of permanent magnets is mounted on the reciprocating member.
This design does not provide for self-synchronization of the linear
motor in the event the stroke of the linear motor is greater than twice
the pole pitch on the reciprocating element. During start-up of the
motor, or if magnetic coupling is lost, the reciprocating element may
slip from its synchronous position by any multiple of two times the
pole pitch. As a result, a sensing arrangement must be included in the
design to detect the position of the piston so that the controller will
not drive it into one end of the closed cylinder. In addition, this
design having equal pole pitch and slot pitch results in a "jumpy"
motion of the reciprocating element along its stroke.
[0409] U.S. Pat. No. 5,702,430 also discloses that
"In addition to the piston position sensing arrangement discussed
above, the Roth design may also include a temperature sensor and a
pressure sensor as well as control circuitry responsive to the sensors
to produce the intended piston motion. For applications such as
implantable blood pumps where replacement of failed or malfunctioning
sensors requires open heart surgery, it is unacceptable to have a
linear motor drive and controller that relies on any such sensors. In
addition, the Roth controller circuit uses only NPN transistors thereby
restricting current flow to the motor windings to one direction only."
[0410] "U.S. Pat. No. 4,541,787 to Delong describes
a pump configuration wherein a piston containing a permanent magnet is
driven in a reciprocating fashion along the length of a cylinder by
energizing a sequence of coils positioned around the outside of the
cylinder. However, the coil and control system configurations disclosed
only allow current to flow through one individual winding at a time.
This does not make effective use of the magnetic flux produced by each
pole of the magnet in the piston. To maximize force applied to the
piston in a given direction, current must flow in one direction in the
coils surrounding the vicinity of the north pole of the permanent
magnet while current flows in the opposite direction in the coils
surrounding the vicinity of the south pole of the permanent magnet.
Further, during starting of the pump disclosed by Delong, if the
magnetic piston is not in the vicinity of the first coil energized, the
sequence of coils that are subsequently energized will ultimately
approach and repel the magnetic piston toward one end of the closed
cylinder. Consequently, the piston must be driven into the end of the
closed cylinder before the magnetic poles created by the external coils
can become coupled with the poles of the magnetic piston in
attraction."
[0411] U.S. Pat. No. 5,702,430 also discloses that
"U.S. Pat. No. 4,610,658 to Buchwald et al. discloses an implantable
fluid displacement peritoneovenous shunt system. The system comprises a
magnetically driven pump having a spool piston fitted with a disc flap
valve."
[0412] U.S. Pat. No. 5,702,430 also discloses that
"U.S. Pat. No. 5,089,017 to Young et al. discloses a drive system for
artificial hearts and left ventricular assist devices comprising one or
more implantable pumps driven by external electromagnets. The pump
utilizes working fluid, such as sulfur hexafluoride to apply pneumatic
pressure to increase blood pressure and flow rate."
[0413] U.S. Pat. No. 5,743,854 discloses a device
for inducing and localizing epileptiform activity that is comprised of
a direct current (DC) magnetic field generator, a DC power source, and
sensors adapted to be coupled to a patient's head; this direct current
magnetic field generator may be used in conjunction with the
anti-mitotic compound of this invention and/or an auxiliary device
and/or tubulin and/or microtubules. In one embodiment of the invention,
described in claim 7, the sensors " . . . comprise Foramen Ovale
electrodes adapted to be implanted to sense evoked and natural
epileptic firings."
[0414] U.S. Pat. No. 5,803,897 discloses a penile
prosthesis system comprised of an implantable pressurized chamber, a
reservoir, a rotary pump, a magnetically responsive rotor, and a rotary
magnetic field generator. Claim 1 of this patent describes: "A penile
prosthesis system comprising: at least one pressurizable chamber
including a fluid port, said chamber adapted to be located within the
penis of a patient for tending to make the penis rigid in response to
fluid pressure within said chamber; a fluid reservoir; a rotary pump
adapted to be implanted within the body of a user, said rotary pump
being coupled to said reservoir and to said chamber, said rotary pump
including a magnetically responsive rotor adapted for rotation in the
presence of a rotating magnetic field, and an impeller for tending to
pump fluid at least from said reservoir to said chamber under the
impetus of fluid pressure, to thereby pressurize said chamber in
response to operation of said pump; and a rotary magnetic field
generator for generating a rotating magnetic field, for, when placed
adjacent to the skin of said user at a location near said rotary pump,
rotating said magnetically responsive rotor in response to said
rotating magnetic field, to thereby tend to pressurize said chamber and
to render the penis rigid; controllable valve means operable in
response to motion of said rotor of said rotary pump, for tending to
prevent depressurization of said chamber when said rotating magnetic
field no longer acts on said rotor, said controllable valve means
comprising a unidirectional check valve located in the fluid path
extending between said rotary pump and said port of said chamber." Such
fluid pumping means may be used to facilitate the delivery of the
anti-mitotic compound of this invention.
[0415] U.S. Pat. No. 5,810,015 describes an
implantable power supply that can convert non-electrical energy (such
as mechanical, chemical, thermal, or nuclear energy) into electrical
energy; the entire disclosure of this United States patent is hereby
incorporated by reference into this specification. This power supply
may be used to supply energy to the anti-mitotic compound of this
invention and/or to tubulin and/or to microtubules.
[0416] In column 1 of U.S. Pat. No. 5,810,015, a
discussion of "prior art" rechargeable power supplies is presented. It
is disclosed in this column 1 that: "Modern medical science employs
numerous electrically powered devices which are implanted in a living
body. For example, such devices may be employed to deliver medications,
to support blood circulation as in a cardiac pacemaker or artificial
heart, and the like. Many implantable devices contain batteries which
may be rechargeable by transcutaneous induction of electromagnetic
fields in implanted coils connected to the batteries. Transcutaneous
inductive recharging of batteries in implanted devices is disclosed for
example in U.S. Pat. Nos. 3,923,060; 4,082,097; 4,143,661; 4,665,896;
5,279,292; 5,314,453; 5,372,605, and many others."
[0417] U.S. Pat. No. 5,810,015 also discloses that:
"Other methods for recharging implanted batteries have also been
attempted. For example, U.S. Pat. No.4,432,363 discloses use of light
or heat to power a solar battery within an implanted device. U.S. Pat.
No. 4,661,107 discloses recharging of a pacemaker battery using
mechanical energy created by motion of an implanted heart valve." These
"other methods" may also be used in the process of this invention.
[0418] U.S. Pat. No. 5,810,015 also discloses that:
"A number of implanted devices have been powered without batteries.
U.S. Pat. Nos. 3,486,506 and 3,554,199 disclose generation of electric
pulses in an implanted device by movement of a rotor in response to the
patient's heartbeat. U.S. Pat. No. 3,563,245 discloses a miniaturized
power supply unit which employs mechanical energy of heart muscle
contractions to generate electrical energy for a pacemaker. U.S. Pat.
No. 3,456,134 discloses a piezoelectric converter for electronic
implants in which a piezoelectric crystal is in the form of a weighted
cantilever beam capable of responding to body movement to generate
electric pulses. U.S. Pat. No. 3,659,615 also discloses a piezoelectric
converter which reacts to muscular movement in the area of
implantation. U.S. Pat. No. 4,453,537 discloses a pressure actuated
artificial heart powered by a second implanted device attached to a
body muscle which in turn is stimulated by an electric signal generated
by a pacemaker." These "other devices" may also be used in the process
of this invention.
[0419] U.S. Pat. No. 5,810,015 also discloses that:
"In spite of all these efforts, a need remains for efficient generation
of energy to supply electrically powered implanted devices." The
solution provided by U.S. Pat. No. 5,80,015 is described in claim 1
thereof, which describes: "An implantable power supply apparatus for
supplying electrical energy to an electrically powered device,
comprising: a power supply unit including: a transcutaneously,
invasively rechargeable non-electrical energy storage device (NESD); an
electrical energy storage device (EESD); and an energy converter
coupling said NESD and said EESD, said converter including means for
converting non-electrical energy stored in said NESD to electrical
energy and for transferring said electrical energy to said EESD,
thereby storing said electrical energy in said EESD."
[0420] An implantable ultrasound communicaton
system is disclosed in U.S. Pat. No. 5,861,018, the entire disclosure
of which is hereby incorporated by reference into this specification.
As is disclosed in the abstract of this patent, there is disclosed in
such patent "A system for communicating through the skin of a patient,
the system including an internal communication device implanted inside
the body of a patient and an external communication device. The
external communication device includes an external transmitter which
transmits a carrier signal into the body of the patient during
communication from the internal communication device to the external
communication device. The internal communication device includes an
internal modulator which modulates the carrier signal with information
by selectively reflecting the carrier signal or not reflecting the
carrier signal. The external communication device demodulates the
carrier signal by detecting when the carrier signal is reflected and
when the carrier signal is not reflected through the skin of the
patient. When the reflected carrier signal is detected, it is
interpreted as data of a first state, and when the reelected carrier
signal is not detected, it is interpreted as data of a second state.
Accordingly, the internal communication device consumes relatively
little power because the carrier signal used to carry the information
is derived from the external communication device. Further, transfer of
data is also very efficient because the period needed to modulate
information of either the first state or the second state onto the
carrier signal is the same. In one embodiment, the carrier signal
operates in the ultrasound frequency range."
[0421] U.S. Pat. No. 5,861,019, the entire
disclosure of which is hereby incorporated by reference into this
specification, discloses a telemetry system for communications between
an external programmer and an implantable medical device. Claim 1 of
this patent describes: "A telemetry system for communications between
an external programmer and an implantable medical device,
comprising:the external programmer comprising an external telemetry
antenna and an external transceiver for receiving uplink telemetry
transmissions and transmitting downlink telemetry transmission through
the external telemetry antenna; the implantable medical device
comprising an implantable medical device housing, an implantable
telemetry antenna and an implantable transceiver for receiving downlink
transmissions and for transmitting uplink telemetry transmission
through the implantable telemetry antenna, the implantable medical
device housing being formed of a conductive metal and having an
exterior housing surface and an interior housing surface; the
implantable medical device housing being formed with a housing recess
extending inwardly from the exterior housing surface to a predetermined
housing recess depth in the predetermined substrate area of the
exterior housing surface for receiving the dielectric substrate
therein; wherein the implantable telemetry antenna is a conformal
microstrip antenna formed as part of the implantable medical device
housing, the microstrip antenna having electrically conductive ground
plane and radiator patch layers separated by a dielectric substrate,
layer the conductive radiator patch layer having a predetermined
thickness and predetermined radiator patch layer dimensions, the patch
layer being formed upon one side of the dielectric substrate layer."
[0422] "An extensive description of the historical
development of uplink and downlink telemetry transmission formats" is
set forth at columns 2 through 5 of U.S. Pat. No. 5,861,019; such
telemetry transmission formats may be used in conjunction with the
anti-mitotic compound of this invention. As is disclosed in these
columns: "An extensive description of the historical development of
uplink and downlink telemetry transmission formats and is set forth in
the above-referenced '851 and '963 applications and in the following
series of commonly assigned patents all of which are incorporated
herein by reference in their entireties. Commonly assigned U.S. Pat.
No. 5,127,404 to Grevious et al. sets forth an improved method of frame
based, pulse position modulated (PPM) of data particularly for uplink
telemetry. The frame-based PPM telemetry format increases bandwidth
well above simple PIM or pulse width modulation (PWM) binary bit stream
transmissions and thereby conserves energy of the implanted medical
device. Commonly assigned U.S. Pat. No. 5,168,871 to Grevious et al.
sets forth an improvement in the telemetry system of the '404 patent
for detecting uplink telemetry RF pulse bursts that are corrupted in a
noisy environment. Commonly assigned U.S. Pat. No. 5,292,343 to
Blanchette et al. sets forth a further improvement in the telemetry
system of the '404 patent employing a hand shake protocol for
maintaining the communications link between the external programmer and
the implanted medical device despite instability in holding the
programmer RF head steady during the transmission. Commonly assigned
U.S. Pat. No. 5,324,315 to Grevious sets forth an improvement in the
uplink telemetry system of the '404 patent for providing feedback to
the programmer to aid in optimally positioning the programmer RF head
over the implanted medical device. Commonly assigned U.S. Pat. No.
5,117,825 to Grevious sets forth a further improvement in the
programmer RF head for regulating the output level of the magnetic H
field of the RF head telemetry antenna using a signal induced in a
sense coil in a feedback loop to control gain of an amplifier driving
the RF head telemetry antenna. Commonly assigned U.S. Pat. No.
5,562,714 to Grevious sets forth a further solution to the regulation
of the output level of the magnetic H field generated by the RF head
telemetry antenna using the sense coil current to directly load the H
field. Commonly assigned U.S. Pat. No. 5,354,319 to Wybomey et al. sets
forth a number of further improvements in the frame based telemetry
system of the '404 patent. Many of these improvements are incorporated
into MEDTRONIC.RTM. Model 9760, 9766 and 9790 programmers. These
improvements and the improvements described in the above-referenced
pending patent applications are directed in general to increasing the
data transmission rate, decreasing current consumption of the battery
power source of the implantable medical device, and increasing
reliability of uplink and downlink telemetry transmissions."
[0423] U.S. Pat. No. 5,810,015 also discloses that:
"The current MEDTRONIC.RTM. telemetry system employing the 175 kHz
carrier frequency limits the upper data transfer rate, depending on
bandwidth and the prevailing signal-to-noise ratio. Using a ferrite
core, wire coil, RF telemetry antenna results in: (1) a very low
radiation efficiency because of feed impedance mismatch and ohmic
losses; 2) a radiation intensity attenuated proportionally to at least
the fourth power of distance (in contrast to other radiation systems
which have radiation intensity attenuated proportionally to square of
distance); and 3) good noise immunity because of the required close
distance between and coupling of the receiver and transmitter RF
telemetry antenna fields."
[0424] U.S. Pat. No. 5,810,015 also discloses that
"These characteristics require that the implantable medical device be
implanted just under the patient's skin and preferably oriented with
the RF telemetry antenna closest to the patient's skin. To ensure that
the data transfer is reliable, it is necessary for the patient to
remain still and for the medical professional to steadily hold the RF
programmer head against the patient's skin over the implanted medical
device for the duration of the transmission. If the telemetry
transmission takes a relatively long number of seconds, there is a
chance that the programmer head will not be held steady. If the uplink
telemetry transmission link is interrupted by a gross movement, it is
necessary to restart and repeat the uplink telemetry transmission. Many
of the above-incorporated, commonly assigned, patents address these
problems."
[0425] U.S. Pat. No. 5,810,015 also discloses that
"The ferrite core, wire coil, RF telemetry antenna is not
bio-compatible, and therefore it must be placed inside the medical
device hermetically sealed housing. The typically conductive medical
device housing adversely attenuates the radiated RF field and limits
the data transfer distance between the programmer head and the
implanted medical device RF telemetry antennas to a few inches."
[0426] U.S. Pat. No. 5,810,015 also discloses that
"In U.S. Pat. No. 4,785,827 to Fischer, U.S. Pat. No. 4,991,582 to
Byers et al., and commonly assigned U.S. Pat. No. 5,470,345 to Hassler
et al. (all incorporated herein by reference in their entireties), the
metal can typically used as the hermetically sealed housing of the
implantable medical device is replaced by a hermetically sealed ceramic
container. The wire coil antenna is still placed inside the container,
but the magnetic H field is less attenuated. It is still necessary to
maintain the implanted medical device and the external programming head
in relatively close proximity to ensure that the H field coupling is
maintained between the respective RF telemetry antennas."
[0427] U.S. Pat. No. 5,810,015 also discloses that:
"Attempts have been made to replace the ferrite core, wire coil, RF
telemetry antenna in the implantable medical device with an antenna
that can be located outside the hermetically sealed enclosure. For
example, a relatively large air core RF telemetry antenna has been
embedded into the thermoplastic header material of the MEDTRONIC.RTM.
Prometheus programmable IPG. It is also suggested that the RF telemetry
antenna may be located in the IPG header in U.S. Pat. No. 5,342,408.
The header area and volume is relatively limited, and body fluid may
infiltrate the header material and the RF telemetry antenna."
[0428] U.S. Pat. No. 5,810,015 also discloses that:
"In U.S. Pat. Nos. 5,058,581 and 5,562,713 to Silvian, incorporated
herein by reference in their entireties, it is proposed that the
elongated wire conductor of one or more medical lead extending away
from the implanted medical device be employed as an RF telemetry
antenna. In the particular examples, the medical lead is a cardiac lead
particularly used to deliver energy to the heart generated by a pulse
generator circuit and to conduct electrical heart signals to a sense
amplifier. A modest increase in the data transmission rate to about 8
Kb/s is alleged in the '581 and '713 patents using an RF frequency of
10-300 MHz. In these cases, the conductor wire of the medical lead can
operate as a far field radiator to a more remotely located programmer
RF telemetry antenna. Consequently, it is not necessary to maintain a
close spacing between the programmer RF telemetry antenna and the
implanted cardiac lead antenna or for the patient to stay as still as
possible during the telemetry transmission."
[0429] U.S. Pat. No. 5,810,015 also discloses that:
"However, using the medical lead conductor as the RF telemetry antenna
has several disadvantages. The radiating field is maintained by current
flowing in the lead conductor, and the use of the medical lead
conductor during the RF telemetry transmission may conflict with
sensing and stimulation operations. RF radiation losses are high
because the human body medium is lossy at higher RF frequencies. The
elongated lead wire RF telemetry antenna has directional radiation
nulls that depend on the direction that the medical lead extends, which
varies from patient to patient. These considerations both contribute to
the requirement that uplink telemetry transmission energy be set
artificially high to ensure that the radiated RF energy during the RF
uplink telemetry can be detected at the programmer RF telemetry
antenna. Moreover, not all implantable medical devices have lead
conductor wires extending from the device."
[0430] U.S. Pat. No. 5,810,015 also discloses that:
"A further U.S. Pat. No. 4,681,111 to Silvian, incorporated herein by
reference in its entirety, suggests the use of a stub antenna
associated with the header as the implantable medical device RF
telemetry antenna for high carrier frequencies of up to 200 MHz and
employing phase shift keying (PSK) modulation. The elimination of the
need for a VCO and a bit rate on the order of 2-5% of the carrier
frequency or 3.3-10 times the conventional bit rate are alleged."
[0431] U.S. Pat. No. 5,810,015 also discloses that:
"At present, a wide variety of implanted medical devices are
commercially released or proposed for clinical implantation. Such
medical devices include implantable cardiac pacemakers as well as
implantable cardioverter-defibrillators,
pacemaker-cardioverter-defibrillators, drug delivery pumps,
cardiomyostimulators, cardiac and other physiologic monitors, nerve and
muscle stimulators, deep brain stimulators, cochlear implants,
artificial hearts, etc. As the technology advances, implantable medical
devices become ever more complex in possible programmable operating
modes, menus of available operating parameters, and capabilities of
monitoring increasing varieties of physiologic conditions and
electrical signals which place ever increasing demands on the
programming system."
[0432] U.S. Pat. No. 5,810,015 also discloses that:
"It remains desirable to minimize the time spent in uplink telemetry
and downlink transmissions both to reduce the likelihood that the
telemetry link may be broken and to reduce current consumption."
[0433] "Moreover, it is desirable to eliminate the
need to hold the programmer RF telemetry antenna still and in proximity
with the implantable medical device RF telemetry antenna for the
duration of the telemetry transmission. As will become apparent from
the following, the present invention satisfies these needs."
[0434] The solution to this problem is presented,
e.g., in claim 1 of U.S. Pat. No. 5,861,019. This claim describes "A
telemetry system for communications between an external programmer and
an implantable medical device, comprising:the external programmer
comprising an external telemetry antenna and an external transceiver
for receiving uplink telemetry transmissions and transmitting downlink
telemetry transmission through the external telemetry antenna; the
implantable medical device comprising an implantable medical device
housing, an implantable telemetry antenna and an implantable
transceiver for receiving downlink transmissions and for transmitting
uplink telemetry transmission through the implantable telemetry
antenna, the implantable medical device housing being formed of a
conductive metal and having an exterior housing surface and an interior
housing surface; the implantable medical device housing being formed
with a housing recess extending inwardly from the exterior housing
surface to a predetermined housing recess depth in the predetermined
substrate area of the exterior housing surface for receiving the
dielectric substrate therein; wherein the implantable telemetry antenna
is a conformal microstrip antenna formed as part of the implantable
medical device housing, the microstrip antenna having electrically
conductive ground plane and radiator patch layers separated by a
dielectric substrate, layer the conductive radiator patch layer having
a predetermined thickness and predetermined radiator patch layer
dimensions, the patch layer being formed upon one side of the
dielectric substrate layer."
[0435] U.S. Pat. No. 5,945,762, the entire
disclosure of which is hereby incorporated by reference into this
specification, discloses an external transmitter adapted to
magnetically excite an implanted receiver coil; such an implanted
receiver coil may be disposed near, e.g., the anti-mitotic compound of
this invention and/or other devices and/or tubulin and/or microtubules.
Claim 1 of this patent describes "An external transmitter adapted for
magnetically exciting an implanted receiver coil, causing an electrical
current to flow in the implanted receiver coil, comprising: (a) a
support; (b) a magnetic field generator that is mounted to the support;
and (c) a prime mover that is drivingly coupled to an element of the
magnetic field generator to cause said element of the magnetic field
generator to reciprocate, in a reciprocal motion, said reciprocal
motion of said element of the magnetic field generator producing a
varying magnetic field that is adapted to induce an electrical current
to flow in the implanted receiver coil."
[0436] U.S. Pat. No. 5,954,758, the entire
disclosure of which is hereby incorporated by reference into this
specification, claims an implantable electrical stimulator comprised of
an implantable radio frequency receiving coil, an implantable power
supply, an implantable input signal generator, an implantable decoder,
and an implantable electrical stimulator. Claim 1 of this patent
describes "A system for transcutaneously telemetering position signals
out of a human body and for controlling a functional electrical
stimulator implanted in said human body, said system comprising: an
implantable radio frequency receiving coil for receiving a
transcutaneous radio frequency signal; an implantable power supply
connected to said radio frequency receiving coil, said power supply
converting received transcutaneous radio frequency signals into
electromotive power; an implantable input signal generator electrically
powered by said implantable power supply for generating at least one
analog input movement signal to indicate voluntary bodily movement
along an axis; an implantable encoder having an input operatively
connected with said implantable input signal generator for encoding
said movement signal into output data in a preselected data format; an
impedance altering means connected with said encoder and said
implantable radio frequency signal receiving coil to selectively change
an impedance of said implantable radio frequency signal receiving coil;
an external radio frequency signal transmit coil inductively coupled
with said implantable radio frequency signal receiving coil, such that
impedance changes in said implantable radio frequency signal receiving
coil are sensed by said external radio frequency signal transmit coil
to establish a sensed modulated movement signal in said external
transmit coil; an external control system electrically connected to
said external radio frequency transmit coil for monitoring said sensed
modulated movement signal in said external radio frequency transmit
coil, said external control system including: a demodulator for
recovering the output data of said encoder from the sensed modulated
ovement signal of said external transmit coil, a pulse width algorithm
means for applying a preselected pulse width algorithm to the recovered
output data to derive a first pulse width,an amplitude algorithm means
for applying an amplitude algorithm to the recovered output data to
derive a first amplitude therefrom, an interpulse interval algorithm
means for applying an interpulse algorithm to the recovered output data
to derive a first interpulse interval therefrom; and,a stimulation
pulse train signal generator for generating a stimulus pulse train
signal which has the first pulse width and the first pulse amplitude;an
implantable functional electrical stimulator for receiving said
stimulation pulse train signal from said stimulation pulse train signal
generator and generating stimulation pulses with the first pulse width,
the first pulse amplitude, and separated by the first interpulse
interval; and, at least one electrode operatively connected with the
functional electrical stimulator for applying said stimulation pulses
to muscle tissue of said human body."
[0437] U.S. Pat. No. 6,006,133, the entire
disclosure of which is hereby incorporated by reference into this
specification, describes an implantable medical device comprised of a
hermetically sealed housing." Such a hermetically sealed housing may be
used to contain, e.g., the anti-mitotic compound of this invention.
[0438] U.S. Pat. No. 6,083,166, the entire
disclosure of which is hereby incorporated by reference into this
specification, discloses an ultrasound transmitter for use with a
surgical device. This ultrasound transmitter may be used, e.g., to
affect the anti-mitotic compound of this invention and/or tubulin
and/or microtubules.
[0439] U.S. Pat. No. 6,152,882, the entire
disclosure of which is hereby incorporated by reference into this
specification, discloses an implantable electroporation unit, an
implantable proble electrode, an implantable reference electrode, and
an an amplifier unit; this electroporation unit may be used to treat,
e.g., cancer cells in conjunction with the anti-mitotic compound of
this invention. Claim 35 of this patent describes: "Apparatus for
measurement of monophasic action potentials from an excitable tissue
including a plurality of cells, the apparatus comprising: at least one
probe electrode placeable adjacent to or in contact with a portion of
said excitable tissue; at least one reference electrode placeable
proximate said at least one probe electrode; an electroporating unit
electrically connected to said at least one probe electrode and said at
least one reference electrode for controllably applying to at least
some of said cells subjacent said at least one probe electrode
electrical current pulses suitable for causing electroporation of cell
membranes of said at least some of said cells; and an amplifier unit
electrically connected to said at least one probe electrode and to said
at least one reference electrode for providing an output signal
representing the potential difference between said probe electrode and
said reference electrode"
[0440] U.S. Pat. No. 6,169,925, the entire
disclosure of which is hereby incorporated by reference into this
specification, describes a transceiver for use in communication with an
implantable medical device. Claim 1 of this patent describes: "An
external device for use in communication with an implantable medical
device, comprising: a device controller; a housing; an antenna array
mounted to the housing; an RF transceiver operating at defined
frequency, coupled to the antenna array; means for encoding signals to
be transmitted to the implantable device, coupled to an input of the
transceiver; means for decoding signals received from the implantable
device, coupled to an output of the transceiver; and means for
displaying the decoded signals received from the implantable device;
wherein the antenna array comprises two antennas spaced a fraction of
the wavelength of the defined frequency from one another, each antenna
comprising two antenna elements mounted to the housing and located
orthogonal to one another; and wherein the device controller includes
means for selecting which of the two antennas is coupled to the
transceiver." Such a transceiver, in combination with an implantable
sensor, may be used in conjunction with the anti-mitotic compound of
this invention and/or tubulin and/or microtubules and/or one or more
other implanted devices.
[0441] U.S. Pat. No. 6,185,452, the entire
disclosure of which is hereby incorporated by reference into this
specification, claims a device for stimulating internal tissue, wherein
such device is comprised of: "a sealed elongate housing configured for
implantation in said patient's body, said housing having an axial
dimension of less than 60 mm and a lateral dimension of less than 6 mm;
power consuming circuitry carried by said housing including at least
one electrode extending externally of said housing, said power
consuming circuitry including a capacitor and pulse control circuitry
for controlling (1) the charging of said capacitor and (2) the
discharging of said capacitor to produce a current pulse through said
electrode; a battery disposed in said housing electrically connected to
said power consuming circuitry for powering said pulse control
circuitry and charging said capacitor, said battery having a capacity
of at least one microwatt-hour; an internal coil and a charging circuit
disposed in said housing for supplying a charging current to said
battery; an external coil adapted to be mounted outside of said
patient's body; and means for energizing said external coil to generate
an alternating magnetic field for supplying energy to said charging
circuit via said internal coil." Such capacitative discharge energy may
be used to affect either the anti-mitotic compound of this invention
and/or tubulin and/or microtubules.
[0442] U.S. Pat. No. 6,235,024, the entire
disclosure of which is hereby incorporated by reference into this
specification, discloses an implantable high frequency energy
generator; such high-frequency energy may be used to affect either the
anti-mitotic compound of this invention, tubulin, microtubules, and/or
one or more other implanted devices. Claim 1 of this patent describes:
"A catheter system comprising: an elongate catheter tubing having a
distal section, a distal end, a proximal end, and at least one lumen
extending between the distal end and the proximal end; a handle
attached to the proximal end of said elongate catheter tubing, wherein
the handle has a cavity; an ablation element mounted at the distal
section of the elongate catheter tubing, the ablation element having a
wall with an outer surface and an inner surface, wherein the outer
surface is covered with an outer member made of a first electrically
conductive material and the inner surface is covered with an inner
member made of a second electrically conductive material, and wherein
the wall comprises an ultrasound transducer; an electrical conducting
means having a first and a second electrical wires, wherein the first
electrical wire is coupled to the outer member and the second
electrical wire is coupled to the inner member of the ablation element;
and a high frequency energy generator means for providing a
radiofrequency energy to the ablation element through a first
electrical wire of the electrical conducting means."
[0443] An implantable light-generating apparatus is
described in claim 16 of U.S. Pat. No. 6,363,279, the entire disclosure
of which is hereby incorporated by reference into this specification.
In one embodiment, the compound of this invention is comprised of a
photolytic linker which is caused to disassociate upon being exposed to
specified light energy. As is disclosed in such claim 16, this patent
provides a "Heart control apparatus, comprising circuitry for
generating a non-excitatory stimulus, and stimulus application devices
for applying to a heart or to a portion thereof said non-excitatory
stimulus, wherein the circuitry for generating a non-excitatory
stimulus generates a stimulus which is unable to generate a propagating
action potential and wherein said circuitry comprises a
light-generating apparatus for generating light."
[0444] An implantable ultrasound probe is described
in claim 1 of U.S. Pat. No. 6,421,565, the entire disclosure of which
is hereby incorporated by reference into this specification. Such
ultrasound may be used, e.g., to treat the microtubules of cancer
cells; and this treatment may be combined, e.g., with the anti-mitotic
compounds of this invention.
[0445] Claim 1 of U.S. Pat. No. 6,421,565
describes: "An implantable cardiac monitoring device comprising: an
A-mode ultrasound probe adapted for implantation in a right ventricle
of a heart, said ultrasound probe emitting an ultrasound signal and
receiving at least one echo of said ultrasound signal from at least one
cardiac segment of the left ventricle; a unit connected to said
ultrasound probe for identifying a time difference between emission of
said ultrasound signal and reception of said echo and, from said time
difference, determining a position of said cardiac segment, said
cardiac segment having a position which, at least when reflecting said
ultrasound signal, is correlated to cardiac performance, and said unit
deriving an indication of said cardiac performance from said position
of said cardiac segment."
[0446] An implantable stent that contains a tube
and several optical emitters located on the inner surface of the tube
is disclosed in U.S. Pat. No. 6,488,704, the entire disclosure of which
is hereby incorporated by reference into this specification. One may
use one or more of the implantable devices described in U.S. Pat. No.
6,488,704 together with the anti-mitotic compound of this invention
and/or tubulin and/or microtubules and/or another in vivo device.
[0447] Claim 1 of U.S. Pat. No. 6,488,704 describes
"1. An implantable stent which comprises: (a) a tube comprising an
inner surface and an outer surface, and (b) a multiplicity of optical
radiation emitting means adapted to emit radiation with a wavelength
from about 30 nanometers to about 30 millimeters, and a multiplicity of
optical radiation detecting means adapted to detect radiation with a
wavelength of from about 30 nanometers to about 30 millimeters, wherein
said optical radiation emitting means and said optical radiation
detecting means are disposed on the inside surface of said tube."
[0448] Many other implantable devices and
configurations are described in the claims of U.S. Pat. No. 6,488,704.
These devices and configurations may be used in conjunction with the
anti-mitotic compound of this invention, and/or tubulin, and/or
microtubules, and/or other auxiliary, implanted device.
[0449] Thus, e.g., claim 2 of U.S. Pat. No.
6,488,704 discloses that the " . . . implantable stent is comprised of
a flexible casing with an inner surface and an outer surface." claim 3
of such patent discloses that the case may be " . . . comprised of
fluoropolymer." claim 4 of such patent discloses that the casing may be
" . . . optically impermeable."
[0450] Thus, e.g., claim 10 of U.S. Pat. No.
6,488,704 discloses an embodiment in which an implantable stent
contains " . . . telemetry means for transmitting a signal to a
receiver located external to said implantable stent." The telemetry
means may be adapted to receive " . . . a signal from a transmitter
located external to said implantable stent (see claim 11); and such
signal may be a radio-frequency signal (see claims 12 and 13). The
implantable stent may also comprise " . . . telemetry means for
transmitting a signal to a receiver located external to said
implantable stent" (see claim 22), and/or " . . . . telemetry means for
receiving a signal from a transmitter located external to said
implantable stent" (see claim 23), and/or " . . . a controller
operatively connected to said means for transmitting a signal to said
receiver, and operatively connected to said means for receiving a
signal from said transmitter" (see claim 24).
[0451] Thus, e.g., claim 14 of U.S. Pat. No.
6,488,704 describes an implantable stent that contains a waveguide
array. The waveguide array may contain " . . . a flexible optical
waveguide device" (see claim 15), and/or " . . . means for transmitting
optical energy in a specified configuration" (see claim 16), and/or " .
. . a waveguide interface for receiving said optical energy transmitted
in said specified configuration by said waveguide array" (see claim
17), and/ or " . . . means for filtering specified optical frequencies"
(see claim 18). The implantable stent may be comprised of " . . . means
for receiving optical energy from said waveguide array" (see claim 19),
and/or " . . . means for processing said optical energy received from
waveguide array" (see claim 20). The implantable stent may comprise " .
. . means for processing said radiation emitted by said optical
radiation emitting means adapted with a wavelength from about 30
nanometers to about 30 millimeters" (see claim 21).
[0452] The implantable stent of U.S. Pat. No.
6,488,404 may be comprised of implantable laser devices. Thus, e.g.,
and referring again to U.S. Pat. No. 6,488,704, the implantable stent
may be comprised of " . . . a multiplicity of vertical cavity surface
emitting lasers and photodetectors arranged in a monolithic
configuration" (see claim 27), wherein " . . . said monolithic
configuration further comprises a multiplicity of optical drivers
operatively connected to said vertical cavity surface emitting lasers"
(see claim 28) and/or wherein " . . . said vertical cavity surface
emitting lasers each comprise a multiplicity of distributed Bragg
reflector layers" (see claim 29), and/or wherein " . . . each of said
photodetectors comprises a multiplicity of distributed Bragg reflector
layers" (see claim 30), and/or wherein " . . . each of said vertical
cavity surface emitting lasers is comprised of an emission layer
disposed between a first distributed Bragg reflector layer and a second
distributed Bragg reflector layer" (see claim 31), and/or wherein " . .
. said emission layer is comprised of a multiplicity of quantum well
structures" (see claim 32), and/or wherein " . . . each of said
photodetectors is comprised of an absorption layer disposed between a
first distributed Bragg reflector layer and a second distributed Bragg
reflector layer" (see claim 33), and/or wherein " . . . each of said
vertical cavity surface emitting lasers and photodetectors is disposed
on a separate semiconductor substrate" (see claim 34), and/or wherein "
. . . said semiconductor substrate comprises gallium arsenide." These
devices may advantageously be used in the process of this invention.
[0453] Referring again to U.S. Pat. No. 6,488,704,
the entire disclosure of which is hereby incorporated by reference into
this specification, the implantable stent may be comprised of an
arithmetic unit (see claim 37 of such patent), and such arithmetic unit
may be " . . . comprised of means for receiving signals from said
optical radiation detecting means" (see claim 38), and/or " . . . means
for calculating the concentration of components in an analyte disposed
within said implantable stent (see claim 39). In one embodiment, "said
means for calculating the concentration of components in said analyte
calculates concentrations of said components in said analyte based upon
optimum optical path lengths for different wavelengths and values of
transmitted light (see claim 40).
[0454] Referring again to U.S. Pat. No. 6,488,704,
the implantable stent may contain a power supply (see claim 41 thereof)
which may contain a battery (see claim 42) which, in one embodiment, is
a lithium-iodine battery (see claim 43).
[0455] U.S. Pat. No. 6,585,763, the entire
disclosure of which is hereby incorporated by reference into this
specification, describes in its claim 1" . . . a vascular graft
comprising: a biocompatible material formed into a shape having a
longitudinal axis to enclose a lumen disposed along said longitudinal
axis of said shape, said lumen positioned to convey fluid through said
vascular graft; a first transducer coupled to a wall of said vascular
graft; and an implantable circuit for receiving electromagnetic
signals, said implantable circuit coupled to said first transducer,
said first transducer configured to receive a first energy from said
circuit to emit a second energy having one or more frequencies and
power levels to alter said biological activity of said medication in
said localized area of said body subsequent to implantation of said
first transducer in said body near said localized area." One may use
the means for " . . . altering said biological activity of said
medication . . . " in the process of this invention. The transducer may
be selected from the group consisting of " . . . an ultrasonic
transducer, a plurality of light sources, an electric field transducer,
an electromagnetic transducer, and a resistive heating transducer" (see
claim 2), it may comprise a coil (see claim 3), it may comprise " . . .
a regular solid including piezoelectric material, and wherein a first
resonance frequency, being of said one or more frequencies, is
determined by a first dimension of said regular solid and a second
resonance frequency, being of said one or more frequencies, is
determined by a second dimension of said regular solid and further
including a first electrode coupled to said regular solid and a second
electrode coupled to said regular solid" (see claim 4).
[0456] U.S. Pat. No. 6,605,089, the entire
disclosure of which is hereby incorporated by reference into this
specification, discloses an implantable bone growth promoting device.
Claim 1 of this patent describes "A device for placement into and
between at least two adjacent bone masses to promote bone growth
therebetween, said device comprising: an implant having opposed first
and second surfaces for placement between and in contact with the
adjacent bone masses, a mid-longitudinal axis, and a hollow chamber
between said first and second surfaces, said hollow chamber being
adapted to hold bone growth promoting material, said hollow chamber
being along at least a portion of the mid-longitudinal axis of said
implant, each of said first and second surfaces having at least one
opening in communication with said hollow chamber into which bone from
the adjacent bone masses grows; and an energizer for energizing said
implant, said energizer being sized and configured to promote bone
growth from adjacent bone mass to adjacent bone mass through said first
and second surfaces and through at least a portion of said hollow
chamber at the mid-longitudinal axis." The implant may have a coil
wrapped around it (see claim 6), a portion of the coil may be " . . .
in the form of an external thread on at least a portion of said first
and second surfaces of said implant" (see claim 7), the "external
thread" may be energized by the "energizer" (claim 8) by conducting " .
. . electromagnetic energy to said interior space . . . " of the
energizer (claim 9). One may use such "energizer" in the process of
this invention.
[0457] Referring again to U.S. Pat. No. 6,605,089,
and to the implant claimed therein, the implant may contain " . . . a
power supply delivering an electric charge" (see claim 14), and it may
comprise " . . . a first portion that is electrically conductive for
delivering said electrical charge to at least a portion of the adjacent
bone masses and said energizer delivers negative electrical charge to
said first portion of said implant" (see claim 15). Additionally, the
implant may also contain " . . . a controller for controlling the
delivery of said electric charge" that is disposed within the implant
(see claim 18), that " . . . includes one of a wave form generator and
a voltage generator" (see claim 19), and that " . . . . provides for
the delivery of one of an alternating current, a direct current, and a
sinusoidal current" (see claim 21).
[0458] U.S. Pat. No. 6,641,520, the entire
disclosure of which is hereby incorporated by reference into this
specification, discloses a magnetic field generator for providing a
static or direct current magnetic field generator; the magnetic field
generator described in this patent may be used in conjunction the
anti-mitotic compound and/or tubulin and/or microtubules. In column 1
of this patent, some "prior art" magnetic field generators were
described; and they also may be so used. It was stated in such column 1
that: "There has recently been an increased interest in therapeutic
application of magnetic fields. There have also been earlier efforts of
others in this area. The recent efforts, as well as those earlier made,
can be categorized into three general types, based on the mechanism for
generating and applying the magnetic field. The first type was what
could be generally referred to as systemic applications. These were
large, tubular mechanisms which could accommodate a human body within
them. A patient or recipient could thus be subjected to magnetic
therapy through their entire body. These systems were large, cumbersome
and relatively immobile. Examples of this type of therapeutic systems
included U.S. Pat. Nos. 1,418,903; 4,095,588; 5,084,003; 5,160,591; and
5,437,600. A second type of system was that of magnetic therapeutic
applicator systems in the form of flexible panels, belts or collars,
containing either electromagnets or permanent magnets. These applicator
systems could be placed on or about portion of the recipient's body to
allow application of the magnetic therapy. Because of their close
proximity to the recipient's body, considerations limited the amount
and time duration of application of magnetic therapy. Examples of this
type system were U.S. Pat. Nos. 4,757,804; 5,084,003 and 5,344,384. The
third type of system was that of a cylindrical or toroidal magnetic
field generator, often small and portable, into which a treatment
recipient could place a limb to receive electromagnetic therapy.
Because of size and other limitations, the magnetic field strength
generated in this type system was usually relatively low. Also, the
magnetic field was a time varying one. Electrical current applied to
cause the magnetic field was time varying, whether in the form of
simple alternating current waveforms or a waveform composed of a series
of time-spaced pulses."
[0459] The magnetic field generator claimed in U.S.
Pat. No. 6,641,520 comprised " . . . . a magnetic field generating coil
composed of a wound wire coil generating the static magnetic field in
response to electrical power; a mounting member having the coil mounted
thereon and having an opening therethrough of a size to permit
insertion of a limb of the recipient in order to receive
electromagnetic therapy from the magnetic field coil; an electrical
power supply furnishing power to the magnetic field coil to cause the
coil to generate a static electromagnetic field within the opening of
the mounting member for application to the recipient's limb; a level
control mechanism providing a reference signal representing a specified
electromagnetic field strength set point for regulating the power
furnished to the magnetic field coil; a field strength sensor detecting
the static electromagnetic field strength generated by the magnetic
field coil and forming a field strength signal representing the
detected electromagnetic field strength in the opening in the mounting
member; a control signal generator receiving the field strength signal
from the field strength sensor and the reference signal from the level
control mechanism representing a specified electromagnetic field
strength set point; and the control signal generator forming a signal
to regulate the power flowing from the electrical power supply to the
magnetic field coil."
[0460] An implantable sensor is disclosed in U.S.
Pat. No. 6,491,639, the entire disclosure of which is hereby
incorporated by reference into this specification; this sensor also may
be used in conjunction with the anti-mitotic compound of this
invention, and/or tubulin, and/or microtubules. Claim 1 of such patent
describes: "An implantable medical device including a sensor for use in
detecting the hemodynamic status of a patient comprising:a hermetic
device housing enclosing device electronics for receiving and
processing data; and said device housing including at least one recess
and a sensor positioned in said at least one recess. "Claim 10 of such
patent describes "10. An implantable medical device including a
hemodynamic sensor for monitoring arterial pulse amplitude comprising:
a device housing; a transducer comprising a light source and a light
detector positioned exterior to said device housing responsive to
variations in arterial pulse amplitude; and wherein said light detector
receives light originating from said light source and reflected from
arterial vasculature of a patient and generates a signal which is
indicative of variations in the reflected light caused by the expansion
and contraction of said arterial vasculature. "Claim 14 of such patent
describes: "14. An implantable medical device including a hemodynamic
sensor for monitoring arterial pulse amplitude comprising: a device
housing; and an ultrasound transducer associated with said device
housing responsive to variations in arterial pulse amplitude." Claim 15
of such patent describes: "15. An implantable medical device including
a hemodynamic sensor for monitoring arterial pulse amplitude
comprising: a device housing; and a transducer associated with said
device housing responsive to variations in arterial pulse amplitude,
said device housing having at least one substantially planar face and
said transducer is positioned on said planar face." Claim 17 of such
patent describes " . . . an implantable pulse generator . . . "
[0461] U.S. Pat. No. 6,663,555, the entire
disclosure of which is incorporated by reference into this
specification, also claims a magnetic field generator; this magnetic
field generator may be used in conjunction with the anti-mitotic
compound of this invention and/or tubulin and/or microtubules. Claim 1
of this patent describes: "A magnet keeper-shield assembly for housing
a magnet, said magnet keeper-shield assembly comprising: a
keeper-shield comprising a material substantially permeable to a
magnetic flux; a cavity in the keeper-shield, said cavity comprising an
inner side wall and a base, and said cavity being adapted to accept a
magnet having a front and a bottom face; an actuator extending through
the base; a plurality of springs extending through the base, said
springs operative to exert a force in a range from about 175 pounds to
about 225 pounds on the bottom face of the magnet in a retracted
position, and wherein said magnet produces at least about 118 gauss at
a distance of about 10 cm from the front face in the extended position
and produces at most about 5 gauss at a distance less than or equal to
about 22 cm from the front face in the retracted position."
[0462] Published United States patent application
US2002/0182738 discloses an implantable flow cytometer; the entire
disclosure of this published United States patent application is hereby
incorporated by reference into this specification. Claim 1 of this
patent describes "A flow cytometer comprising means for sampling
cellular material within a body, means for marking cells within said
bodily fluid with a marker to produce marked cells, means for analyzing
said marked cells, a first means for removing said marker from said
marked cells, a second means for removing said marker from said marked
cells, means for sorting said cells within said bodily fluid to produce
sorted cells, and means for maintaining said sorted cells cells in a
viable state."
[0463] Referring again to published United States
patent application US2002/0182738, the implantable flow cytometer may
contain " . . . a first control valve operatively connected to said
first means for removing said marker from said marked cells and to said
second means for removing said marker from said marked cells . . . "
(see claim 3), a controller connected to the first control valve (claim
4), a second control valve (claim 5), a third control valve (claim 6),
a dye separator (claims 7 and 8), an analyzer for testing blood purity
(claim 9), etc.
[0464] A similar flow cytometer is disclosed in
published United States patent application US2003/0036718, the entire
disclosure of which is also hereby incorporated by reference into this
specification.
[0465] Published United States patent application
US2003/0036776, the entire disclosure of which is hereby incorporated
by reference into this specification, discloses an MRI-compatible
implantable device. Claim 1 of this patent describes "A cardiac assist
device comprising means for connecting said cardiac assist device to a
heart, means for furnishing electrical impulses from said cardiac
assist device to said heart, means for ceasing the furnishing of said
electrical impulses to said heart, means for receiving pulsed radio
frequency fields, means for transmitting and receiving optical signals,
and means for protecting said heart and said cardiac assist device from
currents induced by said pulsed radio frequency fields, wherein said
cardiac assist device contains a control circuit comprised of a
parallel resonant frequency circuit and means for activating said
parallel resonant frequency circuit." The " . . . means for activating
said parallel resonant circuit . . . . " may contain " . . . comprise
optical means (see claim 2) such as an optical switch (claim 3)
comprised of " . . . a pin type diode . . . " (claim 4) and connected
to an optical fiber (claim 5). The optical switch may be " . . .
activated by light from a light source . . . " (claim 6), and it may be
located with a biological organism (claim 7). The light source may be
located within the biological organism (claim 9), and it may provide "
. . . light with a wavelength of from about 750 to about 850 nanometers
. . . . "
Polymeric Carriers and/or Delivery Systems
[0466] The anti-mitotic compound of this invention
may be used in conjunction with prior art polymeric carriers and/or
delivery systems comprised of polymeric material.
[0467] In one embodiment, the polymeric material is
preferably comprised of one or more anti-mitotic compounds that are
adapted to be released from the polymeric material when the polymeric
material is disposed within a biological organism. The polymeric
material may be, e.g., any of the drug eluting polymers known to those
skilled in the art.
[0468] By way of illustration, and referring to
U.S. Pat. No. 3,279,996 (the entire disclosure of which is hereby
incorporated by reference into this specification), the polymeric
material may be silicone rubber. This patent claims "An implantate for
releasing a drug in the tissues of a living organism comprising a drug
enclosed in a capsule of silicone rubber, . . . said drug being soluble
in and capable of diffusing through said silicone rubber to the outer
surface of said capsule . . . . " One may use, as the anti-mitotic
compound a material that is soluble in and capable of diffusing through
the polymeric material.
[0469] At column 1 of U.S. Pat. No. 3,279,996,
other "carrier agents" which may be used as polymeric material are also
disclosed, including " . . . beeswax, peanut oil, stearates, etc." Any
of these "carrier agents" may be used as the polymeric material.
[0470] By way of further illustration, and as is
disclosed in U.S. Pat. No. 4,191,741 (the entire disclosure of which is
hereby incorporated by reference into this specification), one may use
dimethylpolsiloxane rubber as the polymeric material. This patent
claims "A solid, cylindrical, subcutaneous implant for improving the
rate of weight gain of ruminant animals which comprises (a) a
biocompatible inert core having a diameter of from about 2 to about 10
mm. and (b) a biocompatible coating having a thickness of from about
0.2 to about 1 mm., the composition of said coating comprising from
about 5 to about 40 percent by weight of estradiol and from about 95 to
about 60 percent by weight of a dimethylpolysiloxane rubber."
[0471] In column 1 of U.S. Pat. No. 4,191,741,
other materials which may be used as the polymeric material are
disclosed. Thus, it is stated in such patent that "Long et al. U.S.
Pat. No. 3,279,996 describes an implant for releasing a drug in the
tissues of a living organism comprising the drug enclosed in a capsule
formed of silicone rubber. The drug migrates through the silicone
rubber wall and is slowly released into the living tissues. A number of
biocompatible silicone rubbers are described in the Long et al. patent.
When a drug delivery system such as that described in U.S. Pat. No.
3,279,996 is used in an effort to administer estradiol to a ruminant
animal a number of problems are encountered. For example, an excess of
the drug is generally required in the hollow cavity of the implant.
Also, it is difficult to achieve a constant rate of administration of
the drug over a long time period such as from 200 to 400 days as would
be necessary for the daily administration of estradiol to a growing
beef animal. Katz et al. U.S. Pat. No. 4,096,239 describes an implant
pellet containing estradiol or estradiol benzoate which has an inert
spherical core and a uniform coating comprising a carrier and the drug.
The coating containing the drug must be both biocompatible and
biosoluble, i.e., the coating must dissolve in the body fluids which
act upon the pellet when it is implanted in the body. The rate at which
the coating dissolves determines the rate at which the drug is
released. Representative carriers for use in the coating material
include cholesterol, solid polyethylene glycols, high molecular weight
fatty acids and alcohols, biosoluble waxes, cellulose derivatives and
solid polyvinyl pyrrolidone." The polymeric material used with the
anti-mitotic compound is, in one embodiment, both biocompatible and
biosoluble.
[0472] By way of yet further illustration, and
referring to U.S. Pat. No. 4,429,080 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may be a synthetic absorbable copolymer formed by
copolymerizing glycolide with trimethylene carbonate.
[0473] By way of yet further illustration, and
referring to U.S. Pat. No. 4,581,028 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may be selected from the group consisting of
polyester (such as Dacron), polytetrafluoroethylene, polyurethane
silicone-based material, and polyamide. The polymeric material of this
patent is comprised " . . . of at least one antimicrobial agent
selected from the group consisting of the metal salts of sulfonamides."
In one embodiment, the polymeric material is comprised of an
antimicrobial agent.
[0474] By way of yet further illustration, and
referring to U.S. Pat. No. 4,481,353, (the entire disclosure of which
is hereby incorporated by reference into this specification), the
polymeric material may be the bioresorbable polyester disclosed in such
patent. U.S. Pat. No. 4,481,353 claims "A bioresorbable polyester in
which monomeric subunits are arranged randomly in the polyester
molecules, said polyester comprising the condensation reaction product
of a Krebs Cycle dicarboxylic acid or isomer or anhydride thereof,
chosen for the group consisting of succinic acid, fumaric acid,
oxaloacetic acid, L-malic acid, and D-malic acid, a diol having 2, 4,
6, or 8 carbon atoms, and an alpha-hydroxy carboxylic acid chosen from
the group consisting of glycolic acid, L-lactic acid and D-lactic
acid."
[0475] By way of yet further illustration, and
referring to U.S. Pat. No. 4,846,844 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may be a silicone polymer matrix in which an
anabolic agent (such as an anabolic steroid, or estradiol) is disposed.
This patent claims "An implant adapted for the controlled release of an
anabolic agent, said implant comprising a silicone polymer matrix, an
anabolic agent in said polymer matrix, and an antimicrobial coating,
wherein the coating comprises a first-applied non-vulcanizing silicone
fluid and a subsequently applied antimicrobial agent in contact with
said fluid."
[0476] By way of yet further illustration, and
referring to U.S. Pat. No. 4,916,193 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may be a copolymer containing carbonate repeat units
and ester repeat units (see, e.g., claim 1 of the patent). As disclosed
in column 2 of the patent, it may also be "collagen," "homopolymers and
copolymers of glycolic acid and lactic acid," "alpha-hydroxy carboxylic
acids in conjunction with Krebs cycle dicarboxylic acids and aliphatic
diols," "polycarbonate-containing polymers," and "high molecular weight
fiber-forming crystalline copolymers of lactide and glycolide." Thus,
it is disclosed in such column 2 that: "Various polymers have been
proposed for use in the fabrication of bioresorbable medical devices.
Examples of absorbable materials used in nerve repair include collagen
as disclosed by D. G. Kline and G. J. Hayes, "The Use of a Resorbable
Wrapper for Peripheral Nerve Repair, Experimental Studies in
Chimpanzees", J. Neurosurgery 21, 737 (1964). Artandi et al., U.S. Pat.
No. 3,272,204 (1966) reports the use of collagen protheses that are
reinforced with nonabsorbable fabrics. These articles are intended to
be placed permanently in a human body. However, one of the
disadvantages inherent with collagenous materials, whether utilized
alone or in conjunction with biodurable materials, is their potential
antigenicity. Other biodegradable polymers of particular interest for
medical implantation purposes are homopolymers and copolymers of
glycolic acid and lactic acid. A nerve cuff in the form of a smooth,
rigid tube has been fabricated from a copolymer of lactic and glycolic
acids [The Hand; 10 (3) 259 (1978)]. European patent application No.
118-458-A discloses biodegradable materials used in organ protheses or
artificial skin based on poly-L-lactic acid and/or poly-DL-lactic acid
and polyester or polyether urethanes. U.S. Pat. No. 4,481,353 discloses
bioresorbable polyester polymers, and composites containing these
polymers, that are also made up of alpha-hydroxy carboxylic acids, in
conjunction with Krebs cycle dicarboxylic acids and aliphatic diols.
These polyesters are useful in fabricating nerve guidance channels as
well as other surgical articles such as sutures and ligatures. U.S.
Pat. Nos. 4,243,775 and 4,429,080 disclose the use of
polycarbonate-containing polymers in certain medical applications,
especially sutures, ligatures and haemostatic devices. However, this
disclosure is clearly limited only to "AB" and "ABA" type block
copolymers where only the "B" block contains poly(trimethylene
carbonate) or a random copolymer of glycolide with trimethylene
carbonate and the "A" block is necessarily limited to glycolide. In the
copolymers of this patent, the dominant portion of the polymer is the
glycolide component. U.S. Pat. No. 4,157,437 discloses high molecular
weight, fiber-forming crystalline copolymers of lactide and glycolide
which are disclosed as useful in the preparation of absorbable surgical
sutures. The copolymers of this patent contain from about 50 to 75 wt.
% of recurring units derived from glycolide."
[0477] By way of further illustration, and
referring to U.S. Pat. No. 5,176,907 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may be the poly-phosphoester-urethane) described and
claimed in claim 1 of such patent. Furthermore, the polymeric material
may be one or more of the biodegradable polymers discussed in columns 1
and 2 of such patent. As is disclosed in such columns 1 and 2:
"Polymers have been used as carriers of therapeutic agents to effect a
localized and sustained release (Controlled Drug Delivery, Vol. I and
II, Bruck, S. D., (ed.), CRC Press, Boca Raton, Fla., 1983; Leong, et
al., Adv. Drug Delivery Review, 1:199, 1987). These anti-mitotic
compound delivery systems simulate infusion and offer the potential of
enhanced therapeutic efficacy and reduced systemic toxicity." The
polymeric material may be such a poly-phosphoester-urethane.
[0478] U.S. Pat. No. 5,176,907 also discloses "For
a non-biodegradable matrix, the steps leading to release of the
anti-mitotic compound are water diffusion into the matrix, dissolution
of the therapeutic agent, and out-diffusion of the anti-mitotic
compound through the channels of the matrix. As a consequence, the mean
residence time of the anti-mitotic compound existing in the soluble
state is longer for a non-biodegradable matrix than for a biodegradable
matrix where a long passage through the channels is no longer required.
Since many pharmaceuticals have short half-lives it is likely that the
anti-mitotic compound is decomposed or inactivated inside the
non-biodegradable matrix before it can be released. This issue is
particularly significant for many bio-macromolecules and smaller
polypeptides, since these molecules are generally unstable in buffer
and have low permeability through polymers. In fact, in a
non-biodegradable matrix, many bio-macromolecules will aggregate and
precipitate, clogging the channels necessary for diffusion out of the
carrier matrix. This problem is largely alleviated by using a
biodegradable matrix which allows controlled release of the therapeutic
agent. Biodegradable polymers differ from non-biodegradable polymers in
that they are consumed or biodegraded during therapy. This usually
involves breakdown of the polymer to its monomeric subunits, which
should be biocompatible with the surrounding tissue. The life of a
biodegradable polymer in vivo depends on its molecular weight and
degree of cross-linking; the greater the molecular weight and degree of
crosslinking, the longer the life. The most highly investigated
biodegradable polymers are polylactic acid (PLA), polyglycolic acid
(PGA), polyglycolic acid (PGA), copolymers of PLA and PGA, polyamides,
and copolymers of polyamides and polyesters. PLA, sometimes referred to
as polylactide, undergoes hydrolytic de-esterification to lactic acid,
a normal product of muscle metabolism. PGA is chemically related to PLA
and is commonly used for absorbable surgical sutures, as is the PLA/PGA
copolymer. However, the use of PGA in controlled-release implants has
been limited due to its low solubility in common solvents and
subsequent difficulty in fabrication of devices." The polymeric
material 14 may be a biodegradable polymeric material.
[0479] U.S. Pat. No. 5,176,907 also discloses "An
advantage of a biodegradable material is the elimination of the need
for surgical removal after it has fulfilled its mission. The appeal of
such a material is more than simply for convenience. From a technical
standpoint, a material which biodegrades gradually and is excreted over
time can offer many unique advantages."
[0480] U.S. Pat. No. 5,176,907 also discloses "A
biodegradable thereapeutic agent delivery system has several additional
advantages: 1) the therapeutic agent release rate is amenable to
control through variation of the matrix composition; 2) implantation
can be done at sites difficult or impossible for retrieval; 3) delivery
of unstable therapeutic agents is more practical. This last point is of
particular importance in light of the advances in molecular biology and
genetic engineering which have lead to the commercial availability of
many potent bio-macromolecules. The short in vivo half-lives and low GI
tract absorption of these polypeptides render them totally unsuitable
for conventional oral or intravenous administration. Also, because
these substances are often unstable in buffer, such polypeptides cannot
be effectively delivered by pumping devices."
[0481] U.S. Pat. No. 5,176,907 also discloses "In
its simplest form, a biodegradable therapeutic agent delivery system
consist of a dispersion of the drug solutes in a polymer matrix. The
therapeutic agent is released as the polymeric matrix decomposes, or
biodegrades into soluble products which are excreted from the body.
Several classes of synthetic polymers, including polyesters (Pitt, et
al., in Controlled Release of Bioactive Materials, R. Baker, Ed.,
Academic Press, New York, 1980); polyamides (Sidman, et al., Journal of
Membrane Science, 7:227, 1979); polyurethanes (Maser, et al., Journal
of Polymer Science, Polymer Symposium, 66:259,1979); polyorthoesters
(Heller, et al., Polymer Engineering Science, 21:727,1981); and
polyanhydrides (Leong, et al., Biomaterials, 7:364, 1986) have been
studied for this purpose." The "therapeutic agent" used in this (and
other) patents may be the anti-mitotic compound of this invention.
[0482] By way of yet further illustration, and
referring to U.S. Pat. No. 5,194,581 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may the poly (phosphoester) compositions described
in such patent.
[0483] The polymeric material may be in the form of
microcapsules within which the anti-mitotic compound of this invention
is disposed. Thus, one may use microcapusels such as, e.g., the
microcapsule described in U.S. Pat. No. 6,117,455, the entire
disclosure of which is hereby incorporated by reference into this
specification. As is disclosed in the abstract of this patent, there is
provided "A sustained-release microcapsule contains an amorphous
water-soluble pharmaceutical agent having a particle size of from 1
nm-10 .mu.m and a polymer. The microcapsule is produced by dispersing,
in an aqueous phase, a dispersion of from 0.001-90% (w/w) of an
amorphous water-soluble pharmaceutical agent in a solution of a polymer
having a wt. avg. molecular weight of 2,000-800,000 in an organic
solvent to prepare an s/o/w emulsion and subjecting the emulsion to
in-water drying."
[0484] In one embodiment, disclosed in U.S. Pat.
No. 5,484,584 (the entire disclosure of which is hereby incorporated by
reference into this specification), a poly (benzyl-L-glutamate)
microsphere is disclosed (see, e.g., claim 10); the anti-mitotic
compound of this invention may be disposed within and/or on the surface
of such microsphere. As is disclosed in the abstract of this patent,
"The present invention relates to a highly efficient method of
preparing modified microcapsules exhibiting selective targeting. These
microcapsules are suitable for encapsulation surface attachment of
therapeutic and diagnostic agents. In one aspect of the invention,
surface charge of the polymeric material is altered by conjugation of
an amino acid ester to the providing improved targeting of encapsulated
agents to specific tissue cells. Examples include encapsulation of
radiodiagnostic agents in 1 .mu.m capsules to provide improved
opacification and encapsulation of cytotoxic agents in 100 .mu.m
capsules for chemoembolization procedures. The microcapsules are
suitable for attachment of a wide range of targeting agents, including
antibodies, steroids and drugs, which may be attached to the
microcapsule polymer before or after formation of suitably sized
microcapsules. The invention also includes microcapsules surface
modified with hydroxyl groups. Various agents such as estrone may be
attached to the microcapsules and effectively targeted to selected
organs."
[0485] The release rate of the anti-mitotic
compound from the polymeric material may be varied in, e.g., the manner
suggested in column 6 of U.S. Pat. No. 5,194,581, the entire disclosure
of which is hereby incorporated by reference into this specification.
As is disclosed in such column 6, "A wide range of degradation rates
can be obtained by adjusting the hydrophobicities of the backbones of
the polymers and yet the biodegradability is assured. This can be
achieved by varying the functional groups R or R'. The combination of a
hydrophobic backbone and a hydrophilic linkage also leads to
heterogeneous degradation as cleavage is encouraged, but water
penetration is resisted." As is disclosed at column 9 of such patent,
"The rate of biodegradation of the poly(phosphoester) compositions of
the invention may also be controlled by varying the hydrophobicity of
the polymer. The mechanism of predictable degradation preferably relies
on either group R' in the poly(phosphoester) backbone being hydrophobic
for example, an aromatic structure, or, alternatively, if the group R'
is not hydrophobic, for example an aliphatic group, then the group R is
preferably aromatic. The rates of degradation for each
poly(phosphoester) composition are generally predictable and constant
at a single pH. This permits the compositions to be introduced into the
individual at a variety of tissue sites. This is especially valuable in
that a wide variety of compositions and devices to meet different, but
specific, applications may be composed and configured to meet specific
demands, dimensions, and shapes--each of which offers individual, but
different, predictable periods for degradation. When the composition of
the invention is used for long term delivery of an anti-mitotic
compound a relatively hydrophobic backbone matrix, for example,
containing bisphenol A, is preferred. It is possible to enhance the
degradation rate of the poly(phosphoester) or shorten the functional
life of the device, by introducing hydrophilic or polar groups, into
the backbone matrix. Further, the introduction of methylene groups into
the backbone matrix will usually increase the flexibility of the
backbone and decrease the crystallinity of the polymer. Conversely, to
obtain a more rigid backbone matrix, for example, when used
orthopedically, an aromatic structure, such as a diphenyl group, can be
incorporated into the matrix. Also, the poly(phosphoester) can be
crosslinked, for example, using 1,3,5-trihydroxybenzene or (CH2 OH)4 C,
to enhance the modulus of the polymer. Similar considerations hold for
the structure of the side chain (R)."
[0486] By way of yet further illustration, and
referring to U.S. Pat. No. 5,252,713 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may be a polypeptide comprising at least one
drug-binding domain that non-covalently binds a drug. The means of
identifying and isolating such a polypeptide is described at columns
5-7 of the patent, wherein it is disclosed that: "The process of
isolating a polymeric carrier from a drug-binding, large molecular
weight protein begins with the identification of a large protein that
can non-covalently bind the drug of interest. Examples of such
protein/drug pairs are shown in Table I. The drugs in the Table (other
than the steroids) are anti-cancer drugs . . . "
[0487] As is also disclosed in U.S. Pat. No.
5,252,713, "Other drug-binding proteins may be identified by
appropriate analytical procedures, including Western blotting of large
proteins or protein fragments and subsequent incubation with a
detectable form of drug. Alternative procedures include combining a
drug and a protein in a solution, followed by size exclusion HPLC gel
filtration, thin-layer chromatography (TLC), or other analytical
procedures that can discriminate between free and protein-bound drug.
Detection of drug binding can be accomplished by using radiolabeled,
fluorescent, or colored drugs and appropriate detection methods.
Equilibrium dialysis with labeled drug may be used. Alternative methods
include monitoring the fluorescence change that occurs upon binding of
certain drugs (e.g., anthracyclines or analogs thereof, which should be
fluorescent) . . . . "In one detection method, drug and protein are
mixed, and an aliquot of this solution (not exceeding 5% of the column
volume of an HPLC column, such as a Bio-sil TSK-250 7.5.times.30 cm
column) is loaded onto the HPLC column. The flow rate is 1 ml/min. The
drug bound to protein will elute first, in a separate peak, followed by
free drug, eluting at a position characteristic of its molecular
weight. If the drug is doxorubicin, both a 280-nm as well as a 495-nm
adsorptive peak will correspond to the elution position of the protein
if interaction occurs. The elution peaks for other drugs will indicate
whether drug binding occurs . . . . "
[0488] As is also disclosed in U.S. Pat. No.
5,252,713, "Knowledge of the chemical structure of a particular drug
(i.e., whether chemically reactive functional groups are present)
allows one to predict whether covalent binding of the drug to a given
protein can occur. Additional methods for determining whether drug
binding is covalent or non-covalent include incubating the drug with
the protein, followed by dialysis or subjecting the protein to
denaturing conditions. Release of the drug from the drug-binding
protein during these procedures indicates that the drug was
non-covalently bound. Usually, a dissociation constant of about 10-15 M
or less indicates covalent or extremely tight non-covalent binding . .
. . "
[0489] As is also disclosed in U.S. Pat. No.
5,252,713, "During dialysis, non-covalently bound drug molecules are
released over time from the protein and pass through a dialysis
membrane, whereas covalently bound drug molecules are retained on the
protein. An equilibrium constant of about 10-5 M indicates non-covalent
binding. Alternatively, the protein may be subjected to denaturing
conditions; e.g., by gel electrophoresis on a denaturing (SDS) gel or
on a gel filtration column in the presence of a strong denaturant such
as 6M guanidine. Covalently bound drug molecules remain bound to the
denatured protein, whereas non-covalently bound drug molecules are
released and migrate separately from the protein on the gel and are not
retained with the protein on the column."
[0490] As is also disclosed in U.S. Pat. No.
5,252,713, "Once a protein that can non-covalently bind a particular
drug of interest is identified, the drug-binding domain is identified
and isolated from the protein by any suitable means. Protein domains
are portions of proteins having a particular function or activity (in
this case, non-covalent binding of drug molecules). The present
invention provides a process for producing a polymeric carrier,
comprising the steps of generating peptide fragments of a protein that
is capable of non-covalently binding a drug and identifying a
drug-binding peptide fragment, which is a peptide fragment containing a
drug-binding domain capable of non-covalently binding the drug, for use
as the polymeric carrier."
[0491] As is also disclosed in U.S. Pat. No.
5,252,713, "One method for identifying the drug-binding domain begins
with digesting or partially digesting the protein with a proteolytic
enzyme or specific chemicals to produce peptide fragments. Examples of
useful proteolytic enzymes include lys-C-endoprotease,
arg-C-endoprotease, V8 protease, endoprolidase, trypsin, and
chymotrypsin. Examples of chemicals used for protein digestion include
cyanogen bromide (cleaves at methionine residues), hydroxylamine
(cleaves the Asn-Gly bond), dilute acetic acid (cleaves the Asp-Pro
bond), and iodosobenzoic acid (cleaves at the tryptophane residue). In
some cases, better results may be achieved by denaturing the protein
(to unfold it), either before or after fragmentation."
[0492] As is also disclosed in U.S. Pat. No.
5,252,713, "The fragments may be separated by such procedures as high
pressure liquid chromatography (HPLC) or gel electrophoresis. The
smallest peptide fragment capable of drug binding is identified using a
suitable drug-binding analysis procedure, such as one of those
described above. One such procedure involves SDS-PAGE gel
electrophoresis to separate protein fragments, followed by Western
blotting on nitrocellulose, and incubation with a colored drug like
adriamycin. The fragments that have bound the drug will appear red.
Scans at 495 nm with a laser densitometer may then be used to analyze
(quantify) the level of drug binding."
[0493] As is also disclosed in U.S. Pat. No.
5,252,713, "Preferably, the smallest peptide fragment capable of
non-covalent drug binding is used. It may occasionally be advisable,
however, to use a larger fragment, such as when the smallest fragment
has only a low-affinity drug-binding domain."
[0494] As is also disclosed in U.S. Pat. No.
5,252,713, "The amino acid sequence of the peptide fragment containing
the drug-binding domain is elucidated. The purified fragment containing
the drug-binding region is denatured in 6M guanidine hydrochloride,
reduced and carboxymethylated by the method of Crestfield et al., J.
Biol. Chem. 238:622,1963. As little as 20 to 50 picomoles of each
peptide fragment can be analyzed by automated Edman degradation using a
gas-phase or liquid pulsed protein sequencer (commercially available
from Applied Biosystems, Inc.). If the peptide fragment is longer than
30 amino acids, it will most likely have to be fragmented as above and
the amino acid sequence patched together from sequences of overlapping
fragments."
[0495] As is also disclosed in U.S. Pat. No.
5,252,713, "Once the amino acid sequence of the desired peptide
fragment has been determined, the polymeric carriers can be made by
either one of two types of synthesis. The first type of synthesis
comprises the preparation of each peptide chain with a peptide
synthesizer (e.g., commercially available from Applied Biosystems). The
second method utilizes recombinant DNA procedures." The polymeric
material 14 may comprise one or more of the polymeric carriers
described in U.S. Pat. No. 5,252,713.
[0496] As is also disclosed in U.S. Pat. No.
5,252,713, "Peptide amides can be made using
4-methylbenzhydrylamine-derivatized, cross-linked polystyrene-1%
divinylbenzene resin and peptide acids made using PAM
(phenylacetamidomethyl) resin (Stewart et al., "Solid Phase Peptide
Synthesis," Pierce Chemical Company, Rockford, Ill., 1984). The
synthesis can be accomplished either using a commercially available
synthesizer, such as the Applied Biosystems 430A, or manually using the
procedure of Merrifield et al., Biochemistry 21:5020-31,1982; or
Houghten, PNAS 82:5131-35,1985. The side chain protecting groups are
removed using the Tam-Merrifield low-high HF procedure (Tam et al., J.
Am. Chem. Soc. 105:6442-55, 1983). The peptide can be extracted with
20% acetic acid, lyophilized, and purified by reversed-phase HPLC on a
Vydac C-4 Analytical Column using a linear gradient of 100% waterto
100% acetonitrile-0.1% trifluoroacetic acid in 50 minutes. The peptide
is analyzed using PTC-amino acid analysis (Heinrikson et al., Anal.
Biochem. 136:65-74, 1984). After gas-phase hydrolysis (Meltzer et al.,
Anal. Biochem. 160: 356-61, 1987), sequences are confirmed using the
Edman degradation or fast atom bombardment mass spectroscopy. After
synthesis, the polymeric carriers can be tested for drug binding using
size-exclusion HPLC, as described above, or any of the other analytical
methods listed above."
[0497] The polymeric carriers of U.S. Pat. No.
5,252,713 may be used with the anti-mitotic compounds of this
invention. As is also disclosed in U.S. Pat. No. 5,252,713, "The
polymeric carriers of the present invention preferably comprise more
than one drug-binding domain. A polypeptide comprising several
drug-binding domains may be synthesized. Alternatively, several of the
synthesized drug-binding peptides may be joined together using
bifunctional cross-linkers, as described below." The polymeric material
in one embodiment, comprises more than one drug-binding domain.
[0498] By way of yet further illustration, and
referring to U.S. Pat. No. 5,420,105 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may form a conjugate with a ligand. Thus, and
referring to claim 1 of such patent, such conjugate may be "A ligand or
an anti-ligand/polymeric carrier/drug conjugate comprising a ligand
consisting of biotin or an anti-ligand selected from the group
consisting of avidin and streptavidin, which ligand or anti-ligand is
covalently bound to a polymeric carrier that comprises at least one
drug-binding domain derived from a drug-binding protein, and at least
one drug non-covalently bound to the polymeric carrier, wherein the
polymeric carrier does not comprise an entire drug-binding protein, but
is derived from a drug-binding domain of said drug-binding protein
which derivative non-covalently binds a drug which is non-covalently
bound by an entire naturally occurring drug-binding protein, and
wherein the molecular weight of the polymeric carrier is less than
about 60,000 daltons, and wherein said drug is selected from the group
consisting of an anti-cancer anthracycline antibiotic, cis-platinum,
methotrexate, vinblastine, mitoxanthrone ARA-C, 6-mercaptopurine,
6-mercaptoguanosine, mytomycin C and a steroid."
[0499] The polymeric material form comprise a
reservoir (see U.S. Pat. No. 5,447,724) for the anti-mitotic
compound(s). Such a reservoir may be constructed in accordance with the
procedure described in U.S. Pat. No. 5,447,724, which claims "A medical
device at least a portion of which comprises: a body insertable into a
patient, said body having an exposed surface which is adapted for
exposure to tissue of a patient and constructed to release, at a
predetermined rate, therapeutic agent to inhibit adverse physiological
reaction of said tissue to the presence of the body of said medical
device, said therapeutic agent selected from the group consisting of
antithrombogenic agents, antiplatelet agents, prostaglandins,
thrombolytic drugs, antiproliferative drugs, antirejection drugs,
antimicrobial drugs, growth factors, and anticalcifying agents, at said
exposed surface, said body including: an outer polymer metering layer,
and an internal polymer layer underlying and supporting said outer
polymer metering layer and in intimate contact therewith, said internal
polymer layer defining a reservoir for said therapeutic agent, said
reservoir formed by a polymer selected from the group consisting of
polyurethanes and its copolymers, silicone and its copolymers, ethylene
vinylacetate, thermoplastic elastomers, polyvinylchloride, polyolefins,
cellulosics, polyamides, polytetrafluoroethylenes, polyesters,
polycarbonates, polysulfones, acrylics, and acrylonitrile butadiene
styrene copolymers, said outer polymer metering layer having a stable,
substantially uniform, predetermined thickness covering the underlying
reservoir so that no portion of the reservoir is directly exposed to
body fluids and incorporating a distribution of an elutable component
which, upon exposure to body fluid, elutes from said outer polymer
metering layer to form a predetermined porous network capable of
exposing said anti-mitotic compound in said reservoir in said internal
polymer layer to said body fluid, said elutable component is selected
from the group consisting of polyethylene oxide, polyethylene glycol,
polyethylene oxide/polypropylene oxide copolymers,
polyhydroxyethylmethacrylate, polyvinylpyrollidone, polyacrylamide and
its copolymers, liposomes, albumin, dextran, proteins, peptides,
polysaccharides, polylactides, polygalactides, polyanhydrides,
polyorthoesters and their copolymers, and soluble cellulosics, said
reservoir defined by said internal polymer layer incorporating said
therapeutic agent in a manner that permits substantially free outward
release of said therapeutic agent from said reservoir into said porous
network of said outer polymer metering layer as said elutable component
elutes from said polymer metering layer, said predetermined thickness
and the concentration and particle size of said elutable component
being selected to enable said outer polymer metering layer to meter the
rate of outward migration of the thereapuetic agent from said internal
reservoir layer through said outer polymer metering layer, said outer
polymer metering layer and said internal polymer layer, in combination,
enabling prolonged controlled release, at said predetermined rate, of
said therapeutic agent at an effective dosage level from said exposed
surface of said body of said medical device to the tissue of said
patient to inhibit adverse reaction of the patient to the prolonged
presence of said body of said medical device in said patient."
[0500] U.S. Pat. No. 5,447,724 also discloses the
preparation of the "reservoir" in e.g., in columns 8 and 9 of the
patent, wherein it is disclosed that: "A particular advantage of the
time-release polymers of the invention is the manufacture of coated
articles, i.e., medical instruments. Referring now to FIG. 3, the
article to be coated such as a catheter 50 may be mounted on a mandrel
or wire 60 and aligned with the preformed apertures 62 (slightly larger
than the catheter diameter) in the teflon bottom piece 63 of a boat 64
that includes a mixture 66 of polymer at ambient temperature, e.g.,
25.degree. C. To form the reservoir portion, the mixture may include,
for example, nine parts solvent, e.g. tetrahydrofuran (THF), and one
part Pellthane.RTM. polyurethane polymer which includes the desired
proportion of ground sodium heparin particles. The boat may be moved in
a downward fashion as indicated by arrow 67 to produce a coating 68 on
the exterior of catheter 50. After a short (e.g., 15 minutes) drying
period, additional coats may be added as desired. After coating, the
catheter 50 is allowed to air dry at ambient temperature for about two
hours to allow complete solvent evaporation and/or polymerization to
form the reservoir portion. For formation of the surface-layer the boat
64 is cleaned of the reservoir portion mixture and filled with a
mixture including a solvent, e.g. THF (9 parts) and Pellthane.RTM. (1
part) having the desired amount of elutable component. The boat is
moved over the catheter and dried, as discussed above to form the
surface-layer. Subsequent coats may also be formed. An advantage of the
dipping method and apparatus described with regard to FIG. 3 is that
highly uniform coating thickness may be achieved since each portion of
the substrate is successively in contact with the mixture for the same
period of time and further, no deformation of the substrate occurs.
Generally, for faster rates of movement of the boat 64, thicker layers
are formed since the polymer gels along the catheter surfaces upon
evaporation of the solvent, rather than collects in the boat as happens
with slower boat motion. For thin layers, e.g., on the order of a few
mils, using a fairly volatile solvent such as THF, the dipping speed is
generally between 26 to 28 cm/min for the reservoir portion and around
21 cm/min for the outer layer for catheters in the range of 7 to 10 F.
The thickness of the coatings may be calculated by subtracting the
weight of the coated catheter from the weight of the uncoated catheter,
dividing by the calculated surface area of the uncoated substrate and
dividing by the known density of the coating. The solvent may be any
solvent that solubilizes the polymer and preferably is a more volatile
solvent that evaporates rapidly at ambient temperature or with mild
heating. The solvent evaporation rate and boat speed are selected to
avoid substantial solubilizing of the catheter substrate or degradation
of a prior applied coating so that boundaries between layers are
formed."
[0501] By way of yet further illustration, and
referring to U.S. Pat. No. 5,464,650 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may be one or ore of the polymeric materials
discussed at columns 4 and 5 of such patent. Referring to such columns
4 and 5, it is disclosed that: "The polymer chosen must be a polymer
that is biocompatible and minimizes irritation to the vessel wall when
the stent is implanted. The polymer may be either a biostable or a
bioabsorbable polymer depending on the desired rate of release or the
desired degree of polymer stability, but a bioabsorbable polymer is
probably more desirable since, unlike a biostable polymer, it will not
be present long after implantation to cause any adverse, chronic local
response. Bioabsorbable polymers that could be used include
poly(L-lactic acid), polycaprolactone, poly(lactide-co-glycolide),
poly(hydroxybutyrate), poly(hydroxybutyrate-co-valerate),
polydioxanone, polyorthoester, polyanhydride, poly(glycolic acid),
poly(D,L-lactic acid), poly(glycolic acid-co-trimethylene carbonate),
polyphosphoester, polyphosphoester urethane, poly(amino acids),
cyanoacrylates, poly(trimethylene carbonate), poly(iminocarbonate),
copoly(ether-esters) (e.g. PEO/PLA), polyalkylene oxalates,
polyphosphazenes and biomolecules such as fibrin, fibrinogen,
cellulose, starch, collagen and hyaluronic acid. Also, biostable
polymers with a relatively low chronic tissue response such as
polyurethanes, silicones, and polyesters could be used and other
polymers could also be used if they can be dissolved and cured or
polymerized on the stent such as polyolefins, polyisobutylene and
ethylene-alphaolefin copolymers; acrylic polymers and copolymers, vinyl
halide polymers and copolymers, such as polyvinyl chloride; polyvinyl
ethers, such as polyvinyl methyl ether; polyvinylidene halides, such as
polyvinylidene fluoride and polyvinylidene chloride; polyacrylonitrile,
polyvinyl ketones; polyvinyl aromatics, such as polystyrene, polyvinyl
esters, such as polyvinyl acetate; copolymers of vinyl monomers with
each other and olefins, such as ethylene-methyl methacrylate
copolymers, acrylonitrile-styrene copolymers, ABS resins, and
ethylene-vinyl acetate copolymers; polyamides, such as Nylon 66 and
polycaprolactam; alkyd resins; polycarbonates; polyoxymethylenes;
polyimides; polyethers; epoxy resins, polyurethanes; rayon;
rayon-triacetate; cellulose, cellulose acetate, cellulose butyrate;
cellulose acetate butyrate; cellophane; cellulose nitrate; cellulose
propionate; cellulose ethers; and carboxymethyl cellulose. The ratio of
therapeutic substance to polymer in the solution will depend on the
efficacy of the polymer in securing the therapeutic substance onto the
stent and the rate at which the coating is to release the therapeutic
substance to the tissue of the blood vessel. More polymer may be needed
if it has relatively poor efficacy in retaining the therapeutic
substance on the stent and more polymer may be needed in order to
provide an elution matrix that limits the elution of a very soluble
therapeutic substance. A wide ratio of therapeutic substance to polymer
could therefore be appropriate and could range from about 10:1 to about
1:100."
[0502] By way of yet further illustration, and
referring to U.S. Pat. No. 5,470,307 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material may a synthetic or natural polymer, such as
polyamide, polyester, polyolefin (polypropylene or polyethylene),
polyurethane, latex, acrylamide, methacrylate, polyvinylchloride,
polysuflone, and the like; see, e.g., column 11 of the patent.
[0503] In one embodiment, the polymeric material is
bound to the anti-mitotic compound by one or more photosensitive
linkers. The process of preparing and binding these photosensitive
linkers is described in columns 8-9 of U.S. Pat. No. 5,470,307, wherein
it is disclosed that: "The process of fabricating a catheter 10 having
a desired therapeutic agent 20 connected thereto and then controllably
and selectively releasing that therapeutic agent 20 at a remote site
within a patient may be summarized in five steps. 1. Formation of
Substrate. The substrate layer 16 is formed on or applied to the
surface 14 of the catheter body 12, and subsequently or simultaneously
prepared for coupling to the linker layer 18. This is accomplished by
modifying the substrate layer 16 to expose or add groups such as
carboxyls, amines, hydroxyls, or sulfhydryls. In some cases, this may
be followed by customizing the substrate layer 16 with an extender 22
that will change the functionality, for example by adding a maleimide
group that will accept a Michael's addition of a sulfhydryl at one end
of a bifunctional photolytic linker 18. The extent of this
derivitization is measured by adding group-specific probes (such as 1
pyrenyl diazomethane for carboxyls, 1 pyrene butyl hydrazine for
amines, or Edman's reagent for sulfhydryls Molecular Probes, Inc. of
Eugene, Oreg. or Pierce Chemical of Rockford, Ill.) or other
fluorescent dyes that may be measured optically or by flow cytometry.
The substrate layer 16 can be built up to increase its capacity by
several methods, examples of which are discussed below."
[0504] As is also dislosed in U.S. Pat. No.
5,470,307, "2. Selection of Photolytic Release Mechanism. A
heterobifunctional photolytic linker 18 suitable for the selected
therapeutic agent d20 and designed to couple readily to the
functionality of the substrate layer 16 is prepared, and may be
connected to the substrate layer 16. Alternately, the photolinker 18
may first be bonded to the therapeutic agent 20, with the combined
complex of the therapeutic agent 20 and photolytic linker 18 together
being connected to the substrate layer 16. 3. Selection of the
Therapeutic Agent. Selection of the appropriate therapeutic agent 20
for a particular clinical application will depend upon the prevailing
medical practice. One representative example described below for
current use in PTCA and PTA procedures involves the amine terminal end
of a twelve amino acid peptide analogue of hirudin being coupled to a
chloro carbonyl group on the photolytic linker 18. Another
representative example is provided below where the therapeutic agent 20
is a nucleotide such as an antisense oligodeoxynucleotide where a
terminal phosphate is bonded by means of a diazoethane located on the
photolytic linker 18. A third representative example involves the
platelet inhibitor dipyridamole (persantin) that is attached through an
alkyl hydroxyl by means of a diazo ethane on the photolytic linker 18.
4. Fabrication of the Linker-Agent Complex and Attachment to the
Substrate. The photolytic linker 18 or the photolytic linker 18 with
the therapeutic agent 20 attached are connected to the substrate layer
16 to complete the catheter 10. A representative example is a
photolytic linker 18 having a sulfhydryl disposed on the non-photolytic
end for attachment to the substrate layer 16, in which case the
coupling will occur readily in a neutral buffer solution to a
maleimide-modified substrate layer 16 on the catheter 10. Once the
therapeutic agent 20 has been attached to the catheter 10, it is
necessary that the catheter 10 be handled in a manner that prevents
damage to the substrate layer 16, photolytic linker layer 18, and
therapeutic agent 20, which may include subsequent sterilization,
protection from ambient light, heat, moisture, and other environmental
conditions that would adversely affect the operation or integrity of
the drug-delivery catheter system 10 when used to accomplish a specific
medical procedure on a patient."
[0505] In the process of U.S. Pat. No. 5,470,307,
the linker is preferably bound to the polymeric material through a
modified functional group. The preparation of such modified functional
groups is discussed at columns 10-13 of such patent, wherein it is
disclosed that: "Most polymers including those discussed herein can be
made of materials which have modifiable functional groups or can be
treated to expose such groups. Polyamide (nylon) can be modified by
acid treatment to produce exposed amines and carboxyls. Polyethylene
terephthalate (PET, Dacron.RTM.)) is a polyester and can be chemically
treated to expose hydroxyls and carboxyls. Polystyrene has an exposed
phenyl group that can be derivitized. Polyethylene and polypropylene
(collectively referred to as polyolefins) have simple carbon backbones
which can be derivitized by treatment with chromic and nitric acids to
produce carboxyl functionality, photocoupling with suitably modified
benzophenones, or by plasma grafting of selected monomers to produce
the desired chemical functionality. For example, grafting of acrylic
acid will produce a surface with a high concentration of carboxyl
groups, whereas thiophene or 1,6 diaminocyclohexane will produce a
surface containing sulfhydryls or amines, respectively. The surface
functionality can be modified after grafting of a monomer by addition
of other functional groups. For example, a carboxyl surface can be
changed to an amine by coupling 1,6 diamino hexane, or to a sulfhydryl
surface by coupling mercapto ethyl amine."
[0506] As is also disclosed in U.S. Pat. No.
5,470,307, "Acrylic acid can be polymerized onto latex, polypropylene,
polysulfone, and polyethylene terephthalate (PET) surfaces by plasma
treatment. When measured by toluidine blue dye binding, these surfaces
show intense modification. On polypropylene microporous surfaces
modified by acrylic acid, as much as 50 nanomoles of dye binding per
cm2 of external surface area can be found to represent carboxylated
surface area. Protein can be linked to such surfaces using carbonyl
diimidazole (CDI) in tetrahydrofuran as a coupling system, with a
resultant concentration of one nanomole or more per cm2 of external
surface. For a 50,000 Dalton protein, this corresponds to 50 pg per
cm2, which is far above the concentration expected with simple plating
on the surface. Such concentrations of an anti-mitotic compound2o on
the angioplasty (PTCA) balloon of a catheter 10, when released, would
produce a high concentration of that therapeutic agent 20 at the site
of an expanded coronary artery. However, plasma-modified surfaces are
difficult to control and leave other oxygenated carbons that may cause
undesired secondary reactions"
[0507] As is also disclosed in U.S. Pat. No.
5,470,307, "In the case of balloon dilation catheters 10, creating a
catheter body 12 capable of supporting a substrate layer 16 with
enhanced surface area can be done by several means known to the art
including altering conditions during balloon spinning, doping with
appropriate monomers, applying secondary coatings such as polyethylene
oxide hydrogel, branched polylysines, or one of the various
Starburst..TM. dendrimers offered by the Aldrich Chemical Company of
Milwaukee, Wis."
[0508] As is also disclosed in U.S. Pat. No.
5,470,307, "The most likely materials for the substrate layer 16 in the
case of a dilation balloon catheter 10 or similar apparatus are shown
in FIGS. 1a-1g, including synthetic or natural polymers such as
polyamide, polyester, polyolefin (polypropylene or polyethylene),
polyurethane, and latex. For solid support catheter bodies 12, usable
plastics might include acrylamides, methacrylates, urethanes,
polyvinylchloride, polysulfone, or other materials such as glass or
quartz, which are all for the most part derivitizable."In one
embodiment, depicted in FIG. 1A, the photosensitive linker is bonded to
a plastic container 12.
[0509] As is also disclosed in U.S. Pat. No.
5,470,307, "Referring to the polymers shown in FIGS. 1a-1g, polyamide
(nylon) is treated with 3-5M hydrochloric acid to expose amines and
carboxyl groups using conventional procedures developed for enzyme
coupling to nylon tubing. A further description of this process may be
obtained from Inman, D. J. and Hornby, W. E., The Iramobilization of
Enzymes on Nylon Structures and their Use in Automated Analysis,
Biochem. J. 129:255-262 (1972) and Daka, N. J. and Laidler, Flow
kinetics of lactate dehydrogenase chemically attached to nylon tubing,
K. J., Can. J. Biochem. 56:774-779 (1978). This process will release
primary amines and carboxyls. The primary amine group can be used
directly, or succinimidyl 4 (p-maleimidophenyl) butyrate (SMBP) can be
coupled to the amine function leaving free the maleimide to couple with
a sulfhydryl on several of the photolytic linkers 18 described below
and acting as an extender 22. If needed, the carboxyl released can also
be converted to an amine by first protecting the amines with BOC groups
and then coupling a diamine to the carboxyl by means of carbonyl
diimidazole (CDI)." The polymeric material 14, and/or the container 12,
may comprise or consist essentially of nylon.
[0510] As is also disclosed in U.S. Pat. No.
5,470,307, "Polyester (Dacron.RTM.) can be functionalized using 0.01N
NaOH in 10% ethanol to release hydroxyl and carboxyl groups in the
manner described by Blassberger, D. et al, Chemically Modified
Polyesters as Supports for Enzyme Iramobilization: Isocyanide,
Acylhydrazine, and Aminoaryl derivatives of Poly(ethylene
Terephthalate), Biotechnol. and Bioeng. 20:309-315 (1978). A diamine is
added directly to the etched surface using CDI and then reacted with
SMBP to yield the same maleimide reacting group to accept the
photolytic linker 18." The polymeric material 14, and/or the container
12, may comprise or consist essentially of polyester."
[0511] As is also disclosed in U.S. Pat. No.
5,470,307, "Polystyrene can be modified many ways, however perhaps the
most useful process is chloromethylation, as originally described by
Merrifield, R. B., Solid Phase Synthesis. I. The Synthesis of a
Tetrapeptide, J. Am. Chem Soc. 85:2149-2154 (1963), and later discussed
by Atherton, E. and Sheppard, R. C., Solid Phase Peptide Synthesis: A
Practical Approach, pp. 13-23, (IRL Press 1989). The chlorine can be
modified to an amine by reaction with anhydrous ammonia." The polymeric
material may be comprised of or consist essentially of polystyrene.
[0512] As is also disclosed in U.S. Pat. No.
5,470,307, "Polyolefins (polypropylene or polyethylene) require
different approaches because they contain primarily a carbon backbone
offering no native functional groups. One suitable approach is to add
carboxyls to the surface by oxidizing with chromic acid followed by
nitric acid as described by Ngo, T. T. et al., Kinetics of
acetylcholinesterase immobilized on polyethylene tubing, Can. J.
Biochem. 57:1200-1203 (1979). These carboxyls are then converted to
amines by reacting successively with thionyl chloride and ethylene
diamine. The surface is then reacted with SMBP to produce a maleimide
that will react with the sulfhydryl on the photolytic linker 18." The
polymeric material may be comprised of or consist essentially of
polyolefin material.
[0513] As is also disclosed in U.S. Pat. No.
5,470,307, "A more direct method is to react the polyolefin surfaces
with benzophenone 4-maleimide as described by Odom, O. W. et al,
Relaxation Time, Interthiol Distance, and Mechanism of Action of
Ribosomal Protein S1, Arch. Biochem Biophys. 230:178-193 (1984), to
produce the required group for the sulfhydryl addition to the
photolytic linker 18. The benzophenone then links to the polyolefin
through exposure to ultraviolet (uv) light. Other methods to derivitize
the polyolefin surface include the use of radio frequency glow
discharge (RFGD)--also known as plasma discharge--in several different
manners to produce an in-depth coating to provide functional groups as
well as increasing the effective surface area. Polyethylene oxide (PEO)
can be crosslinked to the surface, or polyethylene glycol (PEG) can
also be used and the mesh varied by the size of the PEO or PEG. This is
discussed more fully by Sheu, M. S., et al., A glow discharge treatment
to immobilize poly(ethylene oxide)/poly(propylene oxide) surfactants
for wettable and non-fouling biomaterials, J. Adhes. Sci. Tech.,
6:995-1009 (1992) and Yasuda, H., Plasma Polymerization, (Academic
Press, Inc. 1985). Exposed hydroxyls can be activated by tresylation,
also known as trifluoroethyl sulfonyl chloride activation, in the
manner described by Nielson, K. and Mosbach, K., Tresyl
Chloride-Activated Supports for Enzyme Immobilization (and related
articles), Meth. Enzym., 135:65-170 (1987). The function can be
converted to amines by addition of ethylene diamine or other aliphatic
diamines, and then the usual addition of SMBP will give the required
maleimide. Another suitable method is to use RFGD to polymerize acrylic
acid or other monomers on the surface of the polyolefin. This surface
consisting of carboxyls and other carbonyls is derivitizable with CDI
and a diamine to give an amine surface which then can react with SMBP."
[0514] Referring again to the process described in
U.S. Pat. No. 5,470,307, photolytic linkers can be conjugated to the
functional groups on substrate layers to form linker-agent complexes.
As is disclosed in columns 13-14 of such patent, "Once a particular
functionality for the substrate layer 16 has been determined, the
appropriate strategy for coupling the photolytic linker 18 can be
selected and employed. Several such strategies are set out in the
examples which follow. As with selecting a method to expose a
functional group on the surface 14 of the substrate layer 16, it is
understood that selection of the appropriate strategy for coupling the
photolytic linker 18 will depend upon various considerations including
the chemical functionality of the substrate layer 16, the particular
therapeutic agent 20 to be used, the chemical and physical factors
affecting the rate and equilibrium of the particular photolytic release
mechanism, the need to minimize any deleterious side-effects that might
result (such as the production of antagonistic or harmful chemical
biproducts, secondary chemical reactions with adjunct medical
instruments including other portions of the catheter 10, unclean
leaving groups or other impurities), and the solubility of the material
used to fabricate the catheter body 12 or substrate layer 16 in various
solvents. More limited strategies are available for the coupling of a
2-nitrophenyl photolytic linker 18. If the active site is 1-ethyl
hydrazine used in most caging applications, then the complementary
functionality on the therapeutic agent 20 will be a carboxyl, hydroxyl,
or phosphate available on many pharmaceutical drugs. If a bromomethyl
group is built into the photolytic linker 18, it can accept either a
carboxyl or one of many other functional groups, or be converted to an
amine which can then be further derivitized. In such a case, the
leaving group might not be clean and care must be taken when adopting
this strategy for a particular anti-mitotic compound 20. Other
strategies include building in an oxycarbonyl in the 1-ethyl position,
which can form an urethane with an amine in the anti-mitotic
compound2o. In this case, the photolytic process evolves CO2."
[0515] Referring again to U.S. Pat. No. 5,470,307,
after the photolytic linker construct has been prepared, it may be
contacted with a coherent laser light source to release the therapeutic
agent. Thus, as is disclosed in column 9 of U.S. Pat. No. 5,470,307,
"use of a coherent laser light source 26 will be preferable in many
applications because the use of one or more discrete wavelengths of
light energy that can be tuned or adjusted to the particular photolytic
reaction occurring in the photolytic linker 18 will necessitate only
the minimum power (wattage) level necessary to accomplish a desired
release of the anti-mitotic compound 20. As discussed above, coherent
or laser light sources 26 are currently used in a variety of medical
procedures including diagnostic and interventional treatment, and the
wide availability of laser sources 26 and the potential for redundant
use of the same laser source 26 in photolytic release of the
therapeutic agent 20 as well as related procedures provides a
significant advantage. In addition, multiple releases of different
therapeutic agents 20 or multiple-step reactions can be accomplished
using coherent light of different wavelengths, intermediate linkages to
dye filters may be utilized to screen out or block transmission of
light energy at unused or antagonistic wavelengths (particularly
cytotoxic or cytogenic wavelengths), and secondary emitters may be
utilized to optimize the light energy at the principle wavelength of
the laser source 26. In other applications, it may be suitable to use a
light source 26 such as a flash lamp operatively connected to the
portion of the body 12 of the catheter 10 on which the substrate 16,
photolytic linker layer 18, and anti-mitotic compound20 are disposed.
One example would be a mercury flash lamp capable of producing
long-wave ultra-violet (uv) radiation within or across the 300-400
nanometer wavelength spectrum. When using either a coherent laser light
source 26 or an alternate source 26 such as a flash lamp, it is
generally preferred that the light energy be transmitted through at
least a portion of the body 12 of the catheter 10 such that the light
energy traverses a path through the substrate layer 16 to the
photolytic linker layer 18 in order to maximize the proportion of light
energy transmitted to the photolytic linker layer 18 and provide the
greatest uniformity and reproducibility in the amount of light energy
(photons) reaching the photolytic linker layer 18 from a specified
direction and nature. Optimal uniformity and reproducibility in
exposure of the photolyric linker layer 18 permits advanced techniques
such as variable release of the anti-mitotic compound 20 dependent upon
the controlled quantity of light energy incident on the substrate layer
16 and photolytic linker layer 18."
[0516] As is also disclosed in U.S. Pat. No.
5,470,307, "The art pertaining to the transmission of light energy
through fiber optic conduits 28 or other suitable transmission or
production means to the remote biophysical site is extensively
developed. For a fiber optic device, the fiber optic conduit 28
material must be selected to accommodate the wavelengths needed to
achieve release of the anti-mitotic compound 20 which will for almost
all applications be within the range of 280-400 nanometers. Suitable
fiber optic materials, connections, and light energy sources 26 may be
selected from those currently available and utilized within the
biomedical field. While fiber optic conduit 28 materials may be
selected to optimize transmission of light energy at certain selected
wavelengths for desired application, the construction of a catheter 10
including fiber optic conduit 28 materials capable of adequate
transmission throughout the range of the range of 280-400 nanometers is
preferred, since this catheter 10 would be usable with the full
compliment of photolytic release mechanisms and therapeutic agents 10.
Fabrication of the catheter 10 will therefore depend more upon
considerations involving the biomedical application or procedure by
which the catheter 10 will be introduced or implanted in the patient,
and any adjunct capabilities which the catheter 10 must possess."
[0517] By way of yet further illustration, and
referring to U.S. Pat. No. 5,599,352 (the entire disclosure of which is
hereby incorporated by reference into this specification), the
polymeric material can comprise fibrin. As is disclosed in column 4 of
such patent, "The present invention provides a stent comprising fibrin.
The term "fibrin" herein means the naturally occurring polymer of
fibrinogen that arises during blood coagulation. Blood coagulation
generally requires the participation of several plasma protein
coagulation factors: factors XII, XI, IX, X, VIII, VII, V, XIII,
prothrombin, and fibrinogen, in addition to tissue factor (factor III),
kallikrein, high molecular weight kininogen, Ca+2, and phospholipid.
The final event is the formation of an insoluble, cross-linked polymer,
fibrin, generated by the action of thrombin on fibrinogen. Fibrinogen
has three pairs of polypeptide chains (ALPHA 2-BETA 2-GAMMA 2)
covalently linked by disulfide bonds with a total molecular weight of
about 340,000. Fibrinogen is converted to fibrin through proteolysis by
thrombin. An activation peptide, fibrinopeptide A (human) is cleaved
from the amino-terminus of each ALPHA chain; fibrinopeptide B (human)
from the amino-terminus of each BETA chain. The resulting monomer
spontaneously polymerizes to a fibrin gel. Further stabilization of the
fibrin polymer to an insoluble, mechanically strong form, requires
cross-linking by factor XIII. Factor XIII is converted to XIIIa by
thrombin in the presence of Ca+2. XIIIa cross-links the GAMMA chains of
fibrin by transglutaminase activity, forming EPSILON-(GAMMA-glutamyl)
lysine cross-links. The ALPHA chains of fibrin also may be secondarily
cross-linked by transamidation."
[0518] As is also disclosed in U.S. Pat. No.
5,599,352, "Since fibrin blood clots are naturally subject to
fibrinolysis as part of the body's repair mechanism, implanted fibrin
can be rapidly biodegraded. Plasminogen is a circulating plasma protein
that is adsorbed onto the surface of the fibrin polymer. The adsorbed
plasminogen is converted to plasmin by plasminogen activator released
from the vascular endothelium. The plasmin will then break down the
fibrin into a collection of soluble peptide fragments."
[0519] As is also disclosed in U.S. Pat. No.
5,599,352, "Methods for making fibrin and forming it into implantable
devices are well known as set forth in the following patents and
published applications which are hereby incorporated by reference. In
U.S. Pat. No. 4,548,736 issued to Muller et al., fibrin is clotted by
contacting fibrinogen with a fibrinogen-coagulating protein such as
thrombin, reptilase or ancrod. Preferably, the fibrin in the
fibrin-containing stent of the present invention has Factor XIII and
calcium present during clotting, as described in U.S. Pat. No.
3,523,807 issued to Gerendas, or as described in published European
Patent Application 0366564, in order to improve the mechanical
properties and biostability of the implanted device. Also preferably,
the fibrinogen and thrombin used to make fibrin in the present
invention are from the same animal or human species as that in which
the stent of the present invention will be implanted in order to avoid
cross-species immune reactions. The resulting fibrin can also be
subjected to heat treatment at about 150.degree. C. for 2 hours in
order to reduce or eliminate antigenicity. In the Muller patent, the
fibrin product is in the form of a fine fibrin film produced by casting
the combined fibrinogen and thrombin in a film and then removing
moisture from the film osmotically through a moisture permeable
membrane. In the European Patent Application 0366564, a substrate
(preferably having high porosity or high affinity for either thrombin
or fibrinogen) is contacted with a fibrinogen solution and with a
thrombin solution. The result is a fibrin layer formed by
polymerization of fibrinogen on the surface of the device. Multiple
layers of fibrin applied by this method could provide a fibrin layer of
any desired thickness. Or, as in the Gerendas patent, the fibrin can
first be clotted and then ground into a powder which is mixed with
water and stamped into a desired shape in a heated mold. Increased
stability can also be achieved in the shaped fibrin by contacting the
fibrin with a fixing agent such as glutaraldehyde or formaldehyde.
These and other methods known by those skilled in the art for making
and forming fibrin may be used in the present invention."
[0520] As is also disclosed in U.S. Pat. No.
5,599,352, "Preferably, the fibrinogen used to make the fibrin is a
bacteria-free and virus-free fibrinogen such as that described in U.S.
Pat. No. 4,540,573 to Neurath et al which is hereby incorporated by
reference. The fibrinogen is used in solution with a concentration
between about 10 and 50 mg/ml and with a pH of about 5.8-9.0 and with
an ionic strength of about 0.05 to 0.45. The fibrinogen solution also
typically contains proteins and enzymes such as albumin, fibronectin
(0-300 .mu.g per ml fibrinogen), Factor XIII (0-20 .mu.g per ml
fibrinogen), plasminogen (0-210 .mu.g per ml fibrinogen), antiplasmin
(0-61 .mu.g per ml fibrinogen) and Antithrombin III (0-150 .mu.g per ml
fibrinogen). The thrombin solution added to make the fibrin is
typically at a concentration of 1 to 120 NIH units/ml with a preferred
concentration of calcium ions between about 0.02 and 0.2M."
[0521] As is also disclosed in U.S. Pat. No.
5,599,352, "Polymeric materials can also be intermixed in a blend or
co-polymer with the fibrin to produce a material with the desired
properties of fibrin with improved structural strength. For example,
the polyurethane material described in the article by Soldani et at.,
"Bioartificial Polymeric Materials Obtained from Blends of Synthetic
Polymers with Fibrin and Collagen" International Journal of Artificial
Organs, Vol.14, No. 5, 1991, which is incorporated herein by reference,
could be sprayed onto a suitable stent structure. Suitable polymers
could also be biodegradable polymers such as polyphosphate ester,
polyhydroxybutyrate valerate, polyhydroxybutyrate-co-hydroxyvalerate
and the like . . . " The polymeric material 14 may be, e.g., a blend of
fibrin and another polymeric material.
[0522] As is also disclosed in U.S. Pat. No.
5,599,352, "The shape for the fibrin can be provided by molding
processes. For example, the mixture can be formed into a stent having
essentially the same shape as the stent shown in U.S. Pat. No.
4,886,062 issued to Wiktor. Unlike the method for making the stent
disclosed in Wiktor which is wound from a wire, the stent made with
fibrin can be directly molded into the desired open-ended tubular
shape."
[0523] As is also disclosed in U.S. Pat. No.
5,599,352, "In U.S. Pat. No. 4,548,736 issued to Muller et al., a dense
fibrin composition is disclosed which can be a bioabsorbable matrix for
delivery of drugs to a patient. Such a fibrin composition can also be
used in the present invention by incorporating a drug or other
therapeutic substance useful in diagnosis or treatment of body lumens
to the fibrin provided on the stent. The drug, fibrin and stent can
then be delivered to the portion of the body lumen to be treated where
the drug may elute to affect the course of restenosis in surrounding
luminal tissue. Examples of drugs that are thought to be useful in the
treatment of restenosis are disclosed in published international patent
application WO9112779 "Intraluminal Drug Eluting Prosthesis" which is
incorporated herein by reference. Therefore, useful drugs for treatment
of restenosis and drugs that can be incorporated in the fibrin and used
in the present invention can include drugs such as anticoagulant drugs,
antiplatelet drugs, antimetabolite drugs, anti-inflammatory drugs and
antimitotic drugs. Further, other vasoreactive agents such as